RNA–Protein interactions for RNA: ENST00000593641.3

SSBP4-203, Transcript of single stranded DNA binding protein 4, humanhuman

TSL 5

Gene SSBP4, Length 900 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP4-203ENST00000593641 ZNF26P17031 533 aaPredicted RBP19.01■□□□□ 0.63
SSBP4-203ENST00000593641 MTNR1AP48039 350 aa19.01■□□□□ 0.63
SSBP4-203ENST00000593641 SRP9P49458 86 aaKnown RBP19.01■□□□□ 0.63
SSBP4-203ENST00000593641 OTPQ5XKR4 325 aa19.01■□□□□ 0.63
SSBP4-203ENST00000593641 GPR139Q6DWJ6 353 aa19.01■□□□□ 0.63
SSBP4-203ENST00000593641 CBLL1Q75N03 491 aa19.01■□□□□ 0.63
SSBP4-203ENST00000593641 PARP8Q8N3A8 854 aa19.01■□□□□ 0.63
SSBP4-203ENST00000593641 OR13G1Q8NGZ3 307 aa19.01■□□□□ 0.63
SSBP4-203ENST00000593641 ZNF420Q8TAQ5 688 aaPredicted RBP19.01■□□□□ 0.63
SSBP4-203ENST00000593641 FAM46AQ96IP4 442 aaKnown RBP19.01■□□□□ 0.63
SSBP4-203ENST00000593641 HSH2DQ96JZ2 352 aa19.01■□□□□ 0.63
SSBP4-203ENST00000593641 C1orf147Q96MC9 270 aaPredicted RBP19.01■□□□□ 0.63
SSBP4-203ENST00000593641 ZNF582Q96NG8 517 aaPredicted RBP19.01■□□□□ 0.63
SSBP4-203ENST00000593641 PTTG3PQ9NZH4 202 aa19.01■□□□□ 0.63
SSBP4-203ENST00000593641 COA3Q9Y2R0 106 aaPredicted RBP19.01■□□□□ 0.63
SSBP4-203ENST00000593641 DBHP09172 617 aa19■□□□□ 0.63
SSBP4-203ENST00000593641 WNT2P09544 360 aa19■□□□□ 0.63
SSBP4-203ENST00000593641 GNB2P62879 340 aa19■□□□□ 0.63
SSBP4-203ENST00000593641 IL13RA1P78552 427 aa19■□□□□ 0.63
SSBP4-203ENST00000593641 LIPEQ05469 1076 aa19■□□□□ 0.63
SSBP4-203ENST00000593641 PAX8Q06710 450 aa19■□□□□ 0.63
SSBP4-203ENST00000593641 HLXQ14774 488 aaPredicted RBP19■□□□□ 0.63
SSBP4-203ENST00000593641 CCDC92Q53HC0 331 aaPredicted RBP19■□□□□ 0.63
SSBP4-203ENST00000593641 OR2T2Q6IF00 324 aa19■□□□□ 0.63
SSBP4-203ENST00000593641 LRRN1Q6UXK5 716 aa19■□□□□ 0.63
SSBP4-203ENST00000593641 FBXW12Q6X9E4 464 aa19■□□□□ 0.63
SSBP4-203ENST00000593641 ADCK1Q86TW2 530 aa19■□□□□ 0.63
SSBP4-203ENST00000593641 OR8G5Q8NG78 346 aa19■□□□□ 0.63
SSBP4-203ENST00000593641 APOBEC3DQ96AK3 386 aaPredicted RBP19■□□□□ 0.63
SSBP4-203ENST00000593641 PLEKHA8Q96JA3 519 aa19■□□□□ 0.63
SSBP4-203ENST00000593641 MEGF10Q96KG7 1140 aa19■□□□□ 0.63
SSBP4-203ENST00000593641 UNKLQ9H9P5 680 aaKnown RBP19■□□□□ 0.63
SSBP4-203ENST00000593641 LRRC30A6NM36 301 aa18.99■□□□□ 0.63
SSBP4-203ENST00000593641 CLDN34H7C241 214 aa18.99■□□□□ 0.63
SSBP4-203ENST00000593641 SLC22A2O15244 555 aa18.99■□□□□ 0.63
SSBP4-203ENST00000593641 RER1O15258 196 aa18.99■□□□□ 0.63
SSBP4-203ENST00000593641 CYB5R3P00387 301 aaPredicted RBP18.99■□□□□ 0.63
SSBP4-203ENST00000593641 SERPINA1P01009 418 aa18.99■□□□□ 0.63
SSBP4-203ENST00000593641 PPIAL4GP0DN37 164 aa18.99■□□□□ 0.63
SSBP4-203ENST00000593641 CD80P33681 288 aa18.99■□□□□ 0.63
SSBP4-203ENST00000593641 KLBQ86Z14 1044 aa18.99■□□□□ 0.63
SSBP4-203ENST00000593641 SLC15A3Q8IY34 581 aa18.99■□□□□ 0.63
SSBP4-203ENST00000593641 POU5F2Q8N7G0 328 aa18.99■□□□□ 0.63
SSBP4-203ENST00000593641 SLC7A13Q8TCU3 470 aa18.99■□□□□ 0.63
SSBP4-203ENST00000593641 NRIP3Q9NQ35 241 aa18.99■□□□□ 0.63
SSBP4-203ENST00000593641 VSX1Q9NZR4 365 aaPredicted RBP18.99■□□□□ 0.63
SSBP4-203ENST00000593641 GMPR2Q9P2T1 348 aaKnown RBP18.99■□□□□ 0.63
SSBP4-203ENST00000593641 MIOXQ9UGB7 285 aa18.99■□□□□ 0.63
SSBP4-203ENST00000593641 IGHV3OR16-10A0A075B7F0 116 aa18.98■□□□□ 0.63
SSBP4-203ENST00000593641 SOCS2O14508 198 aa18.98■□□□□ 0.63
SSBP4-203ENST00000593641 KCNAB3O43448 404 aa18.98■□□□□ 0.63
SSBP4-203ENST00000593641 ZNF205O95201 554 aa18.98■□□□□ 0.63
SSBP4-203ENST00000593641 IGHV4-38-2P0DP08 117 aa18.98■□□□□ 0.63
SSBP4-203ENST00000593641 CGB2Q6NT52 195 aa18.98■□□□□ 0.63
SSBP4-203ENST00000593641 PGM2L1Q6PCE3 622 aa18.98■□□□□ 0.63
SSBP4-203ENST00000593641 NLRC3Q7RTR2 1065 aa18.98■□□□□ 0.63
SSBP4-203ENST00000593641 C1orf87Q8N0U7 546 aa18.98■□□□□ 0.63
SSBP4-203ENST00000593641 GJC3Q8NFK1 279 aa18.98■□□□□ 0.63
SSBP4-203ENST00000593641 GPX7Q96SL4 187 aaPredicted RBP18.98■□□□□ 0.63
SSBP4-203ENST00000593641 NUAK2Q9H093 628 aa18.98■□□□□ 0.63
SSBP4-203ENST00000593641 HDHD2Q9H0R4 259 aa18.98■□□□□ 0.63
SSBP4-203ENST00000593641 TMEM165Q9HC07 324 aa18.98■□□□□ 0.63
SSBP4-203ENST00000593641 KRCC1Q9NPI7 259 aaPredicted RBP18.98■□□□□ 0.63
SSBP4-203ENST00000593641 ARMCX1Q9P291 453 aa18.98■□□□□ 0.63
SSBP4-203ENST00000593641 SIGLEC7Q9Y286 467 aa18.98■□□□□ 0.63
SSBP4-203ENST00000593641 ENPP4Q9Y6X5 453 aa18.98■□□□□ 0.63
SSBP4-203ENST00000593641 TRAV40A0A0B4J280 105 aa18.97■□□□□ 0.63
SSBP4-203ENST00000593641 IGHV2-70DA0A0C4DH43 119 aa18.97■□□□□ 0.63
SSBP4-203ENST00000593641 CENPAP49450 140 aa18.97■□□□□ 0.63
SSBP4-203ENST00000593641 RPS6KA3P51812 740 aa18.97■□□□□ 0.63
SSBP4-203ENST00000593641 SLC9A3R2Q15599 337 aa18.97■□□□□ 0.63
SSBP4-203ENST00000593641 FGD3Q5JSP0 725 aa18.97■□□□□ 0.63
SSBP4-203ENST00000593641 LEG1Q6P5S2 330 aa18.97■□□□□ 0.63
SSBP4-203ENST00000593641 DNM1P34Q6PK57 102 aa18.97■□□□□ 0.63
SSBP4-203ENST00000593641 C9orf139Q6ZV77 190 aa18.97■□□□□ 0.63
SSBP4-203ENST00000593641 ZSCAN2Q7Z7L9 614 aaPredicted RBP18.97■□□□□ 0.63
SSBP4-203ENST00000593641 BHLHE23Q8NDY6 225 aa18.97■□□□□ 0.63
SSBP4-203ENST00000593641 OR8B3Q8NGG8 313 aa18.97■□□□□ 0.63
SSBP4-203ENST00000593641 RP9Q8TA86 221 aaKnown RBP18.97■□□□□ 0.63
SSBP4-203ENST00000593641 RAB40AQ8WXH6 277 aa18.97■□□□□ 0.63
SSBP4-203ENST00000593641 FAM162AQ96A26 154 aa18.97■□□□□ 0.63
SSBP4-203ENST00000593641 UPRTQ96BW1 309 aa18.97■□□□□ 0.63
SSBP4-203ENST00000593641 NEIL1Q96FI4 390 aaPredicted RBP18.97■□□□□ 0.63
SSBP4-203ENST00000593641 OR8B2Q96RD0 313 aa18.97■□□□□ 0.63
SSBP4-203ENST00000593641 COQ7Q99807 217 aa18.97■□□□□ 0.63
SSBP4-203ENST00000593641 FAM32AQ9Y421 112 aaKnown RBP18.97■□□□□ 0.63
SSBP4-203ENST00000593641 IER3IP1Q9Y5U9 82 aa18.97■□□□□ 0.63
SSBP4-203ENST00000593641 POM121CA8CG34 1229 aa18.96■□□□□ 0.63
SSBP4-203ENST00000593641 IQCF6A8MYZ5 107 aa18.96■□□□□ 0.63
SSBP4-203ENST00000593641 IMPA2O14732 288 aa18.96■□□□□ 0.63
SSBP4-203ENST00000593641 PTP4A3O75365 173 aa18.96■□□□□ 0.63
SSBP4-203ENST00000593641 H1F0P07305 194 aaKnown RBP18.96■□□□□ 0.63
SSBP4-203ENST00000593641 IRF2P14316 349 aa18.96■□□□□ 0.63
SSBP4-203ENST00000593641 CRABP1P29762 137 aa18.96■□□□□ 0.63
SSBP4-203ENST00000593641 SLC7A2P52569 658 aa18.96■□□□□ 0.63
SSBP4-203ENST00000593641 PAX2Q02962 417 aa18.96■□□□□ 0.63
SSBP4-203ENST00000593641 KCNMB1Q16558 191 aa18.96■□□□□ 0.63
SSBP4-203ENST00000593641 ZNF181Q2M3W8 571 aa18.96■□□□□ 0.63
SSBP4-203ENST00000593641 PTCHD4Q6ZW05 846 aa18.96■□□□□ 0.63
SSBP4-203ENST00000593641 MOGAT3Q86VF5 341 aa18.96■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms