RNA–Protein interactions for RNA: ENST00000593280.2

NPC1-214, Transcript of NPC intracellular cholesterol transporter 1, humanhuman

TSL 1 (best)

Gene NPC1, Length 1,607 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPC1-214ENST00000593280 NABP1Q96AH0 204 aa10.55□□□□□ -0.72
NPC1-214ENST00000593280 HDHD2Q9H0R4 259 aa10.55□□□□□ -0.72
NPC1-214ENST00000593280 PNRC2Q9NPJ4 139 aaKnown RBP10.55□□□□□ -0.72
NPC1-214ENST00000593280 TAS2R4Q9NYW5 299 aa10.55□□□□□ -0.72
NPC1-214ENST00000593280 NUFIP1Q9UHK0 495 aaKnown RBP10.55□□□□□ -0.72
NPC1-214ENST00000593280 FOXJ3Q9UPW0 622 aa10.55□□□□□ -0.72
NPC1-214ENST00000593280 ETV7Q9Y603 341 aa10.55□□□□□ -0.72
NPC1-214ENST00000593280 KNTC1P50748 2209 aa10.54□□□□□ -0.72
NPC1-214ENST00000593280 TTLL8A6PVC2 850 aa10.54□□□□□ -0.72
NPC1-214ENST00000593280 ACOT7O00154 380 aa10.54□□□□□ -0.72
NPC1-214ENST00000593280 TM4SF5O14894 197 aa10.54□□□□□ -0.72
NPC1-214ENST00000593280 UBL3O95164 117 aa10.54□□□□□ -0.72
NPC1-214ENST00000593280 SYNGR4O95473 234 aa10.54□□□□□ -0.72
NPC1-214ENST00000593280 TTRP02766 147 aa10.54□□□□□ -0.72
NPC1-214ENST00000593280 ACSM4P0C7M7 580 aa10.54□□□□□ -0.72
NPC1-214ENST00000593280 ZNF708P17019 499 aa10.54□□□□□ -0.72
NPC1-214ENST00000593280 RFX2P48378 723 aa10.54□□□□□ -0.72
NPC1-214ENST00000593280 CX3CR1P49238 355 aa10.54□□□□□ -0.72
NPC1-214ENST00000593280 MRPS34P82930 218 aaKnown RBP10.54□□□□□ -0.72
NPC1-214ENST00000593280 SRYQ05066 204 aa10.54□□□□□ -0.72
NPC1-214ENST00000593280 ENDOGQ14249 297 aaKnown RBP10.54□□□□□ -0.72
NPC1-214ENST00000593280 LUZP2Q86TE4 346 aa10.54□□□□□ -0.72
NPC1-214ENST00000593280 CMTM4Q8IZR5 234 aa10.54□□□□□ -0.72
NPC1-214ENST00000593280 GPR137CQ8N3F9 429 aa10.54□□□□□ -0.72
NPC1-214ENST00000593280 ZFP62Q8NB50 900 aaPredicted RBP10.54□□□□□ -0.72
NPC1-214ENST00000593280 TMEM178AQ8NBL3 297 aa10.54□□□□□ -0.72
NPC1-214ENST00000593280 GJC3Q8NFK1 279 aa10.54□□□□□ -0.72
NPC1-214ENST00000593280 ABHD3Q8WU67 409 aa10.54□□□□□ -0.72
NPC1-214ENST00000593280 HAS2Q92819 552 aa10.54□□□□□ -0.72
NPC1-214ENST00000593280 RFT1Q96AA3 541 aa10.54□□□□□ -0.72
NPC1-214ENST00000593280 SCMH1Q96GD3 660 aa10.54□□□□□ -0.72
NPC1-214ENST00000593280 C11orf54Q9H0W9 315 aaPredicted RBP10.54□□□□□ -0.72
NPC1-214ENST00000593280 ZNF552Q9H707 407 aaPredicted RBP10.54□□□□□ -0.72
NPC1-214ENST00000593280 RABL2AQ9UBK7 228 aaPredicted RBP10.54□□□□□ -0.72
NPC1-214ENST00000593280 OR5V1Q9UGF6 321 aa10.54□□□□□ -0.72
NPC1-214ENST00000593280 STEAP1Q9UHE8 339 aa10.54□□□□□ -0.72
NPC1-214ENST00000593280 MED13Q9UHV7 2174 aa10.54□□□□□ -0.72
NPC1-214ENST00000593280 RABL2BQ9UNT1 228 aa10.54□□□□□ -0.72
NPC1-214ENST00000593280 CAMK2AQ9UQM7 478 aa10.54□□□□□ -0.72
NPC1-214ENST00000593280 ZFHX4Q86UP3 3567 aa10.53□□□□□ -0.72
NPC1-214ENST00000593280 HNRNPCP07910 306 aaKnown RBP eCLIP10.53□□□□□ -0.72
NPC1-214ENST00000593280 IGFBP3P17936 291 aaPredicted RBP10.53□□□□□ -0.72
NPC1-214ENST00000593280 CFPP27918 469 aa10.53□□□□□ -0.72
NPC1-214ENST00000593280 PRKXP51817 358 aa10.53□□□□□ -0.72
NPC1-214ENST00000593280 SCAND1P57086 179 aa10.53□□□□□ -0.72
NPC1-214ENST00000593280 ZNF121P58317 390 aaPredicted RBP10.53□□□□□ -0.72
NPC1-214ENST00000593280 ZNF57Q68EA5 555 aaPredicted RBP10.53□□□□□ -0.72
NPC1-214ENST00000593280 ASPHD2Q6ICH7 369 aa10.53□□□□□ -0.72
NPC1-214ENST00000593280 MZT2BQ6NZ67 158 aa10.53□□□□□ -0.72
NPC1-214ENST00000593280 PNPLA5Q7Z6Z6 429 aaPredicted RBP10.53□□□□□ -0.72
NPC1-214ENST00000593280 CADM3Q8N126 398 aa10.53□□□□□ -0.72
NPC1-214ENST00000593280 LRRC18Q8N456 261 aa10.53□□□□□ -0.72
NPC1-214ENST00000593280 FAM109AQ8N4B1 249 aa10.53□□□□□ -0.72
NPC1-214ENST00000593280 ZNF283Q8N7M2 679 aa10.53□□□□□ -0.72
NPC1-214ENST00000593280 TMEM45BQ96B21 275 aa10.53□□□□□ -0.72
NPC1-214ENST00000593280 SLC25A38Q96DW6 304 aa10.53□□□□□ -0.72
NPC1-214ENST00000593280 DDX28Q9NUL7 540 aaKnown RBP10.53□□□□□ -0.72
NPC1-214ENST00000593280 PAQR5Q9NXK6 330 aaPredicted RBP10.53□□□□□ -0.72
NPC1-214ENST00000593280 ETAA1Q9NY74 926 aa10.53□□□□□ -0.72
NPC1-214ENST00000593280 DLL3Q9NYJ7 618 aa10.53□□□□□ -0.72
NPC1-214ENST00000593280 CACNA1CQ13936 2221 aa10.53□□□□□ -0.72
NPC1-214ENST00000593280 ASPMQ8IZT6 3477 aa10.52□□□□□ -0.73
NPC1-214ENST00000593280 IGKV3D-15A0A087WSY6 115 aa10.52□□□□□ -0.73
NPC1-214ENST00000593280 A0A1B0GVI7 797 aa10.52□□□□□ -0.73
NPC1-214ENST00000593280 PLA2G10O15496 165 aa10.52□□□□□ -0.73
NPC1-214ENST00000593280 EEF1E1O43324 174 aaKnown RBP10.52□□□□□ -0.73
NPC1-214ENST00000593280 SYT7O43581 403 aa10.52□□□□□ -0.73
NPC1-214ENST00000593280 ACTL6AO96019 429 aa10.52□□□□□ -0.73
NPC1-214ENST00000593280 WT1P19544 449 aaPredicted RBP10.52□□□□□ -0.73
NPC1-214ENST00000593280 NTF4P34130 210 aa10.52□□□□□ -0.73
NPC1-214ENST00000593280 MAP2K3P46734 347 aa10.52□□□□□ -0.73
NPC1-214ENST00000593280 CCL11P51671 97 aa10.52□□□□□ -0.73
NPC1-214ENST00000593280 SLC10A1Q14973 349 aa10.52□□□□□ -0.73
NPC1-214ENST00000593280 RAB11BQ15907 218 aa10.52□□□□□ -0.73
NPC1-214ENST00000593280 BCL2A1Q16548 175 aa10.52□□□□□ -0.73
NPC1-214ENST00000593280 GLT8D1Q68CQ7 371 aa10.52□□□□□ -0.73
NPC1-214ENST00000593280 SYNPRQ8TBG9 265 aa10.52□□□□□ -0.73
NPC1-214ENST00000593280 ENKURQ8TC29 256 aa10.52□□□□□ -0.73
NPC1-214ENST00000593280 CPT1CQ8TCG5 803 aa10.52□□□□□ -0.73
NPC1-214ENST00000593280 RAB40AQ8WXH6 277 aa10.52□□□□□ -0.73
NPC1-214ENST00000593280 TRIM63Q969Q1 353 aa10.52□□□□□ -0.73
NPC1-214ENST00000593280 NEDD4LQ96PU5 975 aa10.52□□□□□ -0.73
NPC1-214ENST00000593280 ALKBH3Q96Q83 286 aaPredicted RBP10.52□□□□□ -0.73
NPC1-214ENST00000593280 ABHD1Q96SE0 405 aa10.52□□□□□ -0.73
NPC1-214ENST00000593280 THAP7Q9BT49 309 aaPredicted RBP10.52□□□□□ -0.73
NPC1-214ENST00000593280 CRLF2Q9HC73 371 aa10.52□□□□□ -0.73
NPC1-214ENST00000593280 ACKR4Q9NPB9 350 aa10.52□□□□□ -0.73
NPC1-214ENST00000593280 EMC3Q9P0I2 261 aa10.52□□□□□ -0.73
NPC1-214ENST00000593280 CDV3Q9UKY7 258 aaKnown RBP10.52□□□□□ -0.73
NPC1-214ENST00000593280 MCTS1Q9ULC4 181 aaKnown RBP10.52□□□□□ -0.73
NPC1-214ENST00000593280 MRPS7Q9Y2R9 242 aaKnown RBP10.52□□□□□ -0.73
NPC1-214ENST00000593280 CELSR3Q9NYQ7 3312 aa10.52□□□□□ -0.73
NPC1-214ENST00000593280 MEGF11A6BM72 1044 aa10.51□□□□□ -0.73
NPC1-214ENST00000593280 ZNF891A8MT65 544 aaPredicted RBP10.51□□□□□ -0.73
NPC1-214ENST00000593280 SLC17A2O00624 439 aa10.51□□□□□ -0.73
NPC1-214ENST00000593280 LYRM1O43325 122 aa10.51□□□□□ -0.73
NPC1-214ENST00000593280 LMX1BO60663 402 aa10.51□□□□□ -0.73
NPC1-214ENST00000593280 ITGB2P05107 769 aa10.51□□□□□ -0.73
NPC1-214ENST00000593280 ADRB1P08588 477 aa10.51□□□□□ -0.73
NPC1-214ENST00000593280 TNFSF10P50591 281 aa10.51□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms