RNA–Protein interactions for RNA: ENST00000593093.5

CIRBP-242, Transcript of cold inducible RNA binding protein, human

TSL 2

Gene CIRBP, Length 3,528 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CIRBP-242	ENST00000593093	SDCBP	O00560	298 aa	Predicted RBP	12.85	□□□□□ -0.35
CIRBP-242	ENST00000593093	PRH1	P02810	166 aa		12.85	□□□□□ -0.35
CIRBP-242	ENST00000593093	S100A8	P05109	93 aa		12.85	□□□□□ -0.35
CIRBP-242	ENST00000593093	RCC1	P18754	421 aa	Predicted RBP	12.85	□□□□□ -0.35
CIRBP-242	ENST00000593093	S1PR1	P21453	382 aa		12.85	□□□□□ -0.35
CIRBP-242	ENST00000593093	RTN4RL2	Q86UN3	420 aa		12.85	□□□□□ -0.35
CIRBP-242	ENST00000593093	C7orf61	Q8IZ16	206 aa		12.85	□□□□□ -0.35
CIRBP-242	ENST00000593093	C4orf45	Q96LM5	186 aa		12.85	□□□□□ -0.35
CIRBP-242	ENST00000593093	TOX2	Q96NM4	488 aa		12.85	□□□□□ -0.35
CIRBP-242	ENST00000593093	ADO	Q96SZ5	270 aa		12.85	□□□□□ -0.35
CIRBP-242	ENST00000593093	KLK13	Q9UKR3	277 aa		12.85	□□□□□ -0.35
CIRBP-242	ENST00000593093	COL4A3	Q01955	1670 aa		12.85	□□□□□ -0.35
CIRBP-242	ENST00000593093	KIF26B	Q2KJY2	2108 aa		12.85	□□□□□ -0.35
CIRBP-242	ENST00000593093	hCG_1809904	A0A1W2PP81	198 aa		12.84	□□□□□ -0.35
CIRBP-242	ENST00000593093		A0A1W2PR64	198 aa		12.84	□□□□□ -0.35
CIRBP-242	ENST00000593093		A0A1W2PRV1	198 aa		12.84	□□□□□ -0.35
CIRBP-242	ENST00000593093	SERINC4	A6NH21	518 aa		12.84	□□□□□ -0.35
CIRBP-242	ENST00000593093	MSGN1	A6NI15	193 aa		12.84	□□□□□ -0.35
CIRBP-242	ENST00000593093	SLC17A2	O00624	439 aa		12.84	□□□□□ -0.35
CIRBP-242	ENST00000593093	ARG1	P05089	322 aa		12.84	□□□□□ -0.35
CIRBP-242	ENST00000593093	ITGB2	P05107	769 aa		12.84	□□□□□ -0.35
CIRBP-242	ENST00000593093	CXCR1	P25024	350 aa		12.84	□□□□□ -0.35
CIRBP-242	ENST00000593093	C1orf61	Q13536	156 aa		12.84	□□□□□ -0.35
CIRBP-242	ENST00000593093	FHL1	Q13642	323 aa		12.84	□□□□□ -0.35
CIRBP-242	ENST00000593093	NCMAP	Q5T1S8	102 aa		12.84	□□□□□ -0.35
CIRBP-242	ENST00000593093	LYG2	Q86SG7	212 aa		12.84	□□□□□ -0.35
CIRBP-242	ENST00000593093	OOSP2	Q86WS3	158 aa		12.84	□□□□□ -0.35
CIRBP-242	ENST00000593093	OR13C8	Q8NGS7	320 aa		12.84	□□□□□ -0.35
CIRBP-242	ENST00000593093	GPX8	Q8TED1	209 aa		12.84	□□□□□ -0.35
CIRBP-242	ENST00000593093	OR2M4	Q96R27	311 aa		12.84	□□□□□ -0.35
CIRBP-242	ENST00000593093	OR2A5	Q96R48	311 aa		12.84	□□□□□ -0.35
CIRBP-242	ENST00000593093	BARX1	Q9HBU1	254 aa	Predicted RBP	12.84	□□□□□ -0.35
CIRBP-242	ENST00000593093	FRMPD3	Q5JV73	1810 aa		12.84	□□□□□ -0.35
CIRBP-242	ENST00000593093		A0A087WUJ7	227 aa		12.84	□□□□□ -0.35
CIRBP-242	ENST00000593093	C9orf170	A2RU37	121 aa		12.84	□□□□□ -0.35
CIRBP-242	ENST00000593093		A6NLC8	198 aa		12.84	□□□□□ -0.35
CIRBP-242	ENST00000593093	TACR3	P29371	465 aa		12.84	□□□□□ -0.35
CIRBP-242	ENST00000593093	F2RL1	P55085	397 aa		12.84	□□□□□ -0.35
CIRBP-242	ENST00000593093	MFGE8	Q08431	387 aa	Predicted RBP	12.84	□□□□□ -0.35
CIRBP-242	ENST00000593093	RASGEF1B	Q0VAM2	473 aa		12.84	□□□□□ -0.35
CIRBP-242	ENST00000593093	TMEM225	Q6GV28	225 aa		12.84	□□□□□ -0.35
CIRBP-242	ENST00000593093	RNASE11	Q8TAA1	199 aa	Known RBP	12.84	□□□□□ -0.35
CIRBP-242	ENST00000593093	NPRL2	Q8WTW4	380 aa		12.84	□□□□□ -0.35
CIRBP-242	ENST00000593093	SECTM1	Q8WVN6	248 aa		12.84	□□□□□ -0.35
CIRBP-242	ENST00000593093	APOO	Q9BUR5	198 aa		12.84	□□□□□ -0.35
CIRBP-242	ENST00000593093	ST6GALNAC5	Q9BVH7	336 aa		12.84	□□□□□ -0.35
CIRBP-242	ENST00000593093		A0A1W2PPC1	479 aa		12.84	□□□□□ -0.35
CIRBP-242	ENST00000593093	TERT	O14746	1132 aa	Known RBP	12.84	□□□□□ -0.35
CIRBP-242	ENST00000593093	NR0B1	P51843	470 aa	Known RBP	12.84	□□□□□ -0.35
CIRBP-242	ENST00000593093	RNF4	P78317	190 aa		12.84	□□□□□ -0.35
CIRBP-242	ENST00000593093	ZP2	Q05996	745 aa		12.84	□□□□□ -0.35
CIRBP-242	ENST00000593093	TOMM20	Q15388	145 aa		12.84	□□□□□ -0.35
CIRBP-242	ENST00000593093	PDZD11	Q5EBL8	140 aa		12.84	□□□□□ -0.35
CIRBP-242	ENST00000593093	SLC35D3	Q5M8T2	416 aa		12.84	□□□□□ -0.35
CIRBP-242	ENST00000593093	NAXE	Q8NCW5	288 aa		12.84	□□□□□ -0.35
CIRBP-242	ENST00000593093	OR10H5	Q8NGA6	315 aa		12.84	□□□□□ -0.35
CIRBP-242	ENST00000593093	DGAT2	Q96PD7	388 aa		12.84	□□□□□ -0.35
CIRBP-242	ENST00000593093	GPER1	Q99527	375 aa		12.84	□□□□□ -0.35
CIRBP-242	ENST00000593093	FAM117A	Q9C073	453 aa		12.84	□□□□□ -0.35
CIRBP-242	ENST00000593093	POLR1D	Q9Y2S0	133 aa		12.84	□□□□□ -0.35
CIRBP-242	ENST00000593093	FREM3	P0C091	2139 aa		12.83	□□□□□ -0.35
CIRBP-242	ENST00000593093	MEX3A	A1L020	520 aa	Known RBP	12.83	□□□□□ -0.36
CIRBP-242	ENST00000593093	HCRTR1	O43613	425 aa		12.83	□□□□□ -0.36
CIRBP-242	ENST00000593093	EIF4E2	O60573	245 aa	Known RBP	12.83	□□□□□ -0.36
CIRBP-242	ENST00000593093	KAT7	O95251	611 aa		12.83	□□□□□ -0.36
CIRBP-242	ENST00000593093	MPIG6B	O95866	241 aa		12.83	□□□□□ -0.36
CIRBP-242	ENST00000593093	SFTPC	P11686	197 aa		12.83	□□□□□ -0.36
CIRBP-242	ENST00000593093	ALOX5AP	P20292	161 aa		12.83	□□□□□ -0.36
CIRBP-242	ENST00000593093	CD1C	P29017	333 aa		12.83	□□□□□ -0.36
CIRBP-242	ENST00000593093	OR51F2	Q8NH61	342 aa		12.83	□□□□□ -0.36
CIRBP-242	ENST00000593093	FGGY	Q96C11	551 aa		12.83	□□□□□ -0.36
CIRBP-242	ENST00000593093	KLHDC3	Q9BQ90	382 aa		12.83	□□□□□ -0.36
CIRBP-242	ENST00000593093	SUCNR1	Q9BXA5	334 aa		12.83	□□□□□ -0.36
CIRBP-242	ENST00000593093	LAT2	Q9GZY6	243 aa		12.83	□□□□□ -0.36
CIRBP-242	ENST00000593093	RGCC	Q9H4X1	137 aa		12.83	□□□□□ -0.36
CIRBP-242	ENST00000593093	ARHGEF17	Q96PE2	2063 aa	Predicted RBP	12.83	□□□□□ -0.36
CIRBP-242	ENST00000593093	EFEMP2	O95967	443 aa		12.83	□□□□□ -0.36
CIRBP-242	ENST00000593093	OPN1LW	P04000	364 aa		12.83	□□□□□ -0.36
CIRBP-242	ENST00000593093	PRF1	P14222	555 aa		12.83	□□□□□ -0.36
CIRBP-242	ENST00000593093	RAB2A	P61019	212 aa		12.83	□□□□□ -0.36
CIRBP-242	ENST00000593093	ARMC6	Q6NXE6	501 aa		12.83	□□□□□ -0.36
CIRBP-242	ENST00000593093	MAMDC2	Q7Z304	686 aa	Predicted RBP	12.83	□□□□□ -0.36
CIRBP-242	ENST00000593093	YAF2	Q8IY57	180 aa		12.83	□□□□□ -0.36
CIRBP-242	ENST00000593093	OR5D18	Q8NGL1	313 aa		12.83	□□□□□ -0.36
CIRBP-242	ENST00000593093	OR4A4P	Q8NGN8	299 aa		12.83	□□□□□ -0.36
CIRBP-242	ENST00000593093	OR1E3	Q8WZA6	343 aa		12.83	□□□□□ -0.36
CIRBP-242	ENST00000593093	PRRT1	Q99946	306 aa		12.83	□□□□□ -0.36
CIRBP-242	ENST00000593093	BANF2	Q9H503	90 aa		12.83	□□□□□ -0.36
CIRBP-242	ENST00000593093	TMEM14A	Q9Y6G1	99 aa		12.83	□□□□□ -0.36
CIRBP-242	ENST00000593093	RNASEK-C17orf49	H0YIS7	233 aa		12.83	□□□□□ -0.36
CIRBP-242	ENST00000593093	AK1	P00568	194 aa		12.83	□□□□□ -0.36
CIRBP-242	ENST00000593093	SLC2A1	P11166	492 aa		12.83	□□□□□ -0.36
CIRBP-242	ENST00000593093	OR3A2	P47893	321 aa		12.83	□□□□□ -0.36
CIRBP-242	ENST00000593093	RPP30	P78346	268 aa	Known RBP	12.83	□□□□□ -0.36
CIRBP-242	ENST00000593093	MEST	Q5EB52	335 aa		12.83	□□□□□ -0.36
CIRBP-242	ENST00000593093	AGBL4	Q5VU57	503 aa		12.83	□□□□□ -0.36
CIRBP-242	ENST00000593093	SLC22A18	Q96BI1	424 aa		12.83	□□□□□ -0.36
CIRBP-242	ENST00000593093	PIK3IP1	Q96FE7	263 aa		12.83	□□□□□ -0.36
CIRBP-242	ENST00000593093	STAC	Q99469	402 aa		12.83	□□□□□ -0.36
CIRBP-242	ENST00000593093	PIGQ	Q9BRB3	760 aa		12.83	□□□□□ -0.36

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