RNA–Protein interactions for RNA: ENST00000590499.1

SMAD4-211, Transcript of SMAD family member 4, humanhuman

TSL 4

Gene SMAD4, Length 545 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-211ENST00000590499 ERCC1P07992 297 aaPredicted RBP9.57□□□□□ -0.88
SMAD4-211ENST00000590499 DAOP14920 347 aa9.57□□□□□ -0.88
SMAD4-211ENST00000590499 HOXB6P17509 224 aaKnown RBP9.57□□□□□ -0.88
SMAD4-211ENST00000590499 USF1P22415 310 aaPredicted RBP9.57□□□□□ -0.88
SMAD4-211ENST00000590499 NR4A2P43354 598 aa9.57□□□□□ -0.88
SMAD4-211ENST00000590499 HTR5AP47898 357 aa9.57□□□□□ -0.88
SMAD4-211ENST00000590499 KHDRBS1Q07666 443 aaKnown RBP eCLIP9.57□□□□□ -0.88
SMAD4-211ENST00000590499 RIN1Q13671 783 aa9.57□□□□□ -0.88
SMAD4-211ENST00000590499 FLOT2Q14254 428 aa9.57□□□□□ -0.88
SMAD4-211ENST00000590499 TMEM249Q2WGJ8 235 aa9.57□□□□□ -0.88
SMAD4-211ENST00000590499 CCDC92Q53HC0 331 aaPredicted RBP9.57□□□□□ -0.88
SMAD4-211ENST00000590499 ELFN2Q5R3F8 820 aa9.57□□□□□ -0.88
SMAD4-211ENST00000590499 DNM1P34Q6PK57 102 aa9.57□□□□□ -0.88
SMAD4-211ENST00000590499 CD300LDQ6UXZ3 194 aa9.57□□□□□ -0.88
SMAD4-211ENST00000590499 TMEM179BQ7Z7N9 219 aa9.57□□□□□ -0.88
SMAD4-211ENST00000590499 LNX2Q8N448 690 aa9.57□□□□□ -0.88
SMAD4-211ENST00000590499 PAPD5Q8NDF8 572 aaKnown RBP9.57□□□□□ -0.88
SMAD4-211ENST00000590499 OR10G2Q8NGC3 310 aa9.57□□□□□ -0.88
SMAD4-211ENST00000590499 OR52L1Q8NGH7 329 aa9.57□□□□□ -0.88
SMAD4-211ENST00000590499 OR52E2Q8NGJ4 325 aa9.57□□□□□ -0.88
SMAD4-211ENST00000590499 OR1J1Q8NGS3 322 aa9.57□□□□□ -0.88
SMAD4-211ENST00000590499 OR4Q3Q8NH05 313 aa9.57□□□□□ -0.88
SMAD4-211ENST00000590499 C4orf45Q96LM5 186 aa9.57□□□□□ -0.88
SMAD4-211ENST00000590499 FANCD2OSQ96PS1 177 aa9.57□□□□□ -0.88
SMAD4-211ENST00000590499 PIMREGQ9BSJ6 248 aa9.57□□□□□ -0.88
SMAD4-211ENST00000590499 FN3KQ9H479 309 aa9.57□□□□□ -0.88
SMAD4-211ENST00000590499 RERGLQ9H628 205 aa9.57□□□□□ -0.88
SMAD4-211ENST00000590499 RPRD1BQ9NQG5 326 aaKnown RBP9.57□□□□□ -0.88
SMAD4-211ENST00000590499 ATPIF1Q9UII2 106 aa9.57□□□□□ -0.88
SMAD4-211ENST00000590499 IGHV4-61A0A0C4DH41 118 aa9.56□□□□□ -0.88
SMAD4-211ENST00000590499 C17orf100A8MU93 164 aa9.56□□□□□ -0.88
SMAD4-211ENST00000590499 INAFM1C9JVW0 142 aa9.56□□□□□ -0.88
SMAD4-211ENST00000590499 H3BSA7 217 aa9.56□□□□□ -0.88
SMAD4-211ENST00000590499 RER1O15258 196 aa9.56□□□□□ -0.88
SMAD4-211ENST00000590499 NCR1O76036 304 aa9.56□□□□□ -0.88
SMAD4-211ENST00000590499 CST1P01037 141 aa9.56□□□□□ -0.88
SMAD4-211ENST00000590499 HPXP02790 462 aa9.56□□□□□ -0.88
SMAD4-211ENST00000590499 NAT2P11245 290 aa9.56□□□□□ -0.88
SMAD4-211ENST00000590499 GSTM3P21266 225 aa9.56□□□□□ -0.88
SMAD4-211ENST00000590499 MPV17P39210 176 aa9.56□□□□□ -0.88
SMAD4-211ENST00000590499 PPP1CBP62140 327 aa9.56□□□□□ -0.88
SMAD4-211ENST00000590499 ID3Q02535 119 aa9.56□□□□□ -0.88
SMAD4-211ENST00000590499 GLO1Q04760 184 aa9.56□□□□□ -0.88
SMAD4-211ENST00000590499 COX10Q12887 443 aa9.56□□□□□ -0.88
SMAD4-211ENST00000590499 MEP1BQ16820 701 aa9.56□□□□□ -0.88
SMAD4-211ENST00000590499 KRTAP21-3Q3LHN1 58 aa9.56□□□□□ -0.88
SMAD4-211ENST00000590499 SPATA46Q5T0L3 261 aa9.56□□□□□ -0.88
SMAD4-211ENST00000590499 SLC35F1Q5T1Q4 408 aa9.56□□□□□ -0.88
SMAD4-211ENST00000590499 MBNL2Q5VZF2 373 aaKnown RBP9.56□□□□□ -0.88
SMAD4-211ENST00000590499 UNQ6126/PRO20091Q6UXV3 157 aa9.56□□□□□ -0.88
SMAD4-211ENST00000590499 C1orf174Q8IYL3 243 aa9.56□□□□□ -0.88
SMAD4-211ENST00000590499 OR1F12Q8NHA8 337 aa9.56□□□□□ -0.88
SMAD4-211ENST00000590499 ABHD4Q8TB40 342 aa9.56□□□□□ -0.88
SMAD4-211ENST00000590499 SLC25A40Q8TBP6 338 aa9.56□□□□□ -0.88
SMAD4-211ENST00000590499 KLF14Q8TD94 323 aaPredicted RBP9.56□□□□□ -0.88
SMAD4-211ENST00000590499 IPCEF1Q8WWN9 437 aaPredicted RBP9.56□□□□□ -0.88
SMAD4-211ENST00000590499 SLC7A6Q92536 515 aa9.56□□□□□ -0.88
SMAD4-211ENST00000590499 GTF3AQ92664 365 aaKnown RBP9.56□□□□□ -0.88
SMAD4-211ENST00000590499 SLCO4A1Q96BD0 722 aa9.56□□□□□ -0.88
SMAD4-211ENST00000590499 FEVQ99581 238 aa9.56□□□□□ -0.88
SMAD4-211ENST00000590499 NIPSNAP1Q9BPW8 284 aa9.56□□□□□ -0.88
SMAD4-211ENST00000590499 RBM4Q9BWF3 364 aaKnown RBP9.56□□□□□ -0.88
SMAD4-211ENST00000590499 OR2J1Q9GZK6 312 aa9.56□□□□□ -0.88
SMAD4-211ENST00000590499 BPESC1Q9GZL8 116 aa9.56□□□□□ -0.88
SMAD4-211ENST00000590499 HINT3Q9NQE9 182 aaKnown RBP9.56□□□□□ -0.88
SMAD4-211ENST00000590499 TBCCD1Q9NVR7 557 aa9.56□□□□□ -0.88
SMAD4-211ENST00000590499 MRPL22Q9NWU5 206 aaKnown RBP9.56□□□□□ -0.88
SMAD4-211ENST00000590499 SLCO1C1Q9NYB5 712 aa9.56□□□□□ -0.88
SMAD4-211ENST00000590499 PLEK2Q9NYT0 353 aa9.56□□□□□ -0.88
SMAD4-211ENST00000590499 TAAR3PQ9P1P4 343 aa9.56□□□□□ -0.88
SMAD4-211ENST00000590499 EIF3KQ9UBQ5 218 aaKnown RBP9.56□□□□□ -0.88
SMAD4-211ENST00000590499 TANC2Q9HCD6 1990 aa9.55□□□□□ -0.88
SMAD4-211ENST00000590499 LYNX1G3V0Z9 82 aa9.55□□□□□ -0.88
SMAD4-211ENST00000590499 TLX2O43763 284 aaPredicted RBP9.55□□□□□ -0.88
SMAD4-211ENST00000590499 FKBP6O75344 327 aa9.55□□□□□ -0.88
SMAD4-211ENST00000590499 SOX14O95416 240 aa9.55□□□□□ -0.88
SMAD4-211ENST00000590499 ABHD16AO95870 558 aa9.55□□□□□ -0.88
SMAD4-211ENST00000590499 TACSTD2P09758 323 aa9.55□□□□□ -0.88
SMAD4-211ENST00000590499 LYNX1P0DP58 116 aa9.55□□□□□ -0.88
SMAD4-211ENST00000590499 GGT2P36268 569 aa9.55□□□□□ -0.88
SMAD4-211ENST00000590499 MMP15P51511 669 aa9.55□□□□□ -0.88
SMAD4-211ENST00000590499 SELENOVP59797 346 aa9.55□□□□□ -0.88
SMAD4-211ENST00000590499 MRPS11P82912 194 aaKnown RBP9.55□□□□□ -0.88
SMAD4-211ENST00000590499 TEKQ02763 1124 aa9.55□□□□□ -0.88
SMAD4-211ENST00000590499 CARTPTQ16568 116 aa9.55□□□□□ -0.88
SMAD4-211ENST00000590499 NKPD1Q17RQ9 610 aa9.55□□□□□ -0.88
SMAD4-211ENST00000590499 ALKBH6Q3KRA9 238 aa9.55□□□□□ -0.88
SMAD4-211ENST00000590499 KRTAP27-1Q3LI81 207 aa9.55□□□□□ -0.88
SMAD4-211ENST00000590499 ZNF718Q3SXZ3 478 aa9.55□□□□□ -0.88
SMAD4-211ENST00000590499 SLC18B1Q6NT16 456 aa9.55□□□□□ -0.88
SMAD4-211ENST00000590499 SPATA24Q86W54 205 aa9.55□□□□□ -0.88
SMAD4-211ENST00000590499 CYB561A3Q8NBI2 242 aa9.55□□□□□ -0.88
SMAD4-211ENST00000590499 SLC37A3Q8NCC5 494 aa9.55□□□□□ -0.88
SMAD4-211ENST00000590499 ICA1LQ8NDH6 482 aa9.55□□□□□ -0.88
SMAD4-211ENST00000590499 ZNF540Q8NDQ6 660 aa9.55□□□□□ -0.88
SMAD4-211ENST00000590499 GIPC3Q8TF64 312 aa9.55□□□□□ -0.88
SMAD4-211ENST00000590499 ZNRF4Q8WWF5 429 aa9.55□□□□□ -0.88
SMAD4-211ENST00000590499 TSSK6Q9BXA6 273 aa9.55□□□□□ -0.88
SMAD4-211ENST00000590499 NMNAT2Q9BZQ4 307 aa9.55□□□□□ -0.88
SMAD4-211ENST00000590499 POFUT1Q9H488 388 aa9.55□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 47.2 ms