RNA–Protein interactions for RNA: ENST00000589838.5

PRKCSH-209, Transcript of protein kinase C substrate 80K-H, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PRKCSH, Length 1,898 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCSH-209ENST00000589838 TTRP02766 147 aa17.04■□□□□ 0.32
PRKCSH-209ENST00000589838 OPN1LWP04000 364 aa17.04■□□□□ 0.32
PRKCSH-209ENST00000589838 COX6A1P12074 109 aa17.04■□□□□ 0.32
PRKCSH-209ENST00000589838 SFTPDP35247 375 aa17.04■□□□□ 0.32
PRKCSH-209ENST00000589838 HTR2BP41595 481 aa17.04■□□□□ 0.32
PRKCSH-209ENST00000589838 EIF1AXP47813 144 aaKnown RBP17.04■□□□□ 0.32
PRKCSH-209ENST00000589838 SSR4P51571 173 aa17.04■□□□□ 0.32
PRKCSH-209ENST00000589838 TAS2R19P59542 299 aa17.04■□□□□ 0.32
PRKCSH-209ENST00000589838 GALK2Q01415 458 aa17.04■□□□□ 0.32
PRKCSH-209ENST00000589838 PRAMEF20Q5VT98 475 aa17.04■□□□□ 0.32
PRKCSH-209ENST00000589838 RAB12Q6IQ22 244 aa17.04■□□□□ 0.32
PRKCSH-209ENST00000589838 TMPPEQ6ZT21 453 aa17.04■□□□□ 0.32
PRKCSH-209ENST00000589838 ZNF627Q7L945 461 aa17.04■□□□□ 0.32
PRKCSH-209ENST00000589838 BIVMQ86UB2 503 aa17.04■□□□□ 0.32
PRKCSH-209ENST00000589838 OR51A2Q8NGJ7 313 aa17.04■□□□□ 0.32
PRKCSH-209ENST00000589838 OR6N1Q8NGY5 312 aa17.04■□□□□ 0.32
PRKCSH-209ENST00000589838 FGGYQ96C11 551 aa17.04■□□□□ 0.32
PRKCSH-209ENST00000589838 SEC22CQ9BRL7 303 aa17.04■□□□□ 0.32
PRKCSH-209ENST00000589838 GINS4Q9BRT9 223 aa17.04■□□□□ 0.32
PRKCSH-209ENST00000589838 ANGPTL4Q9BY76 406 aa17.04■□□□□ 0.32
PRKCSH-209ENST00000589838 METTL17Q9H7H0 456 aaPredicted RBP17.04■□□□□ 0.32
PRKCSH-209ENST00000589838 MGAT4CQ9UBM8 478 aa17.04■□□□□ 0.32
PRKCSH-209ENST00000589838 RAB22AQ9UL26 194 aa17.04■□□□□ 0.32
PRKCSH-209ENST00000589838 PCDHGA5Q9Y5G8 931 aa17.04■□□□□ 0.32
PRKCSH-209ENST00000589838 IGHEP01854 428 aa17.03■□□□□ 0.32
PRKCSH-209ENST00000589838 TPOP07202 933 aa17.03■□□□□ 0.32
PRKCSH-209ENST00000589838 CD63P08962 238 aa17.03■□□□□ 0.32
PRKCSH-209ENST00000589838 C19orf57Q0VDD7 668 aa17.03■□□□□ 0.32
PRKCSH-209ENST00000589838 CDH26Q8IXH8 852 aa17.03■□□□□ 0.32
PRKCSH-209ENST00000589838 FAM109AQ8N4B1 249 aa17.03■□□□□ 0.32
PRKCSH-209ENST00000589838 TMEM229BQ8NBD8 167 aa17.03■□□□□ 0.32
PRKCSH-209ENST00000589838 OR11H4Q8NGC9 324 aa17.03■□□□□ 0.32
PRKCSH-209ENST00000589838 OR5D14Q8NGL3 314 aa17.03■□□□□ 0.32
PRKCSH-209ENST00000589838 OR2Y1Q8NGV0 311 aa17.03■□□□□ 0.32
PRKCSH-209ENST00000589838 OR2T35Q8NGX2 323 aa17.03■□□□□ 0.32
PRKCSH-209ENST00000589838 GUCD1Q96NT3 240 aa17.03■□□□□ 0.32
PRKCSH-209ENST00000589838 KCNK15Q9H427 330 aa17.03■□□□□ 0.32
PRKCSH-209ENST00000589838 TMEM138Q9NPI0 162 aa17.03■□□□□ 0.32
PRKCSH-209ENST00000589838 UPB1Q9UBR1 384 aa17.03■□□□□ 0.32
PRKCSH-209ENST00000589838 DOK2O60496 412 aa17.03■□□□□ 0.32
PRKCSH-209ENST00000589838 TSC22D2O75157 780 aa17.03■□□□□ 0.32
PRKCSH-209ENST00000589838 ERCC1P07992 297 aaPredicted RBP17.03■□□□□ 0.32
PRKCSH-209ENST00000589838 GIPP09681 153 aaPredicted RBP17.03■□□□□ 0.32
PRKCSH-209ENST00000589838 ANXA7P20073 488 aaKnown RBP17.03■□□□□ 0.32
PRKCSH-209ENST00000589838 C4BPBP20851 252 aa17.03■□□□□ 0.32
PRKCSH-209ENST00000589838 GNALP38405 381 aa17.03■□□□□ 0.32
PRKCSH-209ENST00000589838 PSMA6P60900 246 aaKnown RBP17.03■□□□□ 0.32
PRKCSH-209ENST00000589838 GABREP78334 506 aa17.03■□□□□ 0.32
PRKCSH-209ENST00000589838 GUCA2AQ02747 115 aa17.03■□□□□ 0.32
PRKCSH-209ENST00000589838 HIST3H3Q16695 136 aa17.03■□□□□ 0.32
PRKCSH-209ENST00000589838 C6orf183Q5T699 404 aa17.03■□□□□ 0.32
PRKCSH-209ENST00000589838 STEAP1BQ6NZ63 245 aa17.03■□□□□ 0.32
PRKCSH-209ENST00000589838 CLEC1AQ8NC01 280 aa17.03■□□□□ 0.32
PRKCSH-209ENST00000589838 OR1M1Q8NGA1 313 aa17.03■□□□□ 0.32
PRKCSH-209ENST00000589838 OR8H1Q8NGG4 311 aa17.03■□□□□ 0.32
PRKCSH-209ENST00000589838 UQCC2Q9BRT2 126 aa17.03■□□□□ 0.32
PRKCSH-209ENST00000589838 LHFPL6Q9Y693 200 aa17.03■□□□□ 0.32
PRKCSH-209ENST00000589838 PYCARD-AS1I3L0S3 204 aa17.02■□□□□ 0.32
PRKCSH-209ENST00000589838 EIF1BO60739 113 aaKnown RBP17.02■□□□□ 0.32
PRKCSH-209ENST00000589838 KLF7O75840 302 aaPredicted RBP17.02■□□□□ 0.32
PRKCSH-209ENST00000589838 SCGNO76038 276 aa17.02■□□□□ 0.32
PRKCSH-209ENST00000589838 PDGFBP01127 241 aaPredicted RBP17.02■□□□□ 0.32
PRKCSH-209ENST00000589838 CCL4P13236 92 aa17.02■□□□□ 0.32
PRKCSH-209ENST00000589838 SELENOPP49908 381 aa17.02■□□□□ 0.32
PRKCSH-209ENST00000589838 DSCR4P56555 118 aaPredicted RBP17.02■□□□□ 0.32
PRKCSH-209ENST00000589838 GNG2P59768 71 aa17.02■□□□□ 0.32
PRKCSH-209ENST00000589838 ZXDAP98168 799 aa17.02■□□□□ 0.32
PRKCSH-209ENST00000589838 TRIM61Q5EBN2 209 aa17.02■□□□□ 0.32
PRKCSH-209ENST00000589838 CARD17Q5XLA6 110 aa17.02■□□□□ 0.32
PRKCSH-209ENST00000589838 ZNF813Q6ZN06 617 aa17.02■□□□□ 0.32
PRKCSH-209ENST00000589838 LYPD6Q86Y78 171 aa17.02■□□□□ 0.32
PRKCSH-209ENST00000589838 SLC22A24Q8N4F4 322 aa17.02■□□□□ 0.32
PRKCSH-209ENST00000589838 OR10S1Q8NGN2 331 aa17.02■□□□□ 0.32
PRKCSH-209ENST00000589838 SEH1LQ96EE3 360 aa17.02■□□□□ 0.32
PRKCSH-209ENST00000589838 NAA11Q9BSU3 229 aaPredicted RBP17.02■□□□□ 0.32
PRKCSH-209ENST00000589838 PRDM6Q9NQX0 595 aa17.02■□□□□ 0.32
PRKCSH-209ENST00000589838 SLC39A1Q9NY26 324 aa17.02■□□□□ 0.32
PRKCSH-209ENST00000589838 SLC23A1Q9UHI7 598 aa17.02■□□□□ 0.32
PRKCSH-209ENST00000589838 HS3ST3B1Q9Y662 390 aa17.02■□□□□ 0.32
PRKCSH-209ENST00000589838 NSG1A0A0A6YYJ2 146 aa17.01■□□□□ 0.31
PRKCSH-209ENST00000589838 PATE3B3GLJ2 98 aa17.01■□□□□ 0.31
PRKCSH-209ENST00000589838 QDPRP09417 244 aa17.01■□□□□ 0.31
PRKCSH-209ENST00000589838 RAB3AP20336 220 aa17.01■□□□□ 0.31
PRKCSH-209ENST00000589838 FOLR3P41439 243 aa17.01■□□□□ 0.31
PRKCSH-209ENST00000589838 GUCA1AP43080 201 aaPredicted RBP17.01■□□□□ 0.31
PRKCSH-209ENST00000589838 PER3P56645 1201 aa17.01■□□□□ 0.31
PRKCSH-209ENST00000589838 RAP2BP61225 183 aa17.01■□□□□ 0.31
PRKCSH-209ENST00000589838 FOXK1P85037 733 aa17.01■□□□□ 0.31
PRKCSH-209ENST00000589838 PMPCAQ10713 525 aa17.01■□□□□ 0.31
PRKCSH-209ENST00000589838 SLC23A3Q6PIS1 610 aa17.01■□□□□ 0.31
PRKCSH-209ENST00000589838 SLC36A1Q7Z2H8 476 aa17.01■□□□□ 0.31
PRKCSH-209ENST00000589838 GABRG1Q8N1C3 465 aa17.01■□□□□ 0.31
PRKCSH-209ENST00000589838 CDCP1Q9H5V8 836 aa17.01■□□□□ 0.31
PRKCSH-209ENST00000589838 EIF3KQ9UBQ5 218 aaKnown RBP17.01■□□□□ 0.31
PRKCSH-209ENST00000589838 TNFRSF10AO00220 468 aa17.01■□□□□ 0.31
PRKCSH-209ENST00000589838 GDF9O60383 454 aa17.01■□□□□ 0.31
PRKCSH-209ENST00000589838 LMX1BO60663 402 aa17.01■□□□□ 0.31
PRKCSH-209ENST00000589838 VAMP5O95183 116 aa17.01■□□□□ 0.31
PRKCSH-209ENST00000589838 BPNT1O95861 308 aa17.01■□□□□ 0.31
PRKCSH-209ENST00000589838 RLN1P04808 185 aa17.01■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms