RNA–Protein interactions for RNA: ENST00000589753.1

ATG4D-211, Transcript of autophagy related 4D cysteine peptidase, humanhuman

TSL 1 (best)

Gene ATG4D, Length 931 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4D-211ENST00000589753 GRB2P62993 217 aaKnown RBP13.17□□□□□ -0.3
ATG4D-211ENST00000589753 GALK2Q01415 458 aa13.17□□□□□ -0.3
ATG4D-211ENST00000589753 ROM1Q03395 351 aa13.17□□□□□ -0.3
ATG4D-211ENST00000589753 MVKQ03426 396 aa13.17□□□□□ -0.3
ATG4D-211ENST00000589753 GALEQ14376 348 aa13.17□□□□□ -0.3
ATG4D-211ENST00000589753 DEGS2Q6QHC5 323 aa13.17□□□□□ -0.3
ATG4D-211ENST00000589753 PLEKHG7Q6ZR37 379 aa13.17□□□□□ -0.3
ATG4D-211ENST00000589753 ZNF679Q8IYX0 411 aa13.17□□□□□ -0.3
ATG4D-211ENST00000589753 IL17RDQ8NFM7 739 aa13.17□□□□□ -0.3
ATG4D-211ENST00000589753 SLC7A6Q92536 515 aa13.17□□□□□ -0.3
ATG4D-211ENST00000589753 SGCDQ92629 289 aa13.17□□□□□ -0.3
ATG4D-211ENST00000589753 SPTSSAQ969W0 71 aa13.17□□□□□ -0.3
ATG4D-211ENST00000589753 POM121L2Q96KW2 1035 aa13.17□□□□□ -0.3
ATG4D-211ENST00000589753 KCNJ15Q99712 375 aa13.17□□□□□ -0.3
ATG4D-211ENST00000589753 ALG8Q9BVK2 526 aa13.17□□□□□ -0.3
ATG4D-211ENST00000589753 ESRP2Q9H6T0 727 aaKnown RBP13.17□□□□□ -0.3
ATG4D-211ENST00000589753 CDH20Q9HBT6 801 aa13.17□□□□□ -0.3
ATG4D-211ENST00000589753 ERVK-18Q9QC07 812 aa13.17□□□□□ -0.3
ATG4D-211ENST00000589753 FASNP49327 2511 aaKnown RBP13.17□□□□□ -0.3
ATG4D-211ENST00000589753 MYO18BQ8IUG5 2567 aa13.17□□□□□ -0.3
ATG4D-211ENST00000589753 C5orf49A4QMS7 147 aa13.16□□□□□ -0.3
ATG4D-211ENST00000589753 DPRXA6NFQ7 191 aa13.16□□□□□ -0.3
ATG4D-211ENST00000589753 F5H5K5 113 aa13.16□□□□□ -0.3
ATG4D-211ENST00000589753 MAGEB4O15481 346 aaPredicted RBP13.16□□□□□ -0.3
ATG4D-211ENST00000589753 RGS10O43665 173 aa13.16□□□□□ -0.3
ATG4D-211ENST00000589753 ZNF254O75437 659 aa13.16□□□□□ -0.3
ATG4D-211ENST00000589753 CRYAAP02489 173 aa13.16□□□□□ -0.3
ATG4D-211ENST00000589753 KRT8P05787 483 aa13.16□□□□□ -0.3
ATG4D-211ENST00000589753 DBHP09172 617 aa13.16□□□□□ -0.3
ATG4D-211ENST00000589753 LIMS3P0CW19 117 aa13.16□□□□□ -0.3
ATG4D-211ENST00000589753 LIMS4P0CW20 117 aa13.16□□□□□ -0.3
ATG4D-211ENST00000589753 CCNOP22674 350 aa13.16□□□□□ -0.3
ATG4D-211ENST00000589753 ETV1P50549 477 aa13.16□□□□□ -0.3
ATG4D-211ENST00000589753 ACTA2P62736 377 aa13.16□□□□□ -0.3
ATG4D-211ENST00000589753 ACTG2P63267 376 aa13.16□□□□□ -0.3
ATG4D-211ENST00000589753 NAAAQ02083 359 aa13.16□□□□□ -0.3
ATG4D-211ENST00000589753 BSPH1Q075Z2 132 aa13.16□□□□□ -0.3
ATG4D-211ENST00000589753 KRTAP27-1Q3LI81 207 aa13.16□□□□□ -0.3
ATG4D-211ENST00000589753 CDONQ4KMG0 1287 aa13.16□□□□□ -0.3
ATG4D-211ENST00000589753 BEX5Q5H9J7 111 aa13.16□□□□□ -0.3
ATG4D-211ENST00000589753 NCMAPQ5T1S8 102 aa13.16□□□□□ -0.3
ATG4D-211ENST00000589753 SP5Q6BEB4 398 aaPredicted RBP13.16□□□□□ -0.3
ATG4D-211ENST00000589753 FAM220AQ7Z4H9 259 aa13.16□□□□□ -0.3
ATG4D-211ENST00000589753 PLPPR2Q96GM1 343 aa13.16□□□□□ -0.3
ATG4D-211ENST00000589753 DCLRE1CQ96SD1 692 aaKnown RBP13.16□□□□□ -0.3
ATG4D-211ENST00000589753 KCNS3Q9BQ31 491 aa13.16□□□□□ -0.3
ATG4D-211ENST00000589753 ZNF649Q9BS31 505 aa13.16□□□□□ -0.3
ATG4D-211ENST00000589753 NIPAL2Q9H841 368 aa13.16□□□□□ -0.3
ATG4D-211ENST00000589753 ELOVL3Q9HB03 270 aa13.16□□□□□ -0.3
ATG4D-211ENST00000589753 MRM2Q9UI43 246 aaKnown RBP13.16□□□□□ -0.3
ATG4D-211ENST00000589753 LRP12Q9Y561 859 aa13.16□□□□□ -0.3
ATG4D-211ENST00000589753 IGHV2OR16-5A0A0B4J2B6 119 aa13.15□□□□□ -0.3
ATG4D-211ENST00000589753 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP13.15□□□□□ -0.3
ATG4D-211ENST00000589753 METTL15A6NJ78 407 aa13.15□□□□□ -0.3
ATG4D-211ENST00000589753 M0R135 149 aa13.15□□□□□ -0.3
ATG4D-211ENST00000589753 SULT1C4O75897 302 aa13.15□□□□□ -0.3
ATG4D-211ENST00000589753 TNFAIP8O95379 198 aa13.15□□□□□ -0.3
ATG4D-211ENST00000589753 ZNF35P13682 527 aa13.15□□□□□ -0.3
ATG4D-211ENST00000589753 PRKXP51817 358 aa13.15□□□□□ -0.3
ATG4D-211ENST00000589753 RIDAP52758 137 aaKnown RBP13.15□□□□□ -0.3
ATG4D-211ENST00000589753 NR1H2P55055 460 aa13.15□□□□□ -0.3
ATG4D-211ENST00000589753 TPTEP56180 551 aa13.15□□□□□ -0.3
ATG4D-211ENST00000589753 RSPO1Q2MKA7 263 aaPredicted RBP13.15□□□□□ -0.3
ATG4D-211ENST00000589753 KCTD21Q4G0X4 260 aa13.15□□□□□ -0.3
ATG4D-211ENST00000589753 TP53I3Q53FA7 332 aa13.15□□□□□ -0.3
ATG4D-211ENST00000589753 ZNF684Q5T5D7 378 aa13.15□□□□□ -0.3
ATG4D-211ENST00000589753 RNLSQ5VYX0 342 aa13.15□□□□□ -0.3
ATG4D-211ENST00000589753 PRSS48Q7RTY5 328 aa13.15□□□□□ -0.3
ATG4D-211ENST00000589753 KCTD20Q7Z5Y7 419 aa13.15□□□□□ -0.3
ATG4D-211ENST00000589753 PAQR4Q8N4S7 273 aaPredicted RBP13.15□□□□□ -0.3
ATG4D-211ENST00000589753 ZNF283Q8N7M2 679 aa13.15□□□□□ -0.3
ATG4D-211ENST00000589753 YIPF7Q8N8F6 280 aa13.15□□□□□ -0.3
ATG4D-211ENST00000589753 ZNF799Q96GE5 643 aa13.15□□□□□ -0.3
ATG4D-211ENST00000589753 PSMG3-AS1Q96PY0 264 aa13.15□□□□□ -0.3
ATG4D-211ENST00000589753 CDCA4Q9BXL8 241 aa13.15□□□□□ -0.3
ATG4D-211ENST00000589753 CCDC90BQ9GZT6 254 aa13.15□□□□□ -0.3
ATG4D-211ENST00000589753 KCNN3Q9UGI6 736 aa13.15□□□□□ -0.3
ATG4D-211ENST00000589753 CLEC2DQ9UHP7 191 aa13.15□□□□□ -0.3
ATG4D-211ENST00000589753 GNG8Q9UK08 70 aa13.15□□□□□ -0.3
ATG4D-211ENST00000589753 GRIP1Q9Y3R0 1128 aa13.15□□□□□ -0.3
ATG4D-211ENST00000589753 DOPEY1Q5JWR5 2465 aa13.15□□□□□ -0.3
ATG4D-211ENST00000589753 FLNCQ14315 2725 aa13.14□□□□□ -0.31
ATG4D-211ENST00000589753 DEFB108AA8MXU0 73 aa13.14□□□□□ -0.31
ATG4D-211ENST00000589753 J3QLW9 94 aa13.14□□□□□ -0.31
ATG4D-211ENST00000589753 ABCD4O14678 606 aa13.14□□□□□ -0.31
ATG4D-211ENST00000589753 SIAH2O43255 324 aa13.14□□□□□ -0.31
ATG4D-211ENST00000589753 MRPS14O60783 128 aaKnown RBP13.14□□□□□ -0.31
ATG4D-211ENST00000589753 APOC1P02654 83 aa13.14□□□□□ -0.31
ATG4D-211ENST00000589753 MT-ND2P03891 347 aa13.14□□□□□ -0.31
ATG4D-211ENST00000589753 TACSTD2P09758 323 aa13.14□□□□□ -0.31
ATG4D-211ENST00000589753 ACSM4P0C7M7 580 aa13.14□□□□□ -0.31
ATG4D-211ENST00000589753 COX6B1P14854 86 aa13.14□□□□□ -0.31
ATG4D-211ENST00000589753 ZNF19P17023 458 aa13.14□□□□□ -0.31
ATG4D-211ENST00000589753 CALCRP30988 508 aa13.14□□□□□ -0.31
ATG4D-211ENST00000589753 OTX1P32242 354 aaPredicted RBP13.14□□□□□ -0.31
ATG4D-211ENST00000589753 DCTDP32321 178 aa13.14□□□□□ -0.31
ATG4D-211ENST00000589753 SLC6A9P48067 706 aa13.14□□□□□ -0.31
ATG4D-211ENST00000589753 CX3CR1P49238 355 aa13.14□□□□□ -0.31
ATG4D-211ENST00000589753 OR12D2P58182 307 aa13.14□□□□□ -0.31
ATG4D-211ENST00000589753 SPOCK1Q08629 439 aa13.14□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms