RNA–Protein interactions for RNA: ENST00000589294.1

DNMT1-218, Transcript of DNA methyltransferase 1, humanhuman

TSL 2

Gene DNMT1, Length 575 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT1-218ENST00000589294 ZNF540Q8NDQ6 660 aa10.55□□□□□ -0.72
DNMT1-218ENST00000589294 OR52I1Q8NGK6 324 aa10.55□□□□□ -0.72
DNMT1-218ENST00000589294 OR10S1Q8NGN2 331 aa10.55□□□□□ -0.72
DNMT1-218ENST00000589294 MYDGFQ969H8 173 aa10.55□□□□□ -0.72
DNMT1-218ENST00000589294 MRPL48Q96GC5 212 aaKnown RBP10.55□□□□□ -0.72
DNMT1-218ENST00000589294 PLPPR2Q96GM1 343 aa10.55□□□□□ -0.72
DNMT1-218ENST00000589294 TMEM80Q96HE8 168 aa10.55□□□□□ -0.72
DNMT1-218ENST00000589294 MS4A3Q96HJ5 214 aa10.55□□□□□ -0.72
DNMT1-218ENST00000589294 KCNS3Q9BQ31 491 aa10.55□□□□□ -0.72
DNMT1-218ENST00000589294 MROQ9BYG7 248 aa10.55□□□□□ -0.72
DNMT1-218ENST00000589294 DUSP21Q9H596 190 aa10.55□□□□□ -0.72
DNMT1-218ENST00000589294 NIPAL2Q9H841 368 aa10.55□□□□□ -0.72
DNMT1-218ENST00000589294 FKBP14Q9NWM8 211 aa10.55□□□□□ -0.72
DNMT1-218ENST00000589294 EIF3KQ9UBQ5 218 aaKnown RBP10.55□□□□□ -0.72
DNMT1-218ENST00000589294 DIMT1Q9UNQ2 313 aaKnown RBP10.55□□□□□ -0.72
DNMT1-218ENST00000589294 COPS3Q9UNS2 423 aa10.55□□□□□ -0.72
DNMT1-218ENST00000589294 SPEF1Q9Y4P9 236 aa10.55□□□□□ -0.72
DNMT1-218ENST00000589294 DOPEY2Q9Y3R5 2298 aa10.54□□□□□ -0.72
DNMT1-218ENST00000589294 IGHV2OR16-5A0A0B4J2B6 119 aa10.54□□□□□ -0.72
DNMT1-218ENST00000589294 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP10.54□□□□□ -0.72
DNMT1-218ENST00000589294 FAM221AA4D161 298 aa10.54□□□□□ -0.72
DNMT1-218ENST00000589294 C5orf49A4QMS7 147 aa10.54□□□□□ -0.72
DNMT1-218ENST00000589294 PTGES3LE9PB15 166 aa10.54□□□□□ -0.72
DNMT1-218ENST00000589294 SLC1A7O00341 560 aa10.54□□□□□ -0.72
DNMT1-218ENST00000589294 APOL3O95236 402 aa10.54□□□□□ -0.72
DNMT1-218ENST00000589294 TACSTD2P09758 323 aa10.54□□□□□ -0.72
DNMT1-218ENST00000589294 H2BFMP0C1H6 154 aa10.54□□□□□ -0.72
DNMT1-218ENST00000589294 TUBG1P23258 451 aa10.54□□□□□ -0.72
DNMT1-218ENST00000589294 CRHBPP24387 322 aa10.54□□□□□ -0.72
DNMT1-218ENST00000589294 OTX1P32242 354 aaPredicted RBP10.54□□□□□ -0.72
DNMT1-218ENST00000589294 RGS6P49758 472 aa10.54□□□□□ -0.72
DNMT1-218ENST00000589294 TPTEP56180 551 aa10.54□□□□□ -0.72
DNMT1-218ENST00000589294 GALEQ14376 348 aa10.54□□□□□ -0.72
DNMT1-218ENST00000589294 ZNF684Q5T5D7 378 aa10.54□□□□□ -0.72
DNMT1-218ENST00000589294 RNLSQ5VYX0 342 aa10.54□□□□□ -0.72
DNMT1-218ENST00000589294 PLEKHG7Q6ZR37 379 aa10.54□□□□□ -0.72
DNMT1-218ENST00000589294 KRT77Q7Z794 578 aa10.54□□□□□ -0.72
DNMT1-218ENST00000589294 ZNF786Q8N393 782 aa10.54□□□□□ -0.72
DNMT1-218ENST00000589294 SNX33Q8WV41 574 aa10.54□□□□□ -0.72
DNMT1-218ENST00000589294 OR8B4Q96RC9 309 aa10.54□□□□□ -0.72
DNMT1-218ENST00000589294 AMELYQ99218 206 aa10.54□□□□□ -0.72
DNMT1-218ENST00000589294 KCNJ15Q99712 375 aa10.54□□□□□ -0.72
DNMT1-218ENST00000589294 TMEM204Q9BSN7 226 aa10.54□□□□□ -0.72
DNMT1-218ENST00000589294 COPS4Q9BT78 406 aa10.54□□□□□ -0.72
DNMT1-218ENST00000589294 SP140LQ9H930 580 aa10.54□□□□□ -0.72
DNMT1-218ENST00000589294 CDH20Q9HBT6 801 aa10.54□□□□□ -0.72
DNMT1-218ENST00000589294 TUBG2Q9NRH3 451 aa10.54□□□□□ -0.72
DNMT1-218ENST00000589294 TBCCD1Q9NVR7 557 aa10.54□□□□□ -0.72
DNMT1-218ENST00000589294 CHCHD3Q9NX63 227 aaKnown RBP10.54□□□□□ -0.72
DNMT1-218ENST00000589294 BLOC1S6Q9UL45 172 aa10.54□□□□□ -0.72
DNMT1-218ENST00000589294 MYRFQ9Y2G1 1151 aa10.54□□□□□ -0.72
DNMT1-218ENST00000589294 KLHDC2Q9Y2U9 406 aa10.54□□□□□ -0.72
DNMT1-218ENST00000589294 PCDHGB5Q9Y5G0 923 aa10.54□□□□□ -0.72
DNMT1-218ENST00000589294 RTTNQ86VV8 2226 aa10.53□□□□□ -0.72
DNMT1-218ENST00000589294 PKDREJQ9NTG1 2253 aa10.53□□□□□ -0.72
DNMT1-218ENST00000589294 METTL15A6NJ78 407 aa10.53□□□□□ -0.72
DNMT1-218ENST00000589294 ACOD1A6NK06 481 aa10.53□□□□□ -0.72
DNMT1-218ENST00000589294 F5H5K5 113 aa10.53□□□□□ -0.72
DNMT1-218ENST00000589294 J3QW42 95 aa10.53□□□□□ -0.72
DNMT1-218ENST00000589294 ABCD4O14678 606 aa10.53□□□□□ -0.72
DNMT1-218ENST00000589294 SIAH2O43255 324 aa10.53□□□□□ -0.72
DNMT1-218ENST00000589294 KRT8P05787 483 aa10.53□□□□□ -0.72
DNMT1-218ENST00000589294 CCNOP22674 350 aa10.53□□□□□ -0.72
DNMT1-218ENST00000589294 NR4A1P22736 598 aa10.53□□□□□ -0.72
DNMT1-218ENST00000589294 LOXP28300 417 aaPredicted RBP10.53□□□□□ -0.72
DNMT1-218ENST00000589294 RAD52P43351 418 aa10.53□□□□□ -0.72
DNMT1-218ENST00000589294 UCP2P55851 309 aa10.53□□□□□ -0.72
DNMT1-218ENST00000589294 ACTA2P62736 377 aa10.53□□□□□ -0.72
DNMT1-218ENST00000589294 ACTG2P63267 376 aa10.53□□□□□ -0.72
DNMT1-218ENST00000589294 SLC35A2P78381 396 aa10.53□□□□□ -0.72
DNMT1-218ENST00000589294 GALK2Q01415 458 aa10.53□□□□□ -0.72
DNMT1-218ENST00000589294 ZNF85Q03923 595 aa10.53□□□□□ -0.72
DNMT1-218ENST00000589294 DRAM2Q6UX65 266 aa10.53□□□□□ -0.72
DNMT1-218ENST00000589294 LHFPL3Q86UP9 236 aa10.53□□□□□ -0.72
DNMT1-218ENST00000589294 MYPOPQ86VE0 399 aaPredicted RBP10.53□□□□□ -0.72
DNMT1-218ENST00000589294 STX19Q8N4C7 294 aa10.53□□□□□ -0.72
DNMT1-218ENST00000589294 PIK3IP1Q96FE7 263 aa10.53□□□□□ -0.72
DNMT1-218ENST00000589294 C4orf45Q96LM5 186 aa10.53□□□□□ -0.72
DNMT1-218ENST00000589294 COG8Q96MW5 612 aa10.53□□□□□ -0.72
DNMT1-218ENST00000589294 TBX5Q99593 518 aa10.53□□□□□ -0.72
DNMT1-218ENST00000589294 ELOVL3Q9HB03 270 aa10.53□□□□□ -0.72
DNMT1-218ENST00000589294 ERVK13-1Q9NX77 482 aa10.53□□□□□ -0.72
DNMT1-218ENST00000589294 SLCO1C1Q9NYB5 712 aa10.53□□□□□ -0.72
DNMT1-218ENST00000589294 LRCH1Q9Y2L9 728 aa10.53□□□□□ -0.72
DNMT1-218ENST00000589294 EXOSC1Q9Y3B2 195 aaKnown RBP10.53□□□□□ -0.72
DNMT1-218ENST00000589294 RNF115Q9Y4L5 304 aa10.53□□□□□ -0.72
DNMT1-218ENST00000589294 PTPN13Q12923 2485 aa10.53□□□□□ -0.72
DNMT1-218ENST00000589294 VSTM5A8MXK1 200 aa10.52□□□□□ -0.73
DNMT1-218ENST00000589294 M0R135 149 aa10.52□□□□□ -0.73
DNMT1-218ENST00000589294 MRPS14O60783 128 aaKnown RBP10.52□□□□□ -0.73
DNMT1-218ENST00000589294 CTAG2O75638 210 aa10.52□□□□□ -0.73
DNMT1-218ENST00000589294 CDK1P06493 297 aa10.52□□□□□ -0.73
DNMT1-218ENST00000589294 DBHP09172 617 aa10.52□□□□□ -0.73
DNMT1-218ENST00000589294 ACSM4P0C7M7 580 aa10.52□□□□□ -0.73
DNMT1-218ENST00000589294 LIMS3P0CW19 117 aa10.52□□□□□ -0.73
DNMT1-218ENST00000589294 LIMS4P0CW20 117 aa10.52□□□□□ -0.73
DNMT1-218ENST00000589294 CCL2P13500 99 aa10.52□□□□□ -0.73
DNMT1-218ENST00000589294 MYL12AP19105 171 aa10.52□□□□□ -0.73
DNMT1-218ENST00000589294 HSD11B1P28845 292 aa10.52□□□□□ -0.73
DNMT1-218ENST00000589294 CALCRP30988 508 aa10.52□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms