RNA–Protein interactions for RNA: ENST00000589219.1

VPS25-202, Transcript of vacuolar protein sorting 25 homolog, humanhuman

TSL 2

Gene VPS25, Length 914 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS25-202ENST00000589219 OR52A1Q9UKL2 312 aa8.86□□□□□ -0.99
VPS25-202ENST00000589219 MRPS7Q9Y2R9 242 aaKnown RBP8.86□□□□□ -0.99
VPS25-202ENST00000589219 N6AMT1Q9Y5N5 214 aa8.86□□□□□ -0.99
VPS25-202ENST00000589219 SDK2Q58EX2 2172 aa8.85□□□□□ -0.99
VPS25-202ENST00000589219 ZNF878C9JN71 531 aa8.85□□□□□ -0.99
VPS25-202ENST00000589219 XRCC3O43542 346 aa8.85□□□□□ -0.99
VPS25-202ENST00000589219 EIF1BO60739 113 aaKnown RBP8.85□□□□□ -0.99
VPS25-202ENST00000589219 PRAF2O60831 178 aa8.85□□□□□ -0.99
VPS25-202ENST00000589219 STK17BO94768 372 aa8.85□□□□□ -0.99
VPS25-202ENST00000589219 GLSO94925 669 aaPredicted RBP8.85□□□□□ -0.99
VPS25-202ENST00000589219 VAMP5O95183 116 aa8.85□□□□□ -0.99
VPS25-202ENST00000589219 WNT11O96014 354 aa8.85□□□□□ -0.99
VPS25-202ENST00000589219 PNPP00491 289 aa8.85□□□□□ -0.99
VPS25-202ENST00000589219 HPP00738 406 aa8.85□□□□□ -0.99
VPS25-202ENST00000589219 C1QBP02746 253 aa8.85□□□□□ -0.99
VPS25-202ENST00000589219 TCRBP04435 133 aa8.85□□□□□ -0.99
VPS25-202ENST00000589219 CELA2AP08217 269 aa8.85□□□□□ -0.99
VPS25-202ENST00000589219 CD37P11049 281 aa8.85□□□□□ -0.99
VPS25-202ENST00000589219 ZNF43P17038 809 aa8.85□□□□□ -0.99
VPS25-202ENST00000589219 CDK2P24941 298 aa8.85□□□□□ -0.99
VPS25-202ENST00000589219 STOMP27105 288 aa8.85□□□□□ -0.99
VPS25-202ENST00000589219 ERP29P30040 261 aaKnown RBP8.85□□□□□ -0.99
VPS25-202ENST00000589219 FAUP35544 74 aaKnown RBP8.85□□□□□ -0.99
VPS25-202ENST00000589219 DNASE1L1P49184 302 aa8.85□□□□□ -0.99
VPS25-202ENST00000589219 PTH2RP49190 550 aa8.85□□□□□ -0.99
VPS25-202ENST00000589219 SRP9P49458 86 aaKnown RBP8.85□□□□□ -0.99
VPS25-202ENST00000589219 CLDN12P56749 244 aa8.85□□□□□ -0.99
VPS25-202ENST00000589219 PSMA6P60900 246 aaKnown RBP8.85□□□□□ -0.99
VPS25-202ENST00000589219 CSNK2A1P68400 391 aaPredicted RBP8.85□□□□□ -0.99
VPS25-202ENST00000589219 SSBP1Q04837 148 aaKnown RBP8.85□□□□□ -0.99
VPS25-202ENST00000589219 MAB21L1Q13394 359 aa8.85□□□□□ -0.99
VPS25-202ENST00000589219 POU4F3Q15319 338 aa8.85□□□□□ -0.99
VPS25-202ENST00000589219 KCNMB1Q16558 191 aa8.85□□□□□ -0.99
VPS25-202ENST00000589219 NDUFA5Q16718 116 aa8.85□□□□□ -0.99
VPS25-202ENST00000589219 RNASE12Q5GAN4 147 aaKnown RBP8.85□□□□□ -0.99
VPS25-202ENST00000589219 ANKRD16Q6P6B7 361 aa8.85□□□□□ -0.99
VPS25-202ENST00000589219 SLC25A47Q6Q0C1 308 aa8.85□□□□□ -0.99
VPS25-202ENST00000589219 DNM1P46Q6ZS02 220 aa8.85□□□□□ -0.99
VPS25-202ENST00000589219 TMPPEQ6ZT21 453 aa8.85□□□□□ -0.99
VPS25-202ENST00000589219 RHOUQ7L0Q8 258 aa8.85□□□□□ -0.99
VPS25-202ENST00000589219 FGD2Q7Z6J4 655 aa8.85□□□□□ -0.99
VPS25-202ENST00000589219 NOXA1Q86UR1 476 aa8.85□□□□□ -0.99
VPS25-202ENST00000589219 RPS19BP1Q86WX3 136 aaKnown RBP8.85□□□□□ -0.99
VPS25-202ENST00000589219 DTX1Q86Y01 620 aa8.85□□□□□ -0.99
VPS25-202ENST00000589219 HIST2H2ABQ8IUE6 130 aaPredicted RBP8.85□□□□□ -0.99
VPS25-202ENST00000589219 IZUMO1Q8IYV9 350 aa8.85□□□□□ -0.99
VPS25-202ENST00000589219 TMEM156Q8N614 296 aa8.85□□□□□ -0.99
VPS25-202ENST00000589219 OR51A4Q8NGJ6 313 aa8.85□□□□□ -0.99
VPS25-202ENST00000589219 OR6M1Q8NGM8 313 aa8.85□□□□□ -0.99
VPS25-202ENST00000589219 OR13C3Q8NGS6 347 aa8.85□□□□□ -0.99
VPS25-202ENST00000589219 OR56B4Q8NH76 319 aa8.85□□□□□ -0.99
VPS25-202ENST00000589219 ASB5Q8WWX0 329 aa8.85□□□□□ -0.99
VPS25-202ENST00000589219 FOXRED1Q96CU9 486 aaPredicted RBP8.85□□□□□ -0.99
VPS25-202ENST00000589219 SLAMF6Q96DU3 332 aa8.85□□□□□ -0.99
VPS25-202ENST00000589219 SCMH1Q96GD3 660 aa8.85□□□□□ -0.99
VPS25-202ENST00000589219 SGCZQ96LD1 299 aa8.85□□□□□ -0.99
VPS25-202ENST00000589219 NAA11Q9BSU3 229 aaPredicted RBP8.85□□□□□ -0.99
VPS25-202ENST00000589219 CACNG6Q9BXT2 260 aa8.85□□□□□ -0.99
VPS25-202ENST00000589219 ZNF160Q9HCG1 818 aa8.85□□□□□ -0.99
VPS25-202ENST00000589219 RANGRFQ9HD47 186 aaPredicted RBP8.85□□□□□ -0.99
VPS25-202ENST00000589219 G6PC2Q9NQR9 355 aa8.85□□□□□ -0.99
VPS25-202ENST00000589219 NUDT15Q9NV35 164 aa8.85□□□□□ -0.99
VPS25-202ENST00000589219 TAS2R8Q9NYW2 309 aa8.85□□□□□ -0.99
VPS25-202ENST00000589219 FOXJ2Q9P0K8 574 aa8.85□□□□□ -0.99
VPS25-202ENST00000589219 CYB5R1Q9UHQ9 305 aa8.85□□□□□ -0.99
VPS25-202ENST00000589219 POU2F3Q9UKI9 436 aa8.85□□□□□ -0.99
VPS25-202ENST00000589219 SLC22A13Q9Y226 551 aa8.85□□□□□ -0.99
VPS25-202ENST00000589219 POLR1DQ9Y2S0 133 aa8.85□□□□□ -0.99
VPS25-202ENST00000589219 EMC9Q9Y3B6 208 aa8.85□□□□□ -0.99
VPS25-202ENST00000589219 MPDZO75970 2070 aa8.85□□□□□ -0.99
VPS25-202ENST00000589219 A0A0A6YYH2 397 aa8.84□□□□□ -0.99
VPS25-202ENST00000589219 IGKV1D-43A0A0B4J1Z2 117 aa8.84□□□□□ -0.99
VPS25-202ENST00000589219 TMEM269A0A1B0GVZ9 245 aa8.84□□□□□ -0.99
VPS25-202ENST00000589219 A0A1W2PNR3 127 aa8.84□□□□□ -0.99
VPS25-202ENST00000589219 A0A1W2PPL8 197 aa8.84□□□□□ -0.99
VPS25-202ENST00000589219 ANKRD20A5PA0PJZ0 165 aa8.84□□□□□ -0.99
VPS25-202ENST00000589219 A6NJ64 397 aa8.84□□□□□ -0.99
VPS25-202ENST00000589219 ZNF726A6NNF4 738 aa8.84□□□□□ -0.99
VPS25-202ENST00000589219 A8MV72 311 aaPredicted RBP8.84□□□□□ -0.99
VPS25-202ENST00000589219 SULT2B1O00204 365 aa8.84□□□□□ -0.99
VPS25-202ENST00000589219 MPZL1O95297 269 aa8.84□□□□□ -0.99
VPS25-202ENST00000589219 H2AFB2P0C5Z0 115 aa8.84□□□□□ -0.99
VPS25-202ENST00000589219 CCL3P10147 92 aa8.84□□□□□ -0.99
VPS25-202ENST00000589219 SFTPDP35247 375 aa8.84□□□□□ -0.99
VPS25-202ENST00000589219 POU3F4P49335 361 aa8.84□□□□□ -0.99
VPS25-202ENST00000589219 NKX2-5P52952 324 aaPredicted RBP8.84□□□□□ -0.99
VPS25-202ENST00000589219 CD83Q01151 205 aa8.84□□□□□ -0.99
VPS25-202ENST00000589219 SNTB2Q13425 540 aaKnown RBP8.84□□□□□ -0.99
VPS25-202ENST00000589219 ODF4Q2M2E3 257 aa8.84□□□□□ -0.99
VPS25-202ENST00000589219 TMEM176BQ3YBM2 270 aaPredicted RBP8.84□□□□□ -0.99
VPS25-202ENST00000589219 RAET1LQ5VY80 246 aa8.84□□□□□ -0.99
VPS25-202ENST00000589219 CD276Q5ZPR3 534 aa8.84□□□□□ -0.99
VPS25-202ENST00000589219 FAM166AQ6J272 317 aa8.84□□□□□ -0.99
VPS25-202ENST00000589219 C6orf15Q6UXA7 325 aaPredicted RBP8.84□□□□□ -0.99
VPS25-202ENST00000589219 PPP1R32Q7Z5V6 425 aa8.84□□□□□ -0.99
VPS25-202ENST00000589219 ADGRE4PQ86SQ3 457 aa8.84□□□□□ -0.99
VPS25-202ENST00000589219 VASH2Q86V25 355 aa8.84□□□□□ -0.99
VPS25-202ENST00000589219 LINC00346Q8IVM7 164 aa8.84□□□□□ -0.99
VPS25-202ENST00000589219 IL22RA1Q8N6P7 574 aa8.84□□□□□ -0.99
VPS25-202ENST00000589219 DNAAF1Q8NEP3 725 aa8.84□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 50.1 ms