RNA–Protein interactions for RNA: ENST00000589076.5

SMAD4-207, Transcript of SMAD family member 4, humanhuman

TSL 5

Gene SMAD4, Length 576 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-207ENST00000589076 PLET1Q6UQ28 207 aa2.09□□□□□ -2.07
SMAD4-207ENST00000589076 H1FOOQ8IZA3 346 aaPredicted RBP2.09□□□□□ -2.07
SMAD4-207ENST00000589076 JAGN1Q8N5M9 183 aa2.09□□□□□ -2.07
SMAD4-207ENST00000589076 COMMD1Q8N668 190 aa2.09□□□□□ -2.07
SMAD4-207ENST00000589076 METTL13Q8N6R0 699 aa2.09□□□□□ -2.07
SMAD4-207ENST00000589076 ZFP41Q8N8Y5 198 aa2.09□□□□□ -2.07
SMAD4-207ENST00000589076 CHST4Q8NCG5 386 aa2.09□□□□□ -2.07
SMAD4-207ENST00000589076 BBOF1Q8ND07 529 aa2.09□□□□□ -2.07
SMAD4-207ENST00000589076 OR2L8Q8NGY9 312 aa2.09□□□□□ -2.07
SMAD4-207ENST00000589076 PDXPQ96GD0 296 aa2.09□□□□□ -2.07
SMAD4-207ENST00000589076 ANP32EQ9BTT0 268 aa2.09□□□□□ -2.07
SMAD4-207ENST00000589076 ANKRD60Q9BZ19 345 aa2.09□□□□□ -2.07
SMAD4-207ENST00000589076 CLSTN2Q9H4D0 955 aa2.09□□□□□ -2.07
SMAD4-207ENST00000589076 ELOVL6Q9H5J4 265 aa2.09□□□□□ -2.07
SMAD4-207ENST00000589076 MRM3Q9HC36 420 aaKnown RBP2.09□□□□□ -2.07
SMAD4-207ENST00000589076 RETNQ9HD89 108 aa2.09□□□□□ -2.07
SMAD4-207ENST00000589076 MRPS30Q9NP92 439 aaKnown RBP2.09□□□□□ -2.07
SMAD4-207ENST00000589076 CCNB1IP1Q9NPC3 277 aa2.09□□□□□ -2.07
SMAD4-207ENST00000589076 DDX19AQ9NUU7 478 aaKnown RBP2.09□□□□□ -2.07
SMAD4-207ENST00000589076 ZNF222Q9UK12 451 aa2.09□□□□□ -2.07
SMAD4-207ENST00000589076 SAR1BQ9Y6B6 198 aa2.09□□□□□ -2.07
SMAD4-207ENST00000589076 TMEM14AQ9Y6G1 99 aa2.09□□□□□ -2.07
SMAD4-207ENST00000589076 A0A0C4DFX4 3053 aa2.09□□□□□ -2.08
SMAD4-207ENST00000589076 JMJD1CQ15652 2540 aa2.09□□□□□ -2.08
SMAD4-207ENST00000589076 FHOD3Q2V2M9 1422 aa2.08□□□□□ -2.08
SMAD4-207ENST00000589076 MYO18BQ8IUG5 2567 aa2.08□□□□□ -2.08
SMAD4-207ENST00000589076 TUBGCP6Q96RT7 1819 aa2.08□□□□□ -2.08
SMAD4-207ENST00000589076 TRAV25A0A0B4J276 109 aa2.08□□□□□ -2.08
SMAD4-207ENST00000589076 A0A1B0GW55 424 aa2.08□□□□□ -2.08
SMAD4-207ENST00000589076 A6NDN8 102 aa2.08□□□□□ -2.08
SMAD4-207ENST00000589076 LRRIQ4A6NIV6 560 aa2.08□□□□□ -2.08
SMAD4-207ENST00000589076 M0R3G1 203 aa2.08□□□□□ -2.08
SMAD4-207ENST00000589076 CDC40O60508 579 aaKnown RBP eCLIP2.08□□□□□ -2.08
SMAD4-207ENST00000589076 DNAJB6O75190 326 aa2.08□□□□□ -2.08
SMAD4-207ENST00000589076 YIF1AO95070 293 aa2.08□□□□□ -2.08
SMAD4-207ENST00000589076 WISP3O95389 354 aaPredicted RBP2.08□□□□□ -2.08
SMAD4-207ENST00000589076 EIF4EP06730 217 aaKnown RBP2.08□□□□□ -2.08
SMAD4-207ENST00000589076 CTSLP07711 333 aa2.08□□□□□ -2.08
SMAD4-207ENST00000589076 CLTAP09496 248 aa2.08□□□□□ -2.08
SMAD4-207ENST00000589076 CD3GP09693 182 aa2.08□□□□□ -2.08
SMAD4-207ENST00000589076 DUX4L2P0CJ85 424 aa2.08□□□□□ -2.08
SMAD4-207ENST00000589076 DUX4L3P0CJ86 424 aa2.08□□□□□ -2.08
SMAD4-207ENST00000589076 DUX4L5P0CJ88 424 aa2.08□□□□□ -2.08
SMAD4-207ENST00000589076 DUX4L6P0CJ89 424 aa2.08□□□□□ -2.08
SMAD4-207ENST00000589076 DUX4L7P0CJ90 424 aa2.08□□□□□ -2.08
SMAD4-207ENST00000589076 ERGP11308 486 aa2.08□□□□□ -2.08
SMAD4-207ENST00000589076 DTYMKP23919 212 aa2.08□□□□□ -2.08
SMAD4-207ENST00000589076 U2AF2P26368 475 aaKnown RBP eCLIP2.08□□□□□ -2.082e-6■■■□□ 17.2
SMAD4-207ENST00000589076 HCAR3P49019 387 aa2.08□□□□□ -2.08
SMAD4-207ENST00000589076 EIF4EBP1Q13541 118 aaPredicted RBP2.08□□□□□ -2.08
SMAD4-207ENST00000589076 RCAN2Q14206 197 aa2.08□□□□□ -2.08
SMAD4-207ENST00000589076 KIR2DS1Q14954 304 aa2.08□□□□□ -2.08
SMAD4-207ENST00000589076 LINC00483Q53H64 154 aa2.08□□□□□ -2.08
SMAD4-207ENST00000589076 BEX5Q5H9J7 111 aa2.08□□□□□ -2.08
SMAD4-207ENST00000589076 TPTE2P1Q5T6R2 138 aa2.08□□□□□ -2.08
SMAD4-207ENST00000589076 CEMP1Q6PRD7 247 aaPredicted RBP2.08□□□□□ -2.08
SMAD4-207ENST00000589076 CLEC2AQ6UVW9 174 aa2.08□□□□□ -2.08
SMAD4-207ENST00000589076 MBOAT2Q6ZWT7 520 aa2.08□□□□□ -2.08
SMAD4-207ENST00000589076 ABHD12BQ7Z5M8 362 aaPredicted RBP2.08□□□□□ -2.08
SMAD4-207ENST00000589076 UBALD2Q8IYN6 164 aa2.08□□□□□ -2.08
SMAD4-207ENST00000589076 CBR4Q8N4T8 237 aa2.08□□□□□ -2.08
SMAD4-207ENST00000589076 OR52E2Q8NGJ4 325 aa2.08□□□□□ -2.08
SMAD4-207ENST00000589076 OR6Q1Q8NGQ2 317 aa2.08□□□□□ -2.08
SMAD4-207ENST00000589076 COQ8AQ8NI60 647 aa2.08□□□□□ -2.08
SMAD4-207ENST00000589076 PIFOQ8TCI5 191 aa2.08□□□□□ -2.08
SMAD4-207ENST00000589076 APH1BQ8WW43 257 aa2.08□□□□□ -2.08
SMAD4-207ENST00000589076 JSRP1Q96MG2 331 aaPredicted RBP2.08□□□□□ -2.08
SMAD4-207ENST00000589076 OPALINQ96PE5 141 aa2.08□□□□□ -2.08
SMAD4-207ENST00000589076 UCK2Q9BZX2 261 aa2.08□□□□□ -2.08
SMAD4-207ENST00000589076 IQCGQ9H095 443 aaKnown RBP2.08□□□□□ -2.08
SMAD4-207ENST00000589076 SPNS1Q9H2V7 528 aa2.08□□□□□ -2.08
SMAD4-207ENST00000589076 ZNF355PQ9NSJ1 428 aa2.08□□□□□ -2.08
SMAD4-207ENST00000589076 DUX4Q9UBX2 424 aa2.08□□□□□ -2.08
SMAD4-207ENST00000589076 TBC1D24Q9ULP9 559 aa2.08□□□□□ -2.08
SMAD4-207ENST00000589076 PCNTO95613 3336 aa2.08□□□□□ -2.08
SMAD4-207ENST00000589076 PLEKHG2Q9H7P9 1386 aa2.08□□□□□ -2.08
SMAD4-207ENST00000589076 RDH16O75452 317 aa2.07□□□□□ -2.08
SMAD4-207ENST00000589076 HBE1P02100 147 aa2.07□□□□□ -2.08
SMAD4-207ENST00000589076 ASGR1P07306 291 aa2.07□□□□□ -2.08
SMAD4-207ENST00000589076 MRPL3P09001 348 aaKnown RBP2.07□□□□□ -2.08
SMAD4-207ENST00000589076 OR8G3PP0DMU2 310 aa2.07□□□□□ -2.08
SMAD4-207ENST00000589076 CTRB1P17538 263 aa2.07□□□□□ -2.08
SMAD4-207ENST00000589076 SSTR5P35346 364 aa2.07□□□□□ -2.08
SMAD4-207ENST00000589076 LINC00315P59091 139 aa2.07□□□□□ -2.08
SMAD4-207ENST00000589076 PPP1CBP62140 327 aa2.07□□□□□ -2.08
SMAD4-207ENST00000589076 LOXL1Q08397 574 aaPredicted RBP2.07□□□□□ -2.08
SMAD4-207ENST00000589076 ITIH4Q14624 930 aa2.07□□□□□ -2.08
SMAD4-207ENST00000589076 NCF4Q15080 339 aa2.07□□□□□ -2.08
SMAD4-207ENST00000589076 STK11Q15831 433 aa2.07□□□□□ -2.08
SMAD4-207ENST00000589076 C5orf47Q569G3 176 aa2.07□□□□□ -2.08
SMAD4-207ENST00000589076 FAM78AQ5JUQ0 283 aa2.07□□□□□ -2.08
SMAD4-207ENST00000589076 AVPI1Q5T686 147 aa2.07□□□□□ -2.08
SMAD4-207ENST00000589076 C1orf185Q5T7R7 199 aa2.07□□□□□ -2.08
SMAD4-207ENST00000589076 FBXW9Q5XUX1 488 aa2.07□□□□□ -2.08
SMAD4-207ENST00000589076 PRMT9Q6P2P2 845 aa2.07□□□□□ -2.08
SMAD4-207ENST00000589076 ANGPTL8Q6UXH0 198 aa2.07□□□□□ -2.08
SMAD4-207ENST00000589076 Q6ZR03 302 aa2.07□□□□□ -2.08
SMAD4-207ENST00000589076 NTM-AS1Q6ZSK4 140 aa2.07□□□□□ -2.08
SMAD4-207ENST00000589076 BHLHA15Q7RTS1 189 aaPredicted RBP2.07□□□□□ -2.08
SMAD4-207ENST00000589076 MRPL55Q7Z7F7 128 aaKnown RBP2.07□□□□□ -2.08
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms