RNA–Protein interactions for RNA: ENST00000588937.5

MBD1-217, Transcript of methyl-CpG binding domain protein 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene MBD1, Length 1,761 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MBD1-217ENST00000588937 A0A0A6YYH2 397 aa13.55□□□□□ -0.24
MBD1-217ENST00000588937 TMEM272A0A1B0GTI8 110 aa13.55□□□□□ -0.24
MBD1-217ENST00000588937 LOC390937A0A1W2PQ73 354 aa13.55□□□□□ -0.24
MBD1-217ENST00000588937 A6NJ64 397 aa13.55□□□□□ -0.24
MBD1-217ENST00000588937 H7C417 338 aa13.55□□□□□ -0.24
MBD1-217ENST00000588937 DNPH1O43598 174 aa13.55□□□□□ -0.24
MBD1-217ENST00000588937 PEX14O75381 377 aa13.55□□□□□ -0.24
MBD1-217ENST00000588937 CSF1P09603 554 aa13.55□□□□□ -0.24
MBD1-217ENST00000588937 ACSM4P0C7M7 580 aa13.55□□□□□ -0.24
MBD1-217ENST00000588937 TMIGD3P0DMS9 266 aaPredicted RBP13.55□□□□□ -0.24
MBD1-217ENST00000588937 GZMKP49863 264 aa13.55□□□□□ -0.24
MBD1-217ENST00000588937 PSMA6P60900 246 aaKnown RBP13.55□□□□□ -0.24
MBD1-217ENST00000588937 GLYATL3Q5SZD4 288 aa13.55□□□□□ -0.24
MBD1-217ENST00000588937 SLC25A28Q96A46 364 aa13.55□□□□□ -0.24
MBD1-217ENST00000588937 PTX4Q96A99 478 aa13.55□□□□□ -0.24
MBD1-217ENST00000588937 PNPLA2Q96AD5 504 aa13.55□□□□□ -0.24
MBD1-217ENST00000588937 EMC7Q9NPA0 242 aa13.55□□□□□ -0.24
MBD1-217ENST00000588937 GLTPQ9NZD2 209 aa13.55□□□□□ -0.24
MBD1-217ENST00000588937 MTFP1Q9UDX5 166 aa13.55□□□□□ -0.24
MBD1-217ENST00000588937 NPIPA2E9PIF3 369 aa13.55□□□□□ -0.24
MBD1-217ENST00000588937 NPIPA3F8WFD2 350 aa13.55□□□□□ -0.24
MBD1-217ENST00000588937 SYT7O43581 403 aa13.55□□□□□ -0.24
MBD1-217ENST00000588937 GMDSO60547 372 aa13.55□□□□□ -0.24
MBD1-217ENST00000588937 LRP3O75074 770 aa13.55□□□□□ -0.24
MBD1-217ENST00000588937 TTRP02766 147 aa13.55□□□□□ -0.24
MBD1-217ENST00000588937 CD59P13987 128 aa13.55□□□□□ -0.24
MBD1-217ENST00000588937 SRD5A2P31213 254 aa13.55□□□□□ -0.24
MBD1-217ENST00000588937 CSNK1A1P48729 337 aa13.55□□□□□ -0.24
MBD1-217ENST00000588937 LSM6P62312 80 aaKnown RBP13.55□□□□□ -0.24
MBD1-217ENST00000588937 SF3B4Q15427 424 aaKnown RBP eCLIP13.55□□□□□ -0.241e-6■■■■■ 30.7
MBD1-217ENST00000588937 FCN2Q15485 313 aa13.55□□□□□ -0.24
MBD1-217ENST00000588937 C1orf100Q5SVJ3 147 aa13.55□□□□□ -0.24
MBD1-217ENST00000588937 H3F3CQ6NXT2 135 aa13.55□□□□□ -0.24
MBD1-217ENST00000588937 CFAP77Q6ZQR2 320 aa13.55□□□□□ -0.24
MBD1-217ENST00000588937 CREB3L2Q70SY1 520 aa13.55□□□□□ -0.24
MBD1-217ENST00000588937 ADGRE4PQ86SQ3 457 aa13.55□□□□□ -0.24
MBD1-217ENST00000588937 JAGN1Q8N5M9 183 aa13.55□□□□□ -0.24
MBD1-217ENST00000588937 OR10S1Q8NGN2 331 aa13.55□□□□□ -0.24
MBD1-217ENST00000588937 KCNE4Q8WWG9 221 aa13.55□□□□□ -0.24
MBD1-217ENST00000588937 GIMAP1Q8WWP7 306 aa13.55□□□□□ -0.24
MBD1-217ENST00000588937 ITFG2Q969R8 447 aa13.55□□□□□ -0.24
MBD1-217ENST00000588937 SORCS2Q96PQ0 1159 aa13.55□□□□□ -0.24
MBD1-217ENST00000588937 ATG5Q9H1Y0 275 aa13.55□□□□□ -0.24
MBD1-217ENST00000588937 SLA2Q9H6Q3 261 aa13.55□□□□□ -0.24
MBD1-217ENST00000588937 OTOGLQ3ZCN5 2332 aa13.54□□□□□ -0.24
MBD1-217ENST00000588937 KIF26BQ2KJY2 2108 aa13.54□□□□□ -0.24
MBD1-217ENST00000588937 A0A1B0GVI7 797 aa13.54□□□□□ -0.24
MBD1-217ENST00000588937 CIB4A0PJX0 185 aa13.54□□□□□ -0.24
MBD1-217ENST00000588937 SULT1C2O00338 296 aa13.54□□□□□ -0.24
MBD1-217ENST00000588937 RAMP1O60894 148 aa13.54□□□□□ -0.24
MBD1-217ENST00000588937 SERPINA7P05543 415 aa13.54□□□□□ -0.24
MBD1-217ENST00000588937 GABRA1P14867 456 aa13.54□□□□□ -0.24
MBD1-217ENST00000588937 BDKRB2P30411 391 aa13.54□□□□□ -0.24
MBD1-217ENST00000588937 PRSS3P35030 304 aa13.54□□□□□ -0.24
MBD1-217ENST00000588937 EFNB2P52799 333 aa13.54□□□□□ -0.24
MBD1-217ENST00000588937 RPS18P62269 152 aaKnown RBP13.54□□□□□ -0.24
MBD1-217ENST00000588937 GRB2P62993 217 aaKnown RBP13.54□□□□□ -0.24
MBD1-217ENST00000588937 PLA2G7Q13093 441 aa13.54□□□□□ -0.24
MBD1-217ENST00000588937 TNK1Q13470 666 aa13.54□□□□□ -0.24
MBD1-217ENST00000588937 BCL2A1Q16548 175 aa13.54□□□□□ -0.24
MBD1-217ENST00000588937 SFRP4Q6FHJ7 346 aaPredicted RBP13.54□□□□□ -0.24
MBD1-217ENST00000588937 TIPARPQ7Z3E1 657 aaKnown RBP13.54□□□□□ -0.24
MBD1-217ENST00000588937 ASCC1Q8N9N2 400 aaKnown RBP13.54□□□□□ -0.24
MBD1-217ENST00000588937 OR6N1Q8NGY5 312 aa13.54□□□□□ -0.24
MBD1-217ENST00000588937 ZFAND1Q8TCF1 268 aa13.54□□□□□ -0.24
MBD1-217ENST00000588937 INTS12Q96CB8 462 aaKnown RBP13.54□□□□□ -0.24
MBD1-217ENST00000588937 LIN37Q96GY3 246 aaPredicted RBP13.54□□□□□ -0.24
MBD1-217ENST00000588937 HYLS1Q96M11 299 aa13.54□□□□□ -0.24
MBD1-217ENST00000588937 ING4Q9UNL4 249 aa13.54□□□□□ -0.24
MBD1-217ENST00000588937 TRAV18A0A075B6X5 111 aa13.53□□□□□ -0.24
MBD1-217ENST00000588937 DCDC2BA2VCK2 349 aa13.53□□□□□ -0.24
MBD1-217ENST00000588937 G3V3Y1 287 aa13.53□□□□□ -0.24
MBD1-217ENST00000588937 ERCC1P07992 297 aaPredicted RBP13.53□□□□□ -0.24
MBD1-217ENST00000588937 CDAP32320 146 aa13.53□□□□□ -0.24
MBD1-217ENST00000588937 ZNF133P52736 654 aaPredicted RBP13.53□□□□□ -0.24
MBD1-217ENST00000588937 SPOCK1Q08629 439 aa13.53□□□□□ -0.24
MBD1-217ENST00000588937 MFAP5Q13361 173 aa13.53□□□□□ -0.24
MBD1-217ENST00000588937 C10orf128Q5T292 105 aa13.53□□□□□ -0.24
MBD1-217ENST00000588937 METTL11BQ5VVY1 283 aa13.53□□□□□ -0.24
MBD1-217ENST00000588937 UTS2BQ765I0 119 aa13.53□□□□□ -0.24
MBD1-217ENST00000588937 OR51A2Q8NGJ7 313 aa13.53□□□□□ -0.24
MBD1-217ENST00000588937 OR5D14Q8NGL3 314 aa13.53□□□□□ -0.24
MBD1-217ENST00000588937 TMEM54Q969K7 222 aa13.53□□□□□ -0.24
MBD1-217ENST00000588937 DACT3Q96B18 629 aaPredicted RBP13.53□□□□□ -0.24
MBD1-217ENST00000588937 FGGYQ96C11 551 aa13.53□□□□□ -0.24
MBD1-217ENST00000588937 TMEM246Q9BRR3 403 aa13.53□□□□□ -0.24
MBD1-217ENST00000588937 ASH2LQ9UBL3 628 aa13.53□□□□□ -0.24
MBD1-217ENST00000588937 TGM6O95932 706 aa13.53□□□□□ -0.24
MBD1-217ENST00000588937 ANXA3P12429 323 aa13.53□□□□□ -0.24
MBD1-217ENST00000588937 RAB6AP20340 208 aa13.53□□□□□ -0.24
MBD1-217ENST00000588937 GNALP38405 381 aa13.53□□□□□ -0.24
MBD1-217ENST00000588937 TCF15Q12870 199 aa13.53□□□□□ -0.24
MBD1-217ENST00000588937 PCGF3Q3KNV8 242 aa13.53□□□□□ -0.24
MBD1-217ENST00000588937 CCDC157Q569K6 752 aa13.53□□□□□ -0.24
MBD1-217ENST00000588937 TMEM164Q5U3C3 297 aa13.53□□□□□ -0.24
MBD1-217ENST00000588937 ZNF468Q5VIY5 522 aaPredicted RBP13.53□□□□□ -0.24
MBD1-217ENST00000588937 SLC25A25Q6KCM7 469 aa13.53□□□□□ -0.24
MBD1-217ENST00000588937 OR9K2Q8NGE7 335 aa13.53□□□□□ -0.24
MBD1-217ENST00000588937 UQCC2Q9BRT2 126 aa13.53□□□□□ -0.24
MBD1-217ENST00000588937 SF3B5Q9BWJ5 86 aaKnown RBP13.53□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 44.7 ms