RNA–Protein interactions for RNA: ENST00000588917.2

CIRBP-220, Transcript of cold inducible RNA binding protein, humanhuman

TSL 2

Gene CIRBP, Length 1,087 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIRBP-220ENST00000588917 OR2T7P0C7T2 308 aa16.93■□□□□ 0.3
CIRBP-220ENST00000588917 ALOX5APP20292 161 aa16.93■□□□□ 0.3
CIRBP-220ENST00000588917 RGS6P49758 472 aa16.93■□□□□ 0.3
CIRBP-220ENST00000588917 UCP2P55851 309 aa16.93■□□□□ 0.3
CIRBP-220ENST00000588917 TPTEP56180 551 aa16.93■□□□□ 0.3
CIRBP-220ENST00000588917 RPS23P62266 143 aaKnown RBP16.93■□□□□ 0.3
CIRBP-220ENST00000588917 GRB2P62993 217 aaKnown RBP16.93■□□□□ 0.3
CIRBP-220ENST00000588917 KLHL22Q53GT1 634 aa16.93■□□□□ 0.3
CIRBP-220ENST00000588917 DEGS2Q6QHC5 323 aa16.93■□□□□ 0.3
CIRBP-220ENST00000588917 USP51Q70EK9 711 aa16.93■□□□□ 0.3
CIRBP-220ENST00000588917 HIST2H2ABQ8IUE6 130 aaPredicted RBP16.93■□□□□ 0.3
CIRBP-220ENST00000588917 KBTBD8Q8NFY9 601 aa16.93■□□□□ 0.3
CIRBP-220ENST00000588917 OR51G2Q8NGK0 314 aa16.93■□□□□ 0.3
CIRBP-220ENST00000588917 OR2T27Q8NH04 317 aa16.93■□□□□ 0.3
CIRBP-220ENST00000588917 ST7LQ8TDW4 575 aa16.93■□□□□ 0.3
CIRBP-220ENST00000588917 FBXW5Q969U6 566 aa16.93■□□□□ 0.3
CIRBP-220ENST00000588917 COG8Q96MW5 612 aa16.93■□□□□ 0.3
CIRBP-220ENST00000588917 ADGRL4Q9HBW9 690 aa16.93■□□□□ 0.3
CIRBP-220ENST00000588917 DDX28Q9NUL7 540 aaKnown RBP16.93■□□□□ 0.3
CIRBP-220ENST00000588917 ITGB1BP2Q9UKP3 347 aa16.93■□□□□ 0.3
CIRBP-220ENST00000588917 RAB26Q9ULW5 256 aa16.93■□□□□ 0.3
CIRBP-220ENST00000588917 ZNF670-ZNF695F2Z2N8 137 aa16.92■□□□□ 0.3
CIRBP-220ENST00000588917 J3QW42 95 aa16.92■□□□□ 0.3
CIRBP-220ENST00000588917 HS3ST1O14792 307 aa16.92■□□□□ 0.3
CIRBP-220ENST00000588917 ICMTO60725 284 aa16.92■□□□□ 0.3
CIRBP-220ENST00000588917 MRPL3P09001 348 aaKnown RBP16.92■□□□□ 0.3
CIRBP-220ENST00000588917 CCL2P13500 99 aa16.92■□□□□ 0.3
CIRBP-220ENST00000588917 APOBEC3AP31941 199 aaPredicted RBP16.92■□□□□ 0.3
CIRBP-220ENST00000588917 GLRXP35754 106 aa16.92■□□□□ 0.3
CIRBP-220ENST00000588917 CSNK2BP67870 215 aa16.92■□□□□ 0.3
CIRBP-220ENST00000588917 C6orf52Q5T4I8 152 aa16.92■□□□□ 0.3
CIRBP-220ENST00000588917 ZNF544Q6NX49 715 aa16.92■□□□□ 0.3
CIRBP-220ENST00000588917 SLC35F2Q8IXU6 374 aa16.92■□□□□ 0.3
CIRBP-220ENST00000588917 ZNF611Q8N823 705 aa16.92■□□□□ 0.3
CIRBP-220ENST00000588917 RNF133Q8WVZ7 376 aa16.92■□□□□ 0.3
CIRBP-220ENST00000588917 RNFT2Q96EX2 444 aa16.92■□□□□ 0.3
CIRBP-220ENST00000588917 C4orf45Q96LM5 186 aa16.92■□□□□ 0.3
CIRBP-220ENST00000588917 DHRS9Q9BPW9 319 aa16.92■□□□□ 0.3
CIRBP-220ENST00000588917 NIPAL2Q9H841 368 aa16.92■□□□□ 0.3
CIRBP-220ENST00000588917 PLEKHF2Q9H8W4 249 aa16.92■□□□□ 0.3
CIRBP-220ENST00000588917 SP140LQ9H930 580 aa16.92■□□□□ 0.3
CIRBP-220ENST00000588917 PNRC2Q9NPJ4 139 aaKnown RBP16.92■□□□□ 0.3
CIRBP-220ENST00000588917 TBCCD1Q9NVR7 557 aa16.92■□□□□ 0.3
CIRBP-220ENST00000588917 IRGMA1A4Y4 181 aa16.91■□□□□ 0.3
CIRBP-220ENST00000588917 H2BFMP0C1H6 154 aa16.91■□□□□ 0.3
CIRBP-220ENST00000588917 HGFACQ04756 655 aa16.91■□□□□ 0.3
CIRBP-220ENST00000588917 SPOCK1Q08629 439 aa16.91■□□□□ 0.3
CIRBP-220ENST00000588917 RAB40BQ12829 278 aa16.91■□□□□ 0.3
CIRBP-220ENST00000588917 CDK5R2Q13319 367 aa16.91■□□□□ 0.3
CIRBP-220ENST00000588917 C20orf204Q6ZNR8 217 aa16.91■□□□□ 0.3
CIRBP-220ENST00000588917 OR5L1Q8NGL2 311 aa16.91■□□□□ 0.3
CIRBP-220ENST00000588917 LILRB1Q8NHL6 650 aaPredicted RBP16.91■□□□□ 0.3
CIRBP-220ENST00000588917 KCNJ15Q99712 375 aa16.91■□□□□ 0.3
CIRBP-220ENST00000588917 COPS4Q9BT78 406 aa16.91■□□□□ 0.3
CIRBP-220ENST00000588917 MROQ9BYG7 248 aa16.91■□□□□ 0.3
CIRBP-220ENST00000588917 Q9H521 79 aa16.91■□□□□ 0.3
CIRBP-220ENST00000588917 ZNF442Q9H7R0 627 aa16.91■□□□□ 0.3
CIRBP-220ENST00000588917 CA10Q9NS85 328 aa16.91■□□□□ 0.3
CIRBP-220ENST00000588917 MRPS18AQ9NVS2 196 aaKnown RBP16.91■□□□□ 0.3
CIRBP-220ENST00000588917 EXOGQ9Y2C4 368 aaKnown RBP16.91■□□□□ 0.3
CIRBP-220ENST00000588917 GRIP1Q9Y3R0 1128 aa16.91■□□□□ 0.3
CIRBP-220ENST00000588917 HIVEP1P15822 2718 aa16.91■□□□□ 0.3
CIRBP-220ENST00000588917 E7EQL1 145 aa16.9■□□□□ 0.3
CIRBP-220ENST00000588917 F5H5K5 113 aa16.9■□□□□ 0.3
CIRBP-220ENST00000588917 ZNF254O75437 659 aa16.9■□□□□ 0.3
CIRBP-220ENST00000588917 WBP4O75554 376 aaKnown RBP16.9■□□□□ 0.3
CIRBP-220ENST00000588917 FADS2O95864 444 aaKnown RBP16.9■□□□□ 0.3
CIRBP-220ENST00000588917 ABHD16AO95870 558 aa16.9■□□□□ 0.3
CIRBP-220ENST00000588917 GNAO1P09471 354 aa16.9■□□□□ 0.3
CIRBP-220ENST00000588917 DBTP11182 482 aaKnown RBP16.9■□□□□ 0.3
CIRBP-220ENST00000588917 HSD11B1P28845 292 aa16.9■□□□□ 0.3
CIRBP-220ENST00000588917 FABP6P51161 128 aa16.9■□□□□ 0.3
CIRBP-220ENST00000588917 ACTC1P68032 377 aa16.9■□□□□ 0.3
CIRBP-220ENST00000588917 ACTA1P68133 377 aa16.9■□□□□ 0.3
CIRBP-220ENST00000588917 NKX6-1P78426 367 aaPredicted RBP16.9■□□□□ 0.3
CIRBP-220ENST00000588917 SNTB2Q13425 540 aaKnown RBP16.9■□□□□ 0.3
CIRBP-220ENST00000588917 KRT80Q6KB66 452 aa16.9■□□□□ 0.3
CIRBP-220ENST00000588917 DRAM2Q6UX65 266 aa16.9■□□□□ 0.3
CIRBP-220ENST00000588917 KRT77Q7Z794 578 aa16.9■□□□□ 0.3
CIRBP-220ENST00000588917 APH1BQ8WW43 257 aa16.9■□□□□ 0.3
CIRBP-220ENST00000588917 MRPL48Q96GC5 212 aaKnown RBP16.9■□□□□ 0.3
CIRBP-220ENST00000588917 ZNF184Q99676 751 aaPredicted RBP16.9■□□□□ 0.3
CIRBP-220ENST00000588917 UBTD1Q9HAC8 227 aa16.9■□□□□ 0.3
CIRBP-220ENST00000588917 AASSQ9UDR5 926 aa16.9■□□□□ 0.3
CIRBP-220ENST00000588917 FBXO9Q9UK97 447 aaPredicted RBP16.9■□□□□ 0.3
CIRBP-220ENST00000588917 CMAHPQ9Y471 501 aa16.9■□□□□ 0.3
CIRBP-220ENST00000588917 C2CD3Q4AC94 2353 aa16.9■□□□□ 0.3
CIRBP-220ENST00000588917 BMP4P12644 408 aa16.89■□□□□ 0.29
CIRBP-220ENST00000588917 DCTDP32321 178 aa16.89■□□□□ 0.29
CIRBP-220ENST00000588917 HCCSP53701 268 aa16.89■□□□□ 0.29
CIRBP-220ENST00000588917 SELENOVP59797 346 aa16.89■□□□□ 0.29
CIRBP-220ENST00000588917 KRTAP10-9P60411 292 aa16.89■□□□□ 0.29
CIRBP-220ENST00000588917 ROM1Q03395 351 aa16.89■□□□□ 0.29
CIRBP-220ENST00000588917 ZNF91Q05481 1191 aa16.89■□□□□ 0.29
CIRBP-220ENST00000588917 EGR3Q06889 387 aa16.89■□□□□ 0.29
CIRBP-220ENST00000588917 KRTAP27-1Q3LI81 207 aa16.89■□□□□ 0.29
CIRBP-220ENST00000588917 EGFL6Q8IUX8 553 aa16.89■□□□□ 0.29
CIRBP-220ENST00000588917 ZNF679Q8IYX0 411 aa16.89■□□□□ 0.29
CIRBP-220ENST00000588917 FBXL14Q8N1E6 418 aa16.89■□□□□ 0.29
CIRBP-220ENST00000588917 PAQR4Q8N4S7 273 aaPredicted RBP16.89■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 63.8 ms