RNA–Protein interactions for RNA: ENST00000588857.5

ATG4D-209, Transcript of autophagy related 4D cysteine peptidase, humanhuman

TSL 1 (best)

Gene ATG4D, Length 1,555 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4D-209ENST00000588857 STARD4Q96DR4 205 aa19.5■□□□□ 0.71
ATG4D-209ENST00000588857 COQ7Q99807 217 aa19.5■□□□□ 0.71
ATG4D-209ENST00000588857 ATF6BQ99941 703 aa19.5■□□□□ 0.71
ATG4D-209ENST00000588857 HDHD5Q9BXW7 423 aa19.5■□□□□ 0.71
ATG4D-209ENST00000588857 DDX28Q9NUL7 540 aaKnown RBP19.5■□□□□ 0.71
ATG4D-209ENST00000588857 FRRS1LQ9P0K9 344 aa19.5■□□□□ 0.71
ATG4D-209ENST00000588857 GCN1Q92616 2671 aaKnown RBP19.5■□□□□ 0.71
ATG4D-209ENST00000588857 SHANK1Q9Y566 2161 aa19.49■□□□□ 0.71
ATG4D-209ENST00000588857 TMEM269A0A1B0GVZ9 245 aa19.49■□□□□ 0.71
ATG4D-209ENST00000588857 TRDV1A0A1B0GX56 115 aa19.49■□□□□ 0.71
ATG4D-209ENST00000588857 RGS9O75916 674 aaPredicted RBP19.49■□□□□ 0.71
ATG4D-209ENST00000588857 IL18BPO95998 194 aa19.49■□□□□ 0.71
ATG4D-209ENST00000588857 ZNF32P17041 273 aa19.49■□□□□ 0.71
ATG4D-209ENST00000588857 CTSSP25774 331 aa19.49■□□□□ 0.71
ATG4D-209ENST00000588857 CCR9P51686 369 aa19.49■□□□□ 0.71
ATG4D-209ENST00000588857 CASP6P55212 293 aa19.49■□□□□ 0.71
ATG4D-209ENST00000588857 RAB35Q15286 201 aa19.49■□□□□ 0.71
ATG4D-209ENST00000588857 CCDC92Q53HC0 331 aaPredicted RBP19.49■□□□□ 0.71
ATG4D-209ENST00000588857 CD200R1LQ6Q8B3 271 aa19.49■□□□□ 0.71
ATG4D-209ENST00000588857 NAXEQ8NCW5 288 aa19.49■□□□□ 0.71
ATG4D-209ENST00000588857 PDCD1LG2Q9BQ51 273 aa19.49■□□□□ 0.71
ATG4D-209ENST00000588857 SFXN3Q9BWM7 321 aa19.49■□□□□ 0.71
ATG4D-209ENST00000588857 COMMD4Q9H0A8 199 aa19.49■□□□□ 0.71
ATG4D-209ENST00000588857 RNF121Q9H920 327 aa19.49■□□□□ 0.71
ATG4D-209ENST00000588857 SH3BGRL2Q9UJC5 107 aa19.49■□□□□ 0.71
ATG4D-209ENST00000588857 LOC110117498-PIK3R3F6TDL0 507 aa19.49■□□□□ 0.71
ATG4D-209ENST00000588857 ZFPL1O95159 310 aa19.49■□□□□ 0.71
ATG4D-209ENST00000588857 SERPINA3P01011 423 aa19.49■□□□□ 0.71
ATG4D-209ENST00000588857 PATE4P0C8F1 98 aa19.49■□□□□ 0.71
ATG4D-209ENST00000588857 GALP22466 123 aa19.49■□□□□ 0.71
ATG4D-209ENST00000588857 MFGE8Q08431 387 aaPredicted RBP19.49■□□□□ 0.71
ATG4D-209ENST00000588857 PMPCAQ10713 525 aa19.49■□□□□ 0.71
ATG4D-209ENST00000588857 ST6GALNAC3Q8NDV1 305 aa19.49■□□□□ 0.71
ATG4D-209ENST00000588857 C4orf45Q96LM5 186 aa19.49■□□□□ 0.71
ATG4D-209ENST00000588857 HDHD2Q9H0R4 259 aa19.49■□□□□ 0.71
ATG4D-209ENST00000588857 TXNL4BQ9NX01 149 aaKnown RBP19.49■□□□□ 0.71
ATG4D-209ENST00000588857 GALNT8Q9NY28 637 aa19.49■□□□□ 0.71
ATG4D-209ENST00000588857 GSTK1Q9Y2Q3 226 aa19.49■□□□□ 0.71
ATG4D-209ENST00000588857 ZNF281Q9Y2X9 895 aa19.49■□□□□ 0.71
ATG4D-209ENST00000588857 TMEM212A6NML5 194 aa19.48■□□□□ 0.71
ATG4D-209ENST00000588857 DOK2O60496 412 aa19.48■□□□□ 0.71
ATG4D-209ENST00000588857 PNPP00491 289 aa19.48■□□□□ 0.71
ATG4D-209ENST00000588857 CGAP01215 116 aa19.48■□□□□ 0.71
ATG4D-209ENST00000588857 IGHV1-2P23083 117 aa19.48■□□□□ 0.71
ATG4D-209ENST00000588857 MMP16P51512 607 aa19.48■□□□□ 0.71
ATG4D-209ENST00000588857 GALK2Q01415 458 aa19.48■□□□□ 0.71
ATG4D-209ENST00000588857 ECH1Q13011 328 aa19.48■□□□□ 0.71
ATG4D-209ENST00000588857 SPCS2Q15005 226 aa19.48■□□□□ 0.71
ATG4D-209ENST00000588857 WDR38Q5JTN6 314 aa19.48■□□□□ 0.71
ATG4D-209ENST00000588857 C22orf42Q6IC83 251 aa19.48■□□□□ 0.71
ATG4D-209ENST00000588857 CATSPERDQ86XM0 798 aa19.48■□□□□ 0.71
ATG4D-209ENST00000588857 PRSS35Q8N3Z0 413 aa19.48■□□□□ 0.71
ATG4D-209ENST00000588857 ZNF676Q8N7Q3 588 aa19.48■□□□□ 0.71
ATG4D-209ENST00000588857 ZNF610Q8N9Z0 462 aa19.48■□□□□ 0.71
ATG4D-209ENST00000588857 KBTBD8Q8NFY9 601 aa19.48■□□□□ 0.71
ATG4D-209ENST00000588857 ABHD4Q8TB40 342 aa19.48■□□□□ 0.71
ATG4D-209ENST00000588857 OR2H1Q9GZK4 316 aa19.48■□□□□ 0.71
ATG4D-209ENST00000588857 OPN3Q9H1Y3 402 aaPredicted RBP19.48■□□□□ 0.71
ATG4D-209ENST00000588857 A0A1W2PPW3 197 aa19.47■□□□□ 0.71
ATG4D-209ENST00000588857 OR4C45A6NMZ5 311 aa19.47■□□□□ 0.71
ATG4D-209ENST00000588857 GABRPO00591 440 aa19.47■□□□□ 0.71
ATG4D-209ENST00000588857 SRSF10O75494 262 aaKnown RBP19.47■□□□□ 0.71
ATG4D-209ENST00000588857 MMP7P09237 267 aaPredicted RBP19.47■□□□□ 0.71
ATG4D-209ENST00000588857 CD8BP10966 210 aa19.47■□□□□ 0.71
ATG4D-209ENST00000588857 FGF9P31371 208 aaPredicted RBP19.47■□□□□ 0.71
ATG4D-209ENST00000588857 PRKXP51817 358 aa19.47■□□□□ 0.71
ATG4D-209ENST00000588857 PSMA6P60900 246 aaKnown RBP19.47■□□□□ 0.71
ATG4D-209ENST00000588857 PSG4Q00888 419 aa19.47■□□□□ 0.71
ATG4D-209ENST00000588857 IGFBP7Q16270 282 aa19.47■□□□□ 0.71
ATG4D-209ENST00000588857 YIF1BQ5BJH7 314 aa19.47■□□□□ 0.71
ATG4D-209ENST00000588857 ZNF774Q6NX45 483 aa19.47■□□□□ 0.71
ATG4D-209ENST00000588857 BEND4Q6ZU67 534 aa19.47■□□□□ 0.71
ATG4D-209ENST00000588857 USP43Q70EL4 1123 aa19.47■□□□□ 0.71
ATG4D-209ENST00000588857 DPPA2Q7Z7J5 298 aa19.47■□□□□ 0.71
ATG4D-209ENST00000588857 FGFBP3Q8TAT2 258 aa19.47■□□□□ 0.71
ATG4D-209ENST00000588857 NDNFQ8TB73 568 aa19.47■□□□□ 0.71
ATG4D-209ENST00000588857 BCL2L2Q92843 193 aaPredicted RBP19.47■□□□□ 0.71
ATG4D-209ENST00000588857 SPTSSAQ969W0 71 aa19.47■□□□□ 0.71
ATG4D-209ENST00000588857 TRMT61AQ96FX7 289 aaKnown RBP19.47■□□□□ 0.71
ATG4D-209ENST00000588857 KCNJ15Q99712 375 aa19.47■□□□□ 0.71
ATG4D-209ENST00000588857 DCUN1D5Q9BTE7 237 aa19.47■□□□□ 0.71
ATG4D-209ENST00000588857 RNF167Q9H6Y7 350 aa19.47■□□□□ 0.71
ATG4D-209ENST00000588857 BRD7Q9NPI1 651 aa19.47■□□□□ 0.71
ATG4D-209ENST00000588857 OR52A1Q9UKL2 312 aa19.47■□□□□ 0.71
ATG4D-209ENST00000588857 CIB4A0PJX0 185 aa19.46■□□□□ 0.71
ATG4D-209ENST00000588857 TRIM64BA6NI03 449 aa19.46■□□□□ 0.71
ATG4D-209ENST00000588857 HLA-HP01893 362 aa19.46■□□□□ 0.71
ATG4D-209ENST00000588857 APOC1P02654 83 aa19.46■□□□□ 0.71
ATG4D-209ENST00000588857 CD79AP11912 226 aa19.46■□□□□ 0.71
ATG4D-209ENST00000588857 OPRM1P35372 400 aa19.46■□□□□ 0.71
ATG4D-209ENST00000588857 TGFBR1P36897 503 aa19.46■□□□□ 0.71
ATG4D-209ENST00000588857 KIR3DL2P43630 455 aa19.46■□□□□ 0.71
ATG4D-209ENST00000588857 HIKESHIQ53FT3 197 aa19.46■□□□□ 0.71
ATG4D-209ENST00000588857 BCL2L15Q5TBC7 163 aa19.46■□□□□ 0.71
ATG4D-209ENST00000588857 ALDH16A1Q8IZ83 802 aa19.46■□□□□ 0.71
ATG4D-209ENST00000588857 ZNF283Q8N7M2 679 aa19.46■□□□□ 0.71
ATG4D-209ENST00000588857 OR1F12Q8NHA8 337 aa19.46■□□□□ 0.71
ATG4D-209ENST00000588857 AKR7LQ8NHP1 331 aa19.46■□□□□ 0.71
ATG4D-209ENST00000588857 NANOS1Q8WY41 292 aaKnown RBP19.46■□□□□ 0.71
ATG4D-209ENST00000588857 WNT5BQ9H1J7 359 aa19.46■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms