RNA–Protein interactions for RNA: ENST00000588009.1

TUBD1-208, Transcript of tubulin delta 1, humanhuman

TSL 3

Gene TUBD1, Length 812 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBD1-208ENST00000588009 LCE1FQ5T754 118 aa3.83□□□□□ -1.8
TUBD1-208ENST00000588009 GPR107Q5VW38 600 aa3.83□□□□□ -1.8
TUBD1-208ENST00000588009 RSBN1Q5VWQ0 802 aaPredicted RBP3.83□□□□□ -1.8
TUBD1-208ENST00000588009 ANKRD22Q5VYY1 191 aa3.83□□□□□ -1.8
TUBD1-208ENST00000588009 SPINK14Q6IE38 97 aa3.83□□□□□ -1.8
TUBD1-208ENST00000588009 H2AFVQ71UI9 128 aa3.83□□□□□ -1.8
TUBD1-208ENST00000588009 MYOCDQ8IZQ8 938 aa3.83□□□□□ -1.8
TUBD1-208ENST00000588009 SUMF2Q8NBJ7 301 aa3.83□□□□□ -1.8
TUBD1-208ENST00000588009 CCDC54Q8NEL0 328 aa3.83□□□□□ -1.8
TUBD1-208ENST00000588009 LINC01006Q8NI28 216 aa3.83□□□□□ -1.8
TUBD1-208ENST00000588009 PIH1D2Q8WWB5 315 aa3.83□□□□□ -1.8
TUBD1-208ENST00000588009 SMIM10Q96HG1 83 aa3.83□□□□□ -1.8
TUBD1-208ENST00000588009 SIKE1Q9BRV8 207 aa3.83□□□□□ -1.8
TUBD1-208ENST00000588009 MRPL37Q9BZE1 423 aaKnown RBP3.83□□□□□ -1.8
TUBD1-208ENST00000588009 TMEM38AQ9H6F2 299 aa3.83□□□□□ -1.8
TUBD1-208ENST00000588009 SLCO1B3Q9NPD5 702 aa3.83□□□□□ -1.8
TUBD1-208ENST00000588009 TMEM9BQ9NQ34 198 aa3.83□□□□□ -1.8
TUBD1-208ENST00000588009 LZTFL1Q9NQ48 299 aa3.83□□□□□ -1.8
TUBD1-208ENST00000588009 PRSS16Q9NQE7 514 aa3.83□□□□□ -1.8
TUBD1-208ENST00000588009 CLN6Q9NWW5 311 aa3.83□□□□□ -1.8
TUBD1-208ENST00000588009 IL17CQ9P0M4 197 aa3.83□□□□□ -1.8
TUBD1-208ENST00000588009 DDX19BQ9UMR2 479 aa3.83□□□□□ -1.8
TUBD1-208ENST00000588009 YARS2Q9Y2Z4 477 aaKnown RBP3.83□□□□□ -1.8
TUBD1-208ENST00000588009 CENPJQ9HC77 1338 aaPredicted RBP3.83□□□□□ -1.8
TUBD1-208ENST00000588009 GPATCH8Q9UKJ3 1502 aaKnown RBP3.83□□□□□ -1.8
TUBD1-208ENST00000588009 DENND4AQ7Z401 1863 aa3.83□□□□□ -1.8
TUBD1-208ENST00000588009 KIDINS220Q9ULH0 1771 aa3.82□□□□□ -1.8
TUBD1-208ENST00000588009 IGLV3-10A0A075B6K4 115 aa3.82□□□□□ -1.8
TUBD1-208ENST00000588009 LOC100653049A0A140TA62 436 aa3.82□□□□□ -1.8
TUBD1-208ENST00000588009 PRSS37A4D1T9 235 aa3.82□□□□□ -1.8
TUBD1-208ENST00000588009 HAT1O14929 419 aa3.82□□□□□ -1.8
TUBD1-208ENST00000588009 FLOT1O75955 427 aa3.82□□□□□ -1.8
TUBD1-208ENST00000588009 KRT34O76011 436 aa3.82□□□□□ -1.8
TUBD1-208ENST00000588009 AQP8O94778 261 aa3.82□□□□□ -1.8
TUBD1-208ENST00000588009 FARS2O95363 451 aaKnown RBP3.82□□□□□ -1.8
TUBD1-208ENST00000588009 ARG1P05089 322 aa3.82□□□□□ -1.8
TUBD1-208ENST00000588009 CCDC172P0C7W6 258 aa3.82□□□□□ -1.8
TUBD1-208ENST00000588009 UBTFL6P0CB48 400 aaPredicted RBP3.82□□□□□ -1.8
TUBD1-208ENST00000588009 CTRLP40313 264 aa3.82□□□□□ -1.8
TUBD1-208ENST00000588009 RFC3P40938 356 aa3.82□□□□□ -1.8
TUBD1-208ENST00000588009 GPR1P46091 355 aa3.82□□□□□ -1.8
TUBD1-208ENST00000588009 RND2P52198 227 aa3.82□□□□□ -1.8
TUBD1-208ENST00000588009 NCBP2P52298 156 aaKnown RBP eCLIP3.82□□□□□ -1.8
TUBD1-208ENST00000588009 PSMD4P55036 377 aaKnown RBP3.82□□□□□ -1.8
TUBD1-208ENST00000588009 ZSCAN26Q16670 478 aa3.82□□□□□ -1.8
TUBD1-208ENST00000588009 RPEL1Q2QD12 228 aa3.82□□□□□ -1.8
TUBD1-208ENST00000588009 HSP90AA4PQ58FG1 418 aa3.82□□□□□ -1.8
TUBD1-208ENST00000588009 MREGQ8N565 214 aa3.82□□□□□ -1.8
TUBD1-208ENST00000588009 DCAF4L2Q8NA75 395 aa3.82□□□□□ -1.8
TUBD1-208ENST00000588009 OR2L5Q8NG80 312 aa3.82□□□□□ -1.8
TUBD1-208ENST00000588009 APH1AQ96BI3 265 aa3.82□□□□□ -1.8
TUBD1-208ENST00000588009 FAM3DQ96BQ1 224 aa3.82□□□□□ -1.8
TUBD1-208ENST00000588009 IMMP1LQ96LU5 166 aa3.82□□□□□ -1.8
TUBD1-208ENST00000588009 COL21A1Q96P44 957 aa3.82□□□□□ -1.8
TUBD1-208ENST00000588009 FOXC2Q99958 501 aa3.82□□□□□ -1.8
TUBD1-208ENST00000588009 YTHDF1Q9BYJ9 559 aaKnown RBP3.82□□□□□ -1.8
TUBD1-208ENST00000588009 MRM3Q9HC36 420 aaKnown RBP3.82□□□□□ -1.8
TUBD1-208ENST00000588009 MMP26Q9NRE1 261 aa3.82□□□□□ -1.8
TUBD1-208ENST00000588009 SLC25A37Q9NYZ2 338 aa3.82□□□□□ -1.8
TUBD1-208ENST00000588009 TRAPPC4Q9Y296 219 aa3.82□□□□□ -1.8
TUBD1-208ENST00000588009 MRPS18BQ9Y676 258 aaKnown RBP3.82□□□□□ -1.8
TUBD1-208ENST00000588009 AGRNO00468 2067 aa3.82□□□□□ -1.8
TUBD1-208ENST00000588009 PREX2Q70Z35 1606 aa3.81□□□□□ -1.8
TUBD1-208ENST00000588009 NEXMIFQ5QGS0 1516 aa3.81□□□□□ -1.8
TUBD1-208ENST00000588009 KCPQ6ZWJ8 1503 aa3.81□□□□□ -1.8
TUBD1-208ENST00000588009 GOLGA3Q08378 1498 aa3.81□□□□□ -1.8
TUBD1-208ENST00000588009 LAMA2P24043 3122 aaKnown RBP3.81□□□□□ -1.8
TUBD1-208ENST00000588009 KMOO15229 486 aa3.81□□□□□ -1.8
TUBD1-208ENST00000588009 HSBP1O75506 76 aa3.81□□□□□ -1.8
TUBD1-208ENST00000588009 CRISP2P16562 243 aa3.81□□□□□ -1.8
TUBD1-208ENST00000588009 PTNP21246 168 aa3.81□□□□□ -1.8
TUBD1-208ENST00000588009 CNR1P21554 472 aa3.81□□□□□ -1.8
TUBD1-208ENST00000588009 GNB2P62879 340 aa3.81□□□□□ -1.8
TUBD1-208ENST00000588009 LCN2P80188 198 aa3.81□□□□□ -1.8
TUBD1-208ENST00000588009 ZNF33AQ06730 810 aa3.81□□□□□ -1.8
TUBD1-208ENST00000588009 DAZ2Q13117 558 aaKnown RBP3.81□□□□□ -1.8
TUBD1-208ENST00000588009 PRPSAP1Q14558 356 aa3.81□□□□□ -1.8
TUBD1-208ENST00000588009 FHL5Q5TD97 284 aa3.81□□□□□ -1.8
TUBD1-208ENST00000588009 UBE2UQ5VVX9 321 aa3.81□□□□□ -1.8
TUBD1-208ENST00000588009 MLIPQ5VWP3 458 aa3.81□□□□□ -1.8
TUBD1-208ENST00000588009 TEX43Q6ZNM6 134 aa3.81□□□□□ -1.8
TUBD1-208ENST00000588009 COX15Q7KZN9 410 aa3.81□□□□□ -1.8
TUBD1-208ENST00000588009 OAFQ86UD1 273 aa3.81□□□□□ -1.8
TUBD1-208ENST00000588009 ZFP41Q8N8Y5 198 aa3.81□□□□□ -1.8
TUBD1-208ENST00000588009 TMEM104Q8NE00 496 aa3.81□□□□□ -1.8
TUBD1-208ENST00000588009 FBXO36Q8NEA4 188 aa3.81□□□□□ -1.8
TUBD1-208ENST00000588009 LRRC39Q96DD0 335 aa3.81□□□□□ -1.8
TUBD1-208ENST00000588009 TSSK3Q96PN8 268 aa3.81□□□□□ -1.8
TUBD1-208ENST00000588009 DEFB129Q9H1M3 183 aa3.81□□□□□ -1.8
TUBD1-208ENST00000588009 GAL3ST2Q9H3Q3 398 aa3.81□□□□□ -1.8
TUBD1-208ENST00000588009 HAUS4Q9H6D7 363 aa3.81□□□□□ -1.8
TUBD1-208ENST00000588009 DAZ3Q9NR90 486 aaKnown RBP3.81□□□□□ -1.8
TUBD1-208ENST00000588009 ABCB10Q9NRK6 738 aa3.81□□□□□ -1.8
TUBD1-208ENST00000588009 PCYOX1Q9UHG3 505 aa3.81□□□□□ -1.8
TUBD1-208ENST00000588009 STK38LQ9Y2H1 464 aa3.81□□□□□ -1.8
TUBD1-208ENST00000588009 BZW2Q9Y6E2 419 aaKnown RBP3.81□□□□□ -1.8
TUBD1-208ENST00000588009 VIRMAQ69YN4 1812 aaKnown RBP3.81□□□□□ -1.8
TUBD1-208ENST00000588009 ZNF318Q5VUA4 2279 aa3.81□□□□□ -1.8
TUBD1-208ENST00000588009 PXDNLA1KZ92 1463 aa3.8□□□□□ -1.8
TUBD1-208ENST00000588009 NCOA3Q9Y6Q9 1424 aa3.8□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms