RNA–Protein interactions for RNA: ENST00000587945.1

VMP1-206, Transcript of vacuole membrane protein 1, humanhuman

TSL 3

Gene VMP1, Length 583 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-206ENST00000587945 ESM1Q9NQ30 184 aa12.08□□□□□ -0.48
VMP1-206ENST00000587945 TUBG2Q9NRH3 451 aa12.08□□□□□ -0.48
VMP1-206ENST00000587945 IL19Q9UHD0 177 aa12.08□□□□□ -0.48
VMP1-206ENST00000587945 B9D1Q9UPM9 204 aa12.08□□□□□ -0.48
VMP1-206ENST00000587945 PPP1R3CQ9UQK1 317 aa12.08□□□□□ -0.48
VMP1-206ENST00000587945 LHFPL6Q9Y693 200 aa12.08□□□□□ -0.48
VMP1-206ENST00000587945 IGLV1-36A0A0B4J1U3 117 aa12.07□□□□□ -0.48
VMP1-206ENST00000587945 IGHV3-64DA0A0J9YX35 117 aa12.07□□□□□ -0.48
VMP1-206ENST00000587945 H0YL77 283 aa12.07□□□□□ -0.48
VMP1-206ENST00000587945 TRAPPC2LH3BP13 241 aa12.07□□□□□ -0.48
VMP1-206ENST00000587945 FOXH1O75593 365 aa12.07□□□□□ -0.48
VMP1-206ENST00000587945 ZNF205O95201 554 aa12.07□□□□□ -0.48
VMP1-206ENST00000587945 FSHBP01225 129 aa12.07□□□□□ -0.48
VMP1-206ENST00000587945 SEMG1P04279 462 aa12.07□□□□□ -0.48
VMP1-206ENST00000587945 RAC2P15153 192 aa12.07□□□□□ -0.48
VMP1-206ENST00000587945 TNFRSF1AP19438 455 aa12.07□□□□□ -0.48
VMP1-206ENST00000587945 GATA3P23771 443 aa12.07□□□□□ -0.48
VMP1-206ENST00000587945 PRDX6P30041 224 aa12.07□□□□□ -0.48
VMP1-206ENST00000587945 PRSS12P56730 875 aa12.07□□□□□ -0.48
VMP1-206ENST00000587945 BTG1P62324 171 aa12.07□□□□□ -0.48
VMP1-206ENST00000587945 KCNMB1Q16558 191 aa12.07□□□□□ -0.48
VMP1-206ENST00000587945 RFX4Q33E94 735 aa12.07□□□□□ -0.48
VMP1-206ENST00000587945 LEG1Q6P5S2 330 aa12.07□□□□□ -0.48
VMP1-206ENST00000587945 OR6V1Q8N148 313 aa12.07□□□□□ -0.48
VMP1-206ENST00000587945 BPIFB2Q8N4F0 458 aa12.07□□□□□ -0.48
VMP1-206ENST00000587945 KLHL36Q8N4N3 616 aa12.07□□□□□ -0.48
VMP1-206ENST00000587945 SPICQ8N5J4 248 aa12.07□□□□□ -0.48
VMP1-206ENST00000587945 DEFB108BQ8NET1 73 aa12.07□□□□□ -0.48
VMP1-206ENST00000587945 OR4K13Q8NH42 304 aa12.07□□□□□ -0.48
VMP1-206ENST00000587945 ZNF420Q8TAQ5 688 aaPredicted RBP12.07□□□□□ -0.48
VMP1-206ENST00000587945 FAM216AQ8WUB2 273 aa12.07□□□□□ -0.48
VMP1-206ENST00000587945 GCDHQ92947 438 aaPredicted RBP12.07□□□□□ -0.48
VMP1-206ENST00000587945 PYURFQ96I23 114 aa12.07□□□□□ -0.48
VMP1-206ENST00000587945 COG8Q96MW5 612 aa12.07□□□□□ -0.48
VMP1-206ENST00000587945 NMNAT3Q96T66 252 aa12.07□□□□□ -0.48
VMP1-206ENST00000587945 SUCNR1Q9BXA5 334 aa12.07□□□□□ -0.48
VMP1-206ENST00000587945 OR52D1Q9H346 318 aa12.07□□□□□ -0.48
VMP1-206ENST00000587945 GORASP2Q9H8Y8 452 aa12.07□□□□□ -0.48
VMP1-206ENST00000587945 PATZ1Q9HBE1 687 aaKnown RBP12.07□□□□□ -0.48
VMP1-206ENST00000587945 KRCC1Q9NPI7 259 aaPredicted RBP12.07□□□□□ -0.48
VMP1-206ENST00000587945 TMEM178BH3BS89 294 aa12.06□□□□□ -0.48
VMP1-206ENST00000587945 TRIM77I1YAP6 450 aa12.06□□□□□ -0.48
VMP1-206ENST00000587945 SURF4O15260 269 aa12.06□□□□□ -0.48
VMP1-206ENST00000587945 GADD45GO95257 159 aa12.06□□□□□ -0.48
VMP1-206ENST00000587945 HIST1H1CP16403 213 aaKnown RBP12.06□□□□□ -0.48
VMP1-206ENST00000587945 CRABP1P29762 137 aa12.06□□□□□ -0.48
VMP1-206ENST00000587945 MMP16P51512 607 aa12.06□□□□□ -0.48
VMP1-206ENST00000587945 HIST1H3AP68431 136 aa12.06□□□□□ -0.48
VMP1-206ENST00000587945 RSPO1Q2MKA7 263 aaPredicted RBP12.06□□□□□ -0.48
VMP1-206ENST00000587945 TMEM155Q4W5P6 130 aa12.06□□□□□ -0.48
VMP1-206ENST00000587945 HIST2H3PS2Q5TEC6 136 aa12.06□□□□□ -0.48
VMP1-206ENST00000587945 DNM1P34Q6PK57 102 aa12.06□□□□□ -0.48
VMP1-206ENST00000587945 FBXW12Q6X9E4 464 aa12.06□□□□□ -0.48
VMP1-206ENST00000587945 HIST2H3AQ71DI3 136 aa12.06□□□□□ -0.48
VMP1-206ENST00000587945 JAZF1Q86VZ6 243 aa12.06□□□□□ -0.48
VMP1-206ENST00000587945 LINC00346Q8IVM7 164 aa12.06□□□□□ -0.48
VMP1-206ENST00000587945 ZDHHC22Q8N966 263 aa12.06□□□□□ -0.48
VMP1-206ENST00000587945 BHLHE23Q8NDY6 225 aa12.06□□□□□ -0.48
VMP1-206ENST00000587945 GJC3Q8NFK1 279 aa12.06□□□□□ -0.48
VMP1-206ENST00000587945 OR5L1Q8NGL2 311 aa12.06□□□□□ -0.48
VMP1-206ENST00000587945 MEGF10Q96KG7 1140 aa12.06□□□□□ -0.48
VMP1-206ENST00000587945 COQ7Q99807 217 aa12.06□□□□□ -0.48
VMP1-206ENST00000587945 FN3KQ9H479 309 aa12.06□□□□□ -0.48
VMP1-206ENST00000587945 GCM1Q9NP62 436 aa12.06□□□□□ -0.48
VMP1-206ENST00000587945 PPIAL4EA0A075B759 164 aa12.05□□□□□ -0.48
VMP1-206ENST00000587945 PPIAL4CA0A0B4J2A2 164 aa12.05□□□□□ -0.48
VMP1-206ENST00000587945 TMEM89A2RUT3 159 aa12.05□□□□□ -0.48
VMP1-206ENST00000587945 F5H0A9 414 aaPredicted RBP12.05□□□□□ -0.48
VMP1-206ENST00000587945 PPIAL4DF5H284 164 aa12.05□□□□□ -0.48
VMP1-206ENST00000587945 OR10H3O60404 316 aa12.05□□□□□ -0.48
VMP1-206ENST00000587945 SNX3O60493 162 aa12.05□□□□□ -0.48
VMP1-206ENST00000587945 CYB5R3P00387 301 aaPredicted RBP12.05□□□□□ -0.48
VMP1-206ENST00000587945 RENP00797 406 aa12.05□□□□□ -0.48
VMP1-206ENST00000587945 PPIAL4FP0DN26 164 aa12.05□□□□□ -0.48
VMP1-206ENST00000587945 SLC6A6P31641 620 aa12.05□□□□□ -0.48
VMP1-206ENST00000587945 SLC6A9P48067 706 aa12.05□□□□□ -0.48
VMP1-206ENST00000587945 RGS6P49758 472 aa12.05□□□□□ -0.48
VMP1-206ENST00000587945 SMIM11AP58511 58 aa12.05□□□□□ -0.48
VMP1-206ENST00000587945 ZNF154Q13106 437 aa12.05□□□□□ -0.48
VMP1-206ENST00000587945 CFAP77Q6ZQR2 320 aa12.05□□□□□ -0.48
VMP1-206ENST00000587945 SLC26A10Q8NG04 563 aa12.05□□□□□ -0.48
VMP1-206ENST00000587945 OR8G5Q8NG78 346 aa12.05□□□□□ -0.48
VMP1-206ENST00000587945 OR13G1Q8NGZ3 307 aa12.05□□□□□ -0.48
VMP1-206ENST00000587945 DVL3Q92997 716 aaPredicted RBP12.05□□□□□ -0.48
VMP1-206ENST00000587945 APOBEC3DQ96AK3 386 aaPredicted RBP12.05□□□□□ -0.48
VMP1-206ENST00000587945 ZNF582Q96NG8 517 aaPredicted RBP12.05□□□□□ -0.48
VMP1-206ENST00000587945 JMJD8Q96S16 334 aa12.05□□□□□ -0.48
VMP1-206ENST00000587945 IFT27Q9BW83 186 aa12.05□□□□□ -0.48
VMP1-206ENST00000587945 RBM4Q9BWF3 364 aaKnown RBP12.05□□□□□ -0.48
VMP1-206ENST00000587945 PLA2G12AQ9BZM1 189 aa12.05□□□□□ -0.48
VMP1-206ENST00000587945 HDHD2Q9H0R4 259 aa12.05□□□□□ -0.48
VMP1-206ENST00000587945 RPRD1BQ9NQG5 326 aaKnown RBP12.05□□□□□ -0.48
VMP1-206ENST00000587945 ATPIF1Q9UII2 106 aa12.05□□□□□ -0.48
VMP1-206ENST00000587945 OR6C68A6NDL8 312 aa12.04□□□□□ -0.48
VMP1-206ENST00000587945 CEACAM18A8MTB9 384 aa12.04□□□□□ -0.48
VMP1-206ENST00000587945 F5H5K5 113 aa12.04□□□□□ -0.48
VMP1-206ENST00000587945 F5H5P2 479 aa12.04□□□□□ -0.48
VMP1-206ENST00000587945 J3QW42 95 aa12.04□□□□□ -0.48
VMP1-206ENST00000587945 ARPC2O15144 300 aa12.04□□□□□ -0.48
VMP1-206ENST00000587945 ARPC3O15145 178 aa12.04□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms