RNA–Protein interactions for RNA: ENST00000587260.1

NFIX-208, Transcript of nuclear factor I X, humanhuman

TSL 1 (best) BASIC

Gene NFIX, Length 1,537 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NFIX-208ENST00000587260 ACOXLQ9NUZ1 547 aa13.03□□□□□ -0.32
NFIX-208ENST00000587260 ZNF224Q9NZL3 707 aa13.03□□□□□ -0.32
NFIX-208ENST00000587260 IKZF2Q9UKS7 526 aa13.03□□□□□ -0.32
NFIX-208ENST00000587260 TIMM10BQ9Y5J6 103 aa13.03□□□□□ -0.32
NFIX-208ENST00000587260 HCFC1P51610 2035 aa13.02□□□□□ -0.32
NFIX-208ENST00000587260 ZNF878C9JN71 531 aa13.02□□□□□ -0.33
NFIX-208ENST00000587260 E9PI62 339 aa13.02□□□□□ -0.33
NFIX-208ENST00000587260 PSMD9O00233 223 aa13.02□□□□□ -0.33
NFIX-208ENST00000587260 PLPP2O43688 288 aa13.02□□□□□ -0.33
NFIX-208ENST00000587260 CD79AP11912 226 aa13.02□□□□□ -0.33
NFIX-208ENST00000587260 CD53P19397 219 aa13.02□□□□□ -0.33
NFIX-208ENST00000587260 UGT2B10P36537 528 aa13.02□□□□□ -0.33
NFIX-208ENST00000587260 TGFBR2P37173 567 aa13.02□□□□□ -0.33
NFIX-208ENST00000587260 RIDAP52758 137 aaKnown RBP13.02□□□□□ -0.33
NFIX-208ENST00000587260 UBE2NP61088 152 aaKnown RBP13.02□□□□□ -0.33
NFIX-208ENST00000587260 SNTB1Q13884 538 aaKnown RBP13.02□□□□□ -0.33
NFIX-208ENST00000587260 SSX1Q16384 188 aa13.02□□□□□ -0.33
NFIX-208ENST00000587260 TSTQ16762 297 aaKnown RBP13.02□□□□□ -0.33
NFIX-208ENST00000587260 SLC36A2Q495M3 483 aa13.02□□□□□ -0.33
NFIX-208ENST00000587260 CCDC92Q53HC0 331 aaPredicted RBP13.02□□□□□ -0.33
NFIX-208ENST00000587260 DMKNQ6E0U4 476 aaPredicted RBP13.02□□□□□ -0.33
NFIX-208ENST00000587260 OR7E24Q6IFN5 339 aa13.02□□□□□ -0.33
NFIX-208ENST00000587260 ALKBH2Q6NS38 261 aa13.02□□□□□ -0.33
NFIX-208ENST00000587260 RPL22L1Q6P5R6 122 aaKnown RBP13.02□□□□□ -0.33
NFIX-208ENST00000587260 XKRXQ6PP77 449 aa13.02□□□□□ -0.33
NFIX-208ENST00000587260 LRRN1Q6UXK5 716 aa13.02□□□□□ -0.33
NFIX-208ENST00000587260 PHC2Q8IXK0 858 aa13.02□□□□□ -0.33
NFIX-208ENST00000587260 YIPF7Q8N8F6 280 aa13.02□□□□□ -0.33
NFIX-208ENST00000587260 FGFBP3Q8TAT2 258 aa13.02□□□□□ -0.33
NFIX-208ENST00000587260 UFD1Q92890 307 aa13.02□□□□□ -0.33
NFIX-208ENST00000587260 FAM192AQ9GZU8 254 aa13.02□□□□□ -0.33
NFIX-208ENST00000587260 NDUFB11Q9NX14 153 aa13.02□□□□□ -0.33
NFIX-208ENST00000587260 ST6GALNAC2Q9UJ37 374 aa13.02□□□□□ -0.33
NFIX-208ENST00000587260 LRP12Q9Y561 859 aa13.02□□□□□ -0.33
NFIX-208ENST00000587260 CEPT1Q9Y6K0 416 aa13.02□□□□□ -0.33
NFIX-208ENST00000587260 FASNP49327 2511 aaKnown RBP13.01□□□□□ -0.33
NFIX-208ENST00000587260 C16orf97H3BN30 126 aa13.01□□□□□ -0.33
NFIX-208ENST00000587260 H3BSA7 217 aa13.01□□□□□ -0.33
NFIX-208ENST00000587260 SRSF10O75494 262 aaKnown RBP13.01□□□□□ -0.33
NFIX-208ENST00000587260 H2BFMP0C1H6 154 aa13.01□□□□□ -0.33
NFIX-208ENST00000587260 CD36P16671 472 aa13.01□□□□□ -0.33
NFIX-208ENST00000587260 ZNF32P17041 273 aa13.01□□□□□ -0.33
NFIX-208ENST00000587260 AGAP20933 346 aa13.01□□□□□ -0.33
NFIX-208ENST00000587260 GTF2A1P52655 376 aaPredicted RBP13.01□□□□□ -0.33
NFIX-208ENST00000587260 SRSF1Q07955 248 aaKnown RBP eCLIP13.01□□□□□ -0.33
NFIX-208ENST00000587260 ECH1Q13011 328 aa13.01□□□□□ -0.33
NFIX-208ENST00000587260 RAB35Q15286 201 aa13.01□□□□□ -0.33
NFIX-208ENST00000587260 FBXL19-AS1Q494R0 122 aa13.01□□□□□ -0.33
NFIX-208ENST00000587260 ELFN2Q5R3F8 820 aa13.01□□□□□ -0.33
NFIX-208ENST00000587260 ANKRD13BQ86YJ7 626 aa13.01□□□□□ -0.33
NFIX-208ENST00000587260 HIST2H2ABQ8IUE6 130 aaPredicted RBP13.01□□□□□ -0.33
NFIX-208ENST00000587260 NANOS1Q8WY41 292 aaKnown RBP13.01□□□□□ -0.33
NFIX-208ENST00000587260 RNASE6Q93091 150 aaKnown RBP13.01□□□□□ -0.33
NFIX-208ENST00000587260 FUNDC2Q9BWH2 189 aa13.01□□□□□ -0.33
NFIX-208ENST00000587260 OR2H1Q9GZK4 316 aa13.01□□□□□ -0.33
NFIX-208ENST00000587260 HDHD2Q9H0R4 259 aa13.01□□□□□ -0.33
NFIX-208ENST00000587260 NOX3Q9HBY0 568 aa13.01□□□□□ -0.33
NFIX-208ENST00000587260 SLC17A5Q9NRA2 495 aa13.01□□□□□ -0.33
NFIX-208ENST00000587260 CENPMQ9NSP4 180 aa13.01□□□□□ -0.33
NFIX-208ENST00000587260 B3GNT2Q9NY97 397 aa13.01□□□□□ -0.33
NFIX-208ENST00000587260 ATPIF1Q9UII2 106 aa13.01□□□□□ -0.33
NFIX-208ENST00000587260 SIRT4Q9Y6E7 314 aaPredicted RBP13.01□□□□□ -0.33
NFIX-208ENST00000587260 MYO18BQ8IUG5 2567 aa13.01□□□□□ -0.33
NFIX-208ENST00000587260 TENM4Q6N022 2769 aa13□□□□□ -0.33
NFIX-208ENST00000587260 ARPC4-TTLL3A0A0A6YYG9 625 aa13□□□□□ -0.33
NFIX-208ENST00000587260 OR5H1A6NKK0 313 aa13□□□□□ -0.33
NFIX-208ENST00000587260 ZNF701M0R085 212 aaPredicted RBP13□□□□□ -0.33
NFIX-208ENST00000587260 SGCEO43556 437 aa13□□□□□ -0.33
NFIX-208ENST00000587260 SYNGR3O43761 229 aa13□□□□□ -0.33
NFIX-208ENST00000587260 CELP19835 753 aa13□□□□□ -0.33
NFIX-208ENST00000587260 OTX1P32242 354 aaPredicted RBP13□□□□□ -0.33
NFIX-208ENST00000587260 ARR3P36575 388 aa13□□□□□ -0.33
NFIX-208ENST00000587260 MMP16P51512 607 aa13□□□□□ -0.33
NFIX-208ENST00000587260 CCR9P51686 369 aa13□□□□□ -0.33
NFIX-208ENST00000587260 GRB2P62993 217 aaKnown RBP13□□□□□ -0.33
NFIX-208ENST00000587260 PSG4Q00888 419 aa13□□□□□ -0.33
NFIX-208ENST00000587260 CDK5R1Q15078 307 aa13□□□□□ -0.33
NFIX-208ENST00000587260 C1QTNF12Q5T7M4 302 aa13□□□□□ -0.33
NFIX-208ENST00000587260 LIPKQ5VXJ0 399 aa13□□□□□ -0.33
NFIX-208ENST00000587260 SPATC1Q76KD6 591 aa13□□□□□ -0.33
NFIX-208ENST00000587260 C17orf78Q8N4C9 275 aa13□□□□□ -0.33
NFIX-208ENST00000587260 STEAP2Q8NFT2 490 aa13□□□□□ -0.33
NFIX-208ENST00000587260 ZNF420Q8TAQ5 688 aaPredicted RBP13□□□□□ -0.33
NFIX-208ENST00000587260 LRRC46Q96FV0 321 aa13□□□□□ -0.33
NFIX-208ENST00000587260 ATF6BQ99941 703 aa13□□□□□ -0.33
NFIX-208ENST00000587260 HDHD5Q9BXW7 423 aa13□□□□□ -0.33
NFIX-208ENST00000587260 RNF121Q9H920 327 aa13□□□□□ -0.33
NFIX-208ENST00000587260 SF3B6Q9Y3B4 125 aaKnown RBP13□□□□□ -0.33
NFIX-208ENST00000587260 FLNCQ14315 2725 aa13□□□□□ -0.33
NFIX-208ENST00000587260 OR6C6A6NF89 314 aa12.99□□□□□ -0.33
NFIX-208ENST00000587260 UBL3O95164 117 aa12.99□□□□□ -0.33
NFIX-208ENST00000587260 COX5BP10606 129 aa12.99□□□□□ -0.33
NFIX-208ENST00000587260 TMBIM6P55061 237 aa12.99□□□□□ -0.33
NFIX-208ENST00000587260 TFF3Q07654 80 aa12.99□□□□□ -0.33
NFIX-208ENST00000587260 ALKBH1Q13686 389 aaKnown RBP12.99□□□□□ -0.33
NFIX-208ENST00000587260 KRTAP27-1Q3LI81 207 aa12.99□□□□□ -0.33
NFIX-208ENST00000587260 GPR107Q5VW38 600 aa12.99□□□□□ -0.33
NFIX-208ENST00000587260 MDP1Q86V88 176 aa12.99□□□□□ -0.33
NFIX-208ENST00000587260 P2RY8Q86VZ1 359 aa12.99□□□□□ -0.33
NFIX-208ENST00000587260 WDR31Q8NA23 367 aa12.99□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms