RNA–Protein interactions for RNA: ENST00000586813.5

TRAF4-216, Transcript of TNF receptor associated factor 4, humanhuman

TSL 3

Gene TRAF4, Length 789 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-216ENST00000586813 IMPA2O14732 288 aa16.23■□□□□ 0.19
TRAF4-216ENST00000586813 SLC22A2O15244 555 aa16.23■□□□□ 0.19
TRAF4-216ENST00000586813 RER1O15258 196 aa16.23■□□□□ 0.19
TRAF4-216ENST00000586813 KHDRBS3O75525 346 aaKnown RBP16.23■□□□□ 0.19
TRAF4-216ENST00000586813 NDUFB2O95178 105 aa16.23■□□□□ 0.19
TRAF4-216ENST00000586813 SERPINA1P01009 418 aa16.23■□□□□ 0.19
TRAF4-216ENST00000586813 RNASE1P07998 156 aaKnown RBP16.23■□□□□ 0.19
TRAF4-216ENST00000586813 CD80P33681 288 aa16.23■□□□□ 0.19
TRAF4-216ENST00000586813 RGS6P49758 472 aa16.23■□□□□ 0.19
TRAF4-216ENST00000586813 PAX8Q06710 450 aa16.23■□□□□ 0.19
TRAF4-216ENST00000586813 GPR139Q6DWJ6 353 aa16.23■□□□□ 0.19
TRAF4-216ENST00000586813 SLC27A4Q6P1M0 643 aa16.23■□□□□ 0.19
TRAF4-216ENST00000586813 ADCK1Q86TW2 530 aa16.23■□□□□ 0.19
TRAF4-216ENST00000586813 ZNF420Q8TAQ5 688 aaPredicted RBP16.23■□□□□ 0.19
TRAF4-216ENST00000586813 MEGF10Q96KG7 1140 aa16.23■□□□□ 0.19
TRAF4-216ENST00000586813 GPX7Q96SL4 187 aaPredicted RBP16.23■□□□□ 0.19
TRAF4-216ENST00000586813 SSBP3Q9BWW4 388 aaPredicted RBP16.23■□□□□ 0.19
TRAF4-216ENST00000586813 MS4A7Q9GZW8 240 aaPredicted RBP16.23■□□□□ 0.19
TRAF4-216ENST00000586813 ZNF696Q9H7X3 374 aa16.23■□□□□ 0.19
TRAF4-216ENST00000586813 NRIP3Q9NQ35 241 aa16.23■□□□□ 0.19
TRAF4-216ENST00000586813 PTTG3PQ9NZH4 202 aa16.23■□□□□ 0.19
TRAF4-216ENST00000586813 VSX1Q9NZR4 365 aaPredicted RBP16.23■□□□□ 0.19
TRAF4-216ENST00000586813 IL20RAQ9UHF4 553 aa16.23■□□□□ 0.19
TRAF4-216ENST00000586813 NME4O00746 187 aa16.22■□□□□ 0.19
TRAF4-216ENST00000586813 SOCS2O14508 198 aa16.22■□□□□ 0.19
TRAF4-216ENST00000586813 GSTA4O15217 222 aa16.22■□□□□ 0.19
TRAF4-216ENST00000586813 KCNAB3O43448 404 aa16.22■□□□□ 0.19
TRAF4-216ENST00000586813 SASH3O75995 380 aa16.22■□□□□ 0.19
TRAF4-216ENST00000586813 WNT2P09544 360 aa16.22■□□□□ 0.19
TRAF4-216ENST00000586813 IGHV4-38-2P0DP08 117 aa16.22■□□□□ 0.19
TRAF4-216ENST00000586813 RPS2P15880 293 aaKnown RBP16.22■□□□□ 0.19
TRAF4-216ENST00000586813 PAX2Q02962 417 aa16.22■□□□□ 0.19
TRAF4-216ENST00000586813 OR2T2Q6IF00 324 aa16.22■□□□□ 0.19
TRAF4-216ENST00000586813 TSEN54Q7Z6J9 526 aaKnown RBP16.22■□□□□ 0.19
TRAF4-216ENST00000586813 CYP4Z1Q86W10 505 aa16.22■□□□□ 0.19
TRAF4-216ENST00000586813 PARP8Q8N3A8 854 aa16.22■□□□□ 0.19
TRAF4-216ENST00000586813 OR8G5Q8NG78 346 aa16.22■□□□□ 0.19
TRAF4-216ENST00000586813 OR5L1Q8NGL2 311 aa16.22■□□□□ 0.19
TRAF4-216ENST00000586813 OR13G1Q8NGZ3 307 aa16.22■□□□□ 0.19
TRAF4-216ENST00000586813 SLC25A28Q96A46 364 aa16.22■□□□□ 0.19
TRAF4-216ENST00000586813 APOBEC3DQ96AK3 386 aaPredicted RBP16.22■□□□□ 0.19
TRAF4-216ENST00000586813 NUAK2Q9H093 628 aa16.22■□□□□ 0.19
TRAF4-216ENST00000586813 ARGLU1Q9NWB6 273 aaPredicted RBP16.22■□□□□ 0.19
TRAF4-216ENST00000586813 POLR1DQ9Y2S0 133 aa16.22■□□□□ 0.19
TRAF4-216ENST00000586813 ENPP4Q9Y6X5 453 aa16.22■□□□□ 0.19
TRAF4-216ENST00000586813 CLDN34H7C241 214 aa16.21■□□□□ 0.19
TRAF4-216ENST00000586813 PTP4A3O75365 173 aa16.21■□□□□ 0.19
TRAF4-216ENST00000586813 ZNF205O95201 554 aa16.21■□□□□ 0.19
TRAF4-216ENST00000586813 CYB5R3P00387 301 aaPredicted RBP16.21■□□□□ 0.19
TRAF4-216ENST00000586813 PPIAL4GP0DN37 164 aa16.21■□□□□ 0.19
TRAF4-216ENST00000586813 H2AFXP16104 143 aaPredicted RBP16.21■□□□□ 0.19
TRAF4-216ENST00000586813 CPT2P23786 658 aa16.21■□□□□ 0.19
TRAF4-216ENST00000586813 SRP9P49458 86 aaKnown RBP16.21■□□□□ 0.19
TRAF4-216ENST00000586813 SLC7A2P52569 658 aa16.21■□□□□ 0.19
TRAF4-216ENST00000586813 KCNMB1Q16558 191 aa16.21■□□□□ 0.19
TRAF4-216ENST00000586813 BTNL3Q6UXE8 466 aa16.21■□□□□ 0.19
TRAF4-216ENST00000586813 PTCHD4Q6ZW05 846 aa16.21■□□□□ 0.19
TRAF4-216ENST00000586813 KLBQ86Z14 1044 aa16.21■□□□□ 0.19
TRAF4-216ENST00000586813 OR52E2Q8NGJ4 325 aa16.21■□□□□ 0.19
TRAF4-216ENST00000586813 RP9Q8TA86 221 aaKnown RBP16.21■□□□□ 0.19
TRAF4-216ENST00000586813 RSRC1Q96IZ7 334 aaKnown RBP16.21■□□□□ 0.19
TRAF4-216ENST00000586813 ZNF582Q96NG8 517 aaPredicted RBP16.21■□□□□ 0.19
TRAF4-216ENST00000586813 HDHD2Q9H0R4 259 aa16.21■□□□□ 0.19
TRAF4-216ENST00000586813 TMEM165Q9HC07 324 aa16.21■□□□□ 0.19
TRAF4-216ENST00000586813 IGHV3OR16-10A0A075B7F0 116 aa16.2■□□□□ 0.18
TRAF4-216ENST00000586813 IGHV2-70DA0A0C4DH43 119 aa16.2■□□□□ 0.18
TRAF4-216ENST00000586813 A0A1W2PRQ8 180 aa16.2■□□□□ 0.18
TRAF4-216ENST00000586813 H0YL77 283 aa16.2■□□□□ 0.18
TRAF4-216ENST00000586813 MLNRO43193 412 aa16.2■□□□□ 0.18
TRAF4-216ENST00000586813 H1F0P07305 194 aaKnown RBP16.2■□□□□ 0.18
TRAF4-216ENST00000586813 OMPP47874 163 aa16.2■□□□□ 0.18
TRAF4-216ENST00000586813 GSK3BP49841 420 aa16.2■□□□□ 0.18
TRAF4-216ENST00000586813 FXYD6P3P58550 94 aa16.2■□□□□ 0.18
TRAF4-216ENST00000586813 GNB2P62879 340 aa16.2■□□□□ 0.18
TRAF4-216ENST00000586813 DGCR6Q14129 220 aa16.2■□□□□ 0.18
TRAF4-216ENST00000586813 SLC9A3R2Q15599 337 aa16.2■□□□□ 0.18
TRAF4-216ENST00000586813 FGD3Q5JSP0 725 aa16.2■□□□□ 0.18
TRAF4-216ENST00000586813 LRRN1Q6UXK5 716 aa16.2■□□□□ 0.18
TRAF4-216ENST00000586813 C9orf139Q6ZV77 190 aa16.2■□□□□ 0.18
TRAF4-216ENST00000586813 BHLHE23Q8NDY6 225 aa16.2■□□□□ 0.18
TRAF4-216ENST00000586813 DACT3Q96B18 629 aaPredicted RBP16.2■□□□□ 0.18
TRAF4-216ENST00000586813 UPRTQ96BW1 309 aa16.2■□□□□ 0.18
TRAF4-216ENST00000586813 COQ7Q99807 217 aa16.2■□□□□ 0.18
TRAF4-216ENST00000586813 SLC30A2Q9BRI3 323 aa16.2■□□□□ 0.18
TRAF4-216ENST00000586813 UNKLQ9H9P5 680 aaKnown RBP16.2■□□□□ 0.18
TRAF4-216ENST00000586813 MIOXQ9UGB7 285 aa16.2■□□□□ 0.18
TRAF4-216ENST00000586813 IER3IP1Q9Y5U9 82 aa16.2■□□□□ 0.18
TRAF4-216ENST00000586813 LHFPL6Q9Y693 200 aa16.2■□□□□ 0.18
TRAF4-216ENST00000586813 TRAV40A0A0B4J280 105 aa16.19■□□□□ 0.18
TRAF4-216ENST00000586813 IGHV3-64DA0A0J9YX35 117 aa16.19■□□□□ 0.18
TRAF4-216ENST00000586813 IQCF6A8MYZ5 107 aa16.19■□□□□ 0.18
TRAF4-216ENST00000586813 F5H5P2 479 aa16.19■□□□□ 0.18
TRAF4-216ENST00000586813 GPANK1O95872 356 aa16.19■□□□□ 0.18
TRAF4-216ENST00000586813 PLATP00750 562 aa16.19■□□□□ 0.18
TRAF4-216ENST00000586813 MTNR1AP48039 350 aa16.19■□□□□ 0.18
TRAF4-216ENST00000586813 HIST1H3AP68431 136 aa16.19■□□□□ 0.18
TRAF4-216ENST00000586813 IL13RA1P78552 427 aa16.19■□□□□ 0.18
TRAF4-216ENST00000586813 MEP1BQ16820 701 aa16.19■□□□□ 0.18
TRAF4-216ENST00000586813 ZNF181Q2M3W8 571 aa16.19■□□□□ 0.18
TRAF4-216ENST00000586813 HIST2H3PS2Q5TEC6 136 aa16.19■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 74.6 ms