RNA–Protein interactions for RNA: ENST00000584083.5

SS18-224, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 4

Gene SS18, Length 663 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-224ENST00000584083 HIST2H3AQ71DI3 136 aa17.39■□□□□ 0.37
SS18-224ENST00000584083 SPATA24Q86W54 205 aa17.39■□□□□ 0.37
SS18-224ENST00000584083 LINC00346Q8IVM7 164 aa17.39■□□□□ 0.37
SS18-224ENST00000584083 PROKR2Q8NFJ6 384 aa17.39■□□□□ 0.37
SS18-224ENST00000584083 OR10G2Q8NGC3 310 aa17.39■□□□□ 0.37
SS18-224ENST00000584083 CANT1Q8WVQ1 401 aa17.39■□□□□ 0.37
SS18-224ENST00000584083 COG8Q96MW5 612 aa17.39■□□□□ 0.37
SS18-224ENST00000584083 DCLRE1CQ96SD1 692 aaKnown RBP17.39■□□□□ 0.37
SS18-224ENST00000584083 PITX2Q99697 317 aa17.39■□□□□ 0.37
SS18-224ENST00000584083 DGCR6LQ9BY27 220 aa17.39■□□□□ 0.37
SS18-224ENST00000584083 EGLN1Q9GZT9 426 aa17.39■□□□□ 0.37
SS18-224ENST00000584083 SHARPINQ9H0F6 387 aa17.39■□□□□ 0.37
SS18-224ENST00000584083 MSL2Q9HCI7 577 aa17.39■□□□□ 0.37
SS18-224ENST00000584083 TMEM160Q9NX00 188 aa17.39■□□□□ 0.37
SS18-224ENST00000584083 ATPIF1Q9UII2 106 aa17.39■□□□□ 0.37
SS18-224ENST00000584083 KIAA1324LA8MWY0 1029 aaPredicted RBP17.38■□□□□ 0.37
SS18-224ENST00000584083 ZNF823P16415 610 aa17.38■□□□□ 0.37
SS18-224ENST00000584083 FLOT2Q14254 428 aa17.38■□□□□ 0.37
SS18-224ENST00000584083 LNX2Q8N448 690 aa17.38■□□□□ 0.37
SS18-224ENST00000584083 OR5L1Q8NGL2 311 aa17.38■□□□□ 0.37
SS18-224ENST00000584083 OR2T4Q8NH00 348 aa17.38■□□□□ 0.37
SS18-224ENST00000584083 GIPC3Q8TF64 312 aa17.38■□□□□ 0.37
SS18-224ENST00000584083 SLC7A6OSQ96CW6 309 aaPredicted RBP17.38■□□□□ 0.37
SS18-224ENST00000584083 CMBLQ96DG6 245 aa17.38■□□□□ 0.37
SS18-224ENST00000584083 COQ7Q99807 217 aa17.38■□□□□ 0.37
SS18-224ENST00000584083 ARMC1Q9NVT9 282 aa17.38■□□□□ 0.37
SS18-224ENST00000584083 LPAR3Q9UBY5 353 aa17.38■□□□□ 0.37
SS18-224ENST00000584083 PURGQ9UJV8 347 aaKnown RBP17.38■□□□□ 0.37
SS18-224ENST00000584083 ZDHHC8Q9ULC8 765 aa17.38■□□□□ 0.37
SS18-224ENST00000584083 BAIAP2Q9UQB8 552 aa17.38■□□□□ 0.37
SS18-224ENST00000584083 ANK3Q12955 4377 aaKnown RBP17.38■□□□□ 0.37
SS18-224ENST00000584083 DNAJC8O75937 253 aaPredicted RBP17.37■□□□□ 0.37
SS18-224ENST00000584083 RGS6P49758 472 aa17.37■□□□□ 0.37
SS18-224ENST00000584083 GK3PQ14409 553 aa17.37■□□□□ 0.37
SS18-224ENST00000584083 HFEQ30201 348 aa17.37■□□□□ 0.37
SS18-224ENST00000584083 SLC18B1Q6NT16 456 aa17.37■□□□□ 0.37
SS18-224ENST00000584083 CFAP77Q6ZQR2 320 aa17.37■□□□□ 0.37
SS18-224ENST00000584083 LINC01356Q8N9X3 169 aa17.37■□□□□ 0.37
SS18-224ENST00000584083 SLC37A3Q8NCC5 494 aa17.37■□□□□ 0.37
SS18-224ENST00000584083 OR2T33Q8NG76 320 aa17.37■□□□□ 0.37
SS18-224ENST00000584083 OR4Q3Q8NH05 313 aa17.37■□□□□ 0.37
SS18-224ENST00000584083 CLDND2Q8NHS1 167 aa17.37■□□□□ 0.37
SS18-224ENST00000584083 PTP4A1Q93096 173 aa17.37■□□□□ 0.37
SS18-224ENST00000584083 ELMOD3Q96FG2 381 aa17.37■□□□□ 0.37
SS18-224ENST00000584083 DIRC2Q96SL1 478 aa17.37■□□□□ 0.37
SS18-224ENST00000584083 DDOQ99489 341 aa17.37■□□□□ 0.37
SS18-224ENST00000584083 FEVQ99581 238 aa17.37■□□□□ 0.37
SS18-224ENST00000584083 PTTG3PQ9NZH4 202 aa17.37■□□□□ 0.37
SS18-224ENST00000584083 KLHL21Q9UJP4 597 aa17.37■□□□□ 0.37
SS18-224ENST00000584083 IFNA2P01563 188 aa17.36■□□□□ 0.37
SS18-224ENST00000584083 HOXB6P17509 224 aaKnown RBP17.36■□□□□ 0.37
SS18-224ENST00000584083 IGFBP5P24593 272 aa17.36■□□□□ 0.37
SS18-224ENST00000584083 GGT2P36268 569 aa17.36■□□□□ 0.37
SS18-224ENST00000584083 MVKQ03426 396 aa17.36■□□□□ 0.37
SS18-224ENST00000584083 ZNF362Q5T0B9 420 aaPredicted RBP17.36■□□□□ 0.37
SS18-224ENST00000584083 AVPI1Q5T686 147 aa17.36■□□□□ 0.37
SS18-224ENST00000584083 OR51L1Q8NGJ5 315 aa17.36■□□□□ 0.37
SS18-224ENST00000584083 OR9Q1Q8NGQ5 310 aa17.36■□□□□ 0.37
SS18-224ENST00000584083 APOBEC3DQ96AK3 386 aaPredicted RBP17.36■□□□□ 0.37
SS18-224ENST00000584083 HAVCR1Q96D42 359 aa17.36■□□□□ 0.37
SS18-224ENST00000584083 NIPSNAP1Q9BPW8 284 aa17.36■□□□□ 0.37
SS18-224ENST00000584083 MRPL22Q9NWU5 206 aaKnown RBP17.36■□□□□ 0.37
SS18-224ENST00000584083 TREM2Q9NZC2 230 aa17.36■□□□□ 0.37
SS18-224ENST00000584083 CYB5R1Q9UHQ9 305 aa17.36■□□□□ 0.37
SS18-224ENST00000584083 KCNG2Q9UJ96 466 aa17.36■□□□□ 0.37
SS18-224ENST00000584083 CACNG2Q9Y698 323 aa17.36■□□□□ 0.37
SS18-224ENST00000584083 TVP23AA6NH52 213 aa17.35■□□□□ 0.37
SS18-224ENST00000584083 CLDN25C9JDP6 229 aa17.35■□□□□ 0.37
SS18-224ENST00000584083 F5H5K5 113 aa17.35■□□□□ 0.37
SS18-224ENST00000584083 H3BN98 237 aa17.35■□□□□ 0.37
SS18-224ENST00000584083 J3QW42 95 aa17.35■□□□□ 0.37
SS18-224ENST00000584083 WNT9BO14905 357 aa17.35■□□□□ 0.37
SS18-224ENST00000584083 E2F6O75461 281 aa17.35■□□□□ 0.37
SS18-224ENST00000584083 IFNGP01579 166 aa17.35■□□□□ 0.37
SS18-224ENST00000584083 ADH4P08319 380 aa17.35■□□□□ 0.37
SS18-224ENST00000584083 FAM157CP0CG43 387 aa17.35■□□□□ 0.37
SS18-224ENST00000584083 KITLGP21583 273 aa17.35■□□□□ 0.37
SS18-224ENST00000584083 CDH15P55291 814 aa17.35■□□□□ 0.37
SS18-224ENST00000584083 TNFAIP6P98066 277 aaPredicted RBP17.35■□□□□ 0.37
SS18-224ENST00000584083 ECH1Q13011 328 aa17.35■□□□□ 0.37
SS18-224ENST00000584083 CRMP1Q14194 572 aa17.35■□□□□ 0.37
SS18-224ENST00000584083 OR2Z1Q8NG97 314 aa17.35■□□□□ 0.37
SS18-224ENST00000584083 TEX47Q8TBZ9 253 aa17.35■□□□□ 0.37
SS18-224ENST00000584083 CCL17Q92583 94 aa17.35■□□□□ 0.37
SS18-224ENST00000584083 TIMD4Q96H15 378 aa17.35■□□□□ 0.37
SS18-224ENST00000584083 ATF6BQ99941 703 aa17.35■□□□□ 0.37
SS18-224ENST00000584083 YY1AP1Q9H869 796 aa17.35■□□□□ 0.37
SS18-224ENST00000584083 PDP1Q9P0J1 537 aaPredicted RBP17.35■□□□□ 0.37
SS18-224ENST00000584083 POMPQ9Y244 141 aa17.35■□□□□ 0.37
SS18-224ENST00000584083 TANC2Q9HCD6 1990 aa17.35■□□□□ 0.37
SS18-224ENST00000584083 DYSFO75923 2080 aa17.35■□□□□ 0.37
SS18-224ENST00000584083 RIIAD1A6NNX1 92 aa17.34■□□□□ 0.37
SS18-224ENST00000584083 RAC2P15153 192 aa17.34■□□□□ 0.37
SS18-224ENST00000584083 HNF1AP20823 631 aa17.34■□□□□ 0.37
SS18-224ENST00000584083 TNFSF4P23510 183 aa17.34■□□□□ 0.37
SS18-224ENST00000584083 ERFP50548 548 aa17.34■□□□□ 0.37
SS18-224ENST00000584083 CDK5R2Q13319 367 aa17.34■□□□□ 0.37
SS18-224ENST00000584083 HLXQ14774 488 aaPredicted RBP17.34■□□□□ 0.37
SS18-224ENST00000584083 FAM120AOSQ5T036 256 aa17.34■□□□□ 0.37
SS18-224ENST00000584083 CD300LDQ6UXZ3 194 aa17.34■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 44.8 ms