RNA–Protein interactions for RNA: ENST00000584063.5

CDK5RAP3-231, Transcript of CDK5 regulatory subunit associated protein 3, human

TSL 1 (best)

Gene CDK5RAP3, Length 2,759 nt, Biotype retained intron.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CDK5RAP3-231	ENST00000584063	WBP2NL	Q6ICG8	309 aa		10.46	□□□□□ -0.74
CDK5RAP3-231	ENST00000584063	H1FNT	Q75WM6	255 aa	Predicted RBP	10.46	□□□□□ -0.74
CDK5RAP3-231	ENST00000584063	SPEM1	Q8N4L4	309 aa		10.46	□□□□□ -0.74
CDK5RAP3-231	ENST00000584063	OR11G2	Q8NGC1	345 aa		10.46	□□□□□ -0.74
CDK5RAP3-231	ENST00000584063	BRIX1	Q8TDN6	353 aa	Known RBP	10.46	□□□□□ -0.74
CDK5RAP3-231	ENST00000584063	NXPE2	Q96DL1	559 aa		10.46	□□□□□ -0.74
CDK5RAP3-231	ENST00000584063	ELMOD3	Q96FG2	381 aa		10.46	□□□□□ -0.74
CDK5RAP3-231	ENST00000584063	BIN3	Q9NQY0	253 aa		10.46	□□□□□ -0.74
CDK5RAP3-231	ENST00000584063	ST6GALNAC2	Q9UJ37	374 aa		10.46	□□□□□ -0.74
CDK5RAP3-231	ENST00000584063	EP300	Q09472	2414 aa	Predicted RBP	10.46	□□□□□ -0.74
CDK5RAP3-231	ENST00000584063		A0A0A6YYC8	382 aa	Predicted RBP	10.45	□□□□□ -0.74
CDK5RAP3-231	ENST00000584063	KIR2DS5	A0A0G2JLQ3	304 aa		10.45	□□□□□ -0.74
CDK5RAP3-231	ENST00000584063		A0A0G2JNG1	304 aa		10.45	□□□□□ -0.74
CDK5RAP3-231	ENST00000584063	C7orf66	A4D0T2	115 aa		10.45	□□□□□ -0.74
CDK5RAP3-231	ENST00000584063	TVP23A	A6NH52	213 aa		10.45	□□□□□ -0.74
CDK5RAP3-231	ENST00000584063		I3L1I5	382 aa	Predicted RBP	10.45	□□□□□ -0.74
CDK5RAP3-231	ENST00000584063	KIR2DS3	K7RE56	304 aa		10.45	□□□□□ -0.74
CDK5RAP3-231	ENST00000584063	CYR61	O00622	381 aa		10.45	□□□□□ -0.74
CDK5RAP3-231	ENST00000584063	PIN1P1	O15428	100 aa		10.45	□□□□□ -0.74
CDK5RAP3-231	ENST00000584063	RCBTB2	O95199	551 aa		10.45	□□□□□ -0.74
CDK5RAP3-231	ENST00000584063	CBX7	O95931	251 aa		10.45	□□□□□ -0.74
CDK5RAP3-231	ENST00000584063	MAS1	P04201	325 aa		10.45	□□□□□ -0.74
CDK5RAP3-231	ENST00000584063	LINC00614	P0C842	121 aa		10.45	□□□□□ -0.74
CDK5RAP3-231	ENST00000584063	APOBEC3A	P31941	199 aa	Predicted RBP	10.45	□□□□□ -0.74
CDK5RAP3-231	ENST00000584063	NANOS3	P60323	173 aa	Known RBP	10.45	□□□□□ -0.74
CDK5RAP3-231	ENST00000584063	MRPS11	P82912	194 aa	Known RBP	10.45	□□□□□ -0.74
CDK5RAP3-231	ENST00000584063	KIR2DS5	Q14953	304 aa		10.45	□□□□□ -0.74
CDK5RAP3-231	ENST00000584063	PLEKHN1	Q494U1	663 aa	Predicted RBP	10.45	□□□□□ -0.74
CDK5RAP3-231	ENST00000584063	LBH	Q53QV2	105 aa	Predicted RBP	10.45	□□□□□ -0.74
CDK5RAP3-231	ENST00000584063	DMKN	Q6E0U4	476 aa	Predicted RBP	10.45	□□□□□ -0.74
CDK5RAP3-231	ENST00000584063	TMEM17	Q86X19	198 aa		10.45	□□□□□ -0.74
CDK5RAP3-231	ENST00000584063	NT5C	Q8TCD5	201 aa		10.45	□□□□□ -0.74
CDK5RAP3-231	ENST00000584063	CXorf58	Q96LI9	332 aa		10.45	□□□□□ -0.74
CDK5RAP3-231	ENST00000584063	UBL7	Q96S82	380 aa	Predicted RBP	10.45	□□□□□ -0.74
CDK5RAP3-231	ENST00000584063	GFI1	Q99684	422 aa		10.45	□□□□□ -0.74
CDK5RAP3-231	ENST00000584063	MED17	Q9NVC6	651 aa		10.45	□□□□□ -0.74
CDK5RAP3-231	ENST00000584063	SLC35A3	Q9Y2D2	325 aa		10.45	□□□□□ -0.74
CDK5RAP3-231	ENST00000584063	FREM2	Q5SZK8	3169 aa		10.45	□□□□□ -0.74
CDK5RAP3-231	ENST00000584063	TCRBV16S1A1N1	A0A5B0	115 aa		10.45	□□□□□ -0.74
CDK5RAP3-231	ENST00000584063		M0R233	179 aa		10.45	□□□□□ -0.74
CDK5RAP3-231	ENST00000584063	IGLV3-19	P01714	112 aa		10.45	□□□□□ -0.74
CDK5RAP3-231	ENST00000584063	NID1	P14543	1247 aa		10.45	□□□□□ -0.74
CDK5RAP3-231	ENST00000584063	GFER	P55789	205 aa		10.45	□□□□□ -0.74
CDK5RAP3-231	ENST00000584063	SIRPA	P78324	504 aa		10.45	□□□□□ -0.74
CDK5RAP3-231	ENST00000584063	BTG2	P78543	158 aa		10.45	□□□□□ -0.74
CDK5RAP3-231	ENST00000584063	MPPED2	Q15777	294 aa		10.45	□□□□□ -0.74
CDK5RAP3-231	ENST00000584063	PRAMEF8	Q5VWM4	474 aa		10.45	□□□□□ -0.74
CDK5RAP3-231	ENST00000584063	PRAMEF7	Q5VXH5	474 aa		10.45	□□□□□ -0.74
CDK5RAP3-231	ENST00000584063	NCR3LG1	Q68D85	454 aa		10.45	□□□□□ -0.74
CDK5RAP3-231	ENST00000584063	ZNF573	Q86YE8	665 aa		10.45	□□□□□ -0.74
CDK5RAP3-231	ENST00000584063	CSNK1A1L	Q8N752	337 aa		10.45	□□□□□ -0.74
CDK5RAP3-231	ENST00000584063	BOLL	Q8N9W6	283 aa	Known RBP	10.45	□□□□□ -0.74
CDK5RAP3-231	ENST00000584063	ANKRD9	Q96BM1	317 aa	Predicted RBP	10.45	□□□□□ -0.74
CDK5RAP3-231	ENST00000584063	SPSB2	Q99619	263 aa		10.45	□□□□□ -0.74
CDK5RAP3-231	ENST00000584063	TPPP3	Q9BW30	176 aa		10.45	□□□□□ -0.74
CDK5RAP3-231	ENST00000584063	MS4A5	Q9H3V2	200 aa		10.45	□□□□□ -0.74
CDK5RAP3-231	ENST00000584063	HRASLS	Q9HDD0	168 aa		10.45	□□□□□ -0.74
CDK5RAP3-231	ENST00000584063	KCNG2	Q9UJ96	466 aa		10.45	□□□□□ -0.74
CDK5RAP3-231	ENST00000584063	FBLL1	A6NHQ2	334 aa	Known RBP	10.44	□□□□□ -0.74
CDK5RAP3-231	ENST00000584063		G3V3Q6	166 aa		10.44	□□□□□ -0.74
CDK5RAP3-231	ENST00000584063	UBL3	O95164	117 aa		10.44	□□□□□ -0.74
CDK5RAP3-231	ENST00000584063	MUC1	P15941	1255 aa	Predicted RBP	10.44	□□□□□ -0.74
CDK5RAP3-231	ENST00000584063	ID1	P41134	155 aa		10.44	□□□□□ -0.74
CDK5RAP3-231	ENST00000584063	RPS11	P62280	158 aa	Known RBP eCLIP	10.44	□□□□□ -0.74
CDK5RAP3-231	ENST00000584063	C2orf68	Q2NKX9	166 aa		10.44	□□□□□ -0.74
CDK5RAP3-231	ENST00000584063	HSD17B12	Q53GQ0	312 aa		10.44	□□□□□ -0.74
CDK5RAP3-231	ENST00000584063	CDPF1	Q6NVV7	123 aa		10.44	□□□□□ -0.74
CDK5RAP3-231	ENST00000584063	KCTD9	Q7L273	389 aa		10.44	□□□□□ -0.74
CDK5RAP3-231	ENST00000584063	GJD3	Q8N144	294 aa		10.44	□□□□□ -0.74
CDK5RAP3-231	ENST00000584063	CA13	Q8N1Q1	262 aa		10.44	□□□□□ -0.74
CDK5RAP3-231	ENST00000584063	OR10AC1	Q8NH08	325 aa		10.44	□□□□□ -0.74
CDK5RAP3-231	ENST00000584063	OR8S1	Q8NH09	359 aa		10.44	□□□□□ -0.74
CDK5RAP3-231	ENST00000584063	MAFA	Q8NHW3	353 aa	Predicted RBP	10.44	□□□□□ -0.74
CDK5RAP3-231	ENST00000584063	SORCS2	Q96PQ0	1159 aa		10.44	□□□□□ -0.74
CDK5RAP3-231	ENST00000584063	MICU1	Q9BPX6	476 aa		10.44	□□□□□ -0.74
CDK5RAP3-231	ENST00000584063	ZNF436	Q9C0F3	470 aa	Predicted RBP	10.44	□□□□□ -0.74
CDK5RAP3-231	ENST00000584063	TMEM27	Q9HBJ8	222 aa		10.44	□□□□□ -0.74
CDK5RAP3-231	ENST00000584063	EMC7	Q9NPA0	242 aa		10.44	□□□□□ -0.74
CDK5RAP3-231	ENST00000584063	MMP25	Q9NPA2	562 aa		10.44	□□□□□ -0.74
CDK5RAP3-231	ENST00000584063	ANKRD10	Q9NXR5	420 aa		10.44	□□□□□ -0.74
CDK5RAP3-231	ENST00000584063	RPS6KB2	Q9UBS0	482 aa		10.44	□□□□□ -0.74
CDK5RAP3-231	ENST00000584063	TCFL5	Q9UL49	500 aa		10.44	□□□□□ -0.74
CDK5RAP3-231	ENST00000584063	MOK	Q9UQ07	419 aa		10.44	□□□□□ -0.74
CDK5RAP3-231	ENST00000584063	MED12	Q93074	2177 aa		10.44	□□□□□ -0.74
CDK5RAP3-231	ENST00000584063		A0A1W2PPC1	479 aa		10.44	□□□□□ -0.74
CDK5RAP3-231	ENST00000584063	RPS10-NUDT3	A0A1W2PQS6	291 aa		10.44	□□□□□ -0.74
CDK5RAP3-231	ENST00000584063	SCGB2A1	O75556	95 aa		10.44	□□□□□ -0.74
CDK5RAP3-231	ENST00000584063	RLN1	P04808	185 aa		10.44	□□□□□ -0.74
CDK5RAP3-231	ENST00000584063	F13B	P05160	661 aa		10.44	□□□□□ -0.74
CDK5RAP3-231	ENST00000584063	OR2T7	P0C7T2	308 aa		10.44	□□□□□ -0.74
CDK5RAP3-231	ENST00000584063	CCL2	P13500	99 aa		10.44	□□□□□ -0.74
CDK5RAP3-231	ENST00000584063	FHIT	P49789	147 aa		10.44	□□□□□ -0.74
CDK5RAP3-231	ENST00000584063	NRG3	P56975	720 aa		10.44	□□□□□ -0.74
CDK5RAP3-231	ENST00000584063	STX4	Q12846	297 aa		10.44	□□□□□ -0.74
CDK5RAP3-231	ENST00000584063	FHL1	Q13642	323 aa		10.44	□□□□□ -0.74
CDK5RAP3-231	ENST00000584063	LINC00303	Q3SY05	128 aa		10.44	□□□□□ -0.74
CDK5RAP3-231	ENST00000584063	SLC35F2	Q8IXU6	374 aa		10.44	□□□□□ -0.74
CDK5RAP3-231	ENST00000584063	CLRN3	Q8NCR9	226 aa		10.44	□□□□□ -0.74
CDK5RAP3-231	ENST00000584063	TSEN15	Q8WW01	171 aa	Known RBP	10.44	□□□□□ -0.74
CDK5RAP3-231	ENST00000584063	GINS4	Q9BRT9	223 aa		10.44	□□□□□ -0.74

Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms