RNA–Protein interactions for RNA: ENST00000583976.1

SKA2-209, Transcript of spindle and kinetochore associated complex subunit 2, humanhuman

TSL 2

Gene SKA2, Length 570 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA2-209ENST00000583976 UGT2A3Q6UWM9 527 aa13.37□□□□□ -0.27
SKA2-209ENST00000583976 SLC16A14Q7RTX9 510 aa13.37□□□□□ -0.27
SKA2-209ENST00000583976 PARP8Q8N3A8 854 aa13.37□□□□□ -0.27
SKA2-209ENST00000583976 CBR4Q8N4T8 237 aa13.37□□□□□ -0.27
SKA2-209ENST00000583976 OR9Q1Q8NGQ5 310 aa13.37□□□□□ -0.27
SKA2-209ENST00000583976 GTF3AQ92664 365 aaKnown RBP13.37□□□□□ -0.27
SKA2-209ENST00000583976 NABP1Q96AH0 204 aa13.37□□□□□ -0.27
SKA2-209ENST00000583976 TMEM186Q96B77 213 aa13.37□□□□□ -0.27
SKA2-209ENST00000583976 DDOQ99489 341 aa13.37□□□□□ -0.27
SKA2-209ENST00000583976 RACGAP1Q9H0H5 632 aa13.37□□□□□ -0.27
SKA2-209ENST00000583976 KCNN2Q9H2S1 579 aa13.37□□□□□ -0.27
SKA2-209ENST00000583976 SIAEQ9HAT2 523 aa13.37□□□□□ -0.27
SKA2-209ENST00000583976 EMC7Q9NPA0 242 aa13.37□□□□□ -0.27
SKA2-209ENST00000583976 HIF1ANQ9NWT6 349 aa13.37□□□□□ -0.27
SKA2-209ENST00000583976 FAM183AA6NL82 134 aa13.36□□□□□ -0.27
SKA2-209ENST00000583976 UBL3O95164 117 aa13.36□□□□□ -0.27
SKA2-209ENST00000583976 CLPTM1O96005 669 aa13.36□□□□□ -0.27
SKA2-209ENST00000583976 GAAP10253 952 aa13.36□□□□□ -0.27
SKA2-209ENST00000583976 CLUP10909 449 aa13.36□□□□□ -0.27
SKA2-209ENST00000583976 ACHEP22303 614 aa13.36□□□□□ -0.27
SKA2-209ENST00000583976 PYCR1P32322 319 aa13.36□□□□□ -0.27
SKA2-209ENST00000583976 ESRRGP62508 458 aa13.36□□□□□ -0.27
SKA2-209ENST00000583976 GALK2Q01415 458 aa13.36□□□□□ -0.27
SKA2-209ENST00000583976 ZBTB49Q6ZSB9 765 aa13.36□□□□□ -0.27
SKA2-209ENST00000583976 GLB1L2Q8IW92 636 aa13.36□□□□□ -0.27
SKA2-209ENST00000583976 OR51L1Q8NGJ5 315 aa13.36□□□□□ -0.27
SKA2-209ENST00000583976 EME1Q96AY2 570 aa13.36□□□□□ -0.27
SKA2-209ENST00000583976 SLC29A1Q99808 456 aa13.36□□□□□ -0.27
SKA2-209ENST00000583976 C9orf16Q9BUW7 83 aa13.36□□□□□ -0.27
SKA2-209ENST00000583976 RIBC2Q9H4K1 309 aa13.36□□□□□ -0.27
SKA2-209ENST00000583976 MED20Q9H944 212 aa13.36□□□□□ -0.27
SKA2-209ENST00000583976 POLE4Q9NR33 117 aa13.36□□□□□ -0.27
SKA2-209ENST00000583976 CMC2Q9NRP2 79 aa13.36□□□□□ -0.27
SKA2-209ENST00000583976 TVP23BQ9NYZ1 205 aa13.36□□□□□ -0.27
SKA2-209ENST00000583976 DUSP13Q9UII6 198 aa13.36□□□□□ -0.27
SKA2-209ENST00000583976 IGLV1-36A0A0B4J1U3 117 aa13.35□□□□□ -0.27
SKA2-209ENST00000583976 SURF4O15260 269 aa13.35□□□□□ -0.27
SKA2-209ENST00000583976 PPIHO43447 177 aaKnown RBP13.35□□□□□ -0.27
SKA2-209ENST00000583976 CDC14BO60729 498 aa13.35□□□□□ -0.27
SKA2-209ENST00000583976 HLA-DQA2P01906 255 aa13.35□□□□□ -0.27
SKA2-209ENST00000583976 HMGN1P05114 100 aa13.35□□□□□ -0.27
SKA2-209ENST00000583976 ALPLP05186 524 aa13.35□□□□□ -0.27
SKA2-209ENST00000583976 GYPBP06028 91 aa13.35□□□□□ -0.27
SKA2-209ENST00000583976 ZNF3P17036 446 aa13.35□□□□□ -0.27
SKA2-209ENST00000583976 MSR1P21757 451 aa13.35□□□□□ -0.27
SKA2-209ENST00000583976 CFPP27918 469 aa13.35□□□□□ -0.27
SKA2-209ENST00000583976 EVX1P49640 407 aa13.35□□□□□ -0.27
SKA2-209ENST00000583976 RPS23P62266 143 aaKnown RBP13.35□□□□□ -0.27
SKA2-209ENST00000583976 GLO1Q04760 184 aa13.35□□□□□ -0.27
SKA2-209ENST00000583976 HNRNPA0Q13151 305 aaKnown RBP13.35□□□□□ -0.27
SKA2-209ENST00000583976 MEP1BQ16820 701 aa13.35□□□□□ -0.27
SKA2-209ENST00000583976 LRRC36Q1X8D7 754 aa13.35□□□□□ -0.27
SKA2-209ENST00000583976 ZIK1Q3SY52 487 aaPredicted RBP13.35□□□□□ -0.27
SKA2-209ENST00000583976 SLC36A2Q495M3 483 aa13.35□□□□□ -0.27
SKA2-209ENST00000583976 NRN1LQ496H8 165 aa13.35□□□□□ -0.27
SKA2-209ENST00000583976 AVPI1Q5T686 147 aa13.35□□□□□ -0.27
SKA2-209ENST00000583976 FAM27BQ5VT28 67 aa13.35□□□□□ -0.27
SKA2-209ENST00000583976 FOXL2NBQ6ZUU3 175 aa13.35□□□□□ -0.27
SKA2-209ENST00000583976 PROKR2Q8NFJ6 384 aa13.35□□□□□ -0.27
SKA2-209ENST00000583976 ZNRF4Q8WWF5 429 aa13.35□□□□□ -0.27
SKA2-209ENST00000583976 C11orf40Q8WZ69 217 aa13.35□□□□□ -0.27
SKA2-209ENST00000583976 RDH5Q92781 318 aa13.35□□□□□ -0.27
SKA2-209ENST00000583976 PLEKHA8Q96JA3 519 aa13.35□□□□□ -0.27
SKA2-209ENST00000583976 TEX12Q9BXU0 123 aa13.35□□□□□ -0.27
SKA2-209ENST00000583976 SLC25A19Q9HC21 320 aa13.35□□□□□ -0.27
SKA2-209ENST00000583976 CCNB1IP1Q9NPC3 277 aa13.35□□□□□ -0.27
SKA2-209ENST00000583976 SPEF1Q9Y4P9 236 aa13.35□□□□□ -0.27
SKA2-209ENST00000583976 H0YHG0 523 aa13.34□□□□□ -0.27
SKA2-209ENST00000583976 ZNF32P17041 273 aa13.34□□□□□ -0.27
SKA2-209ENST00000583976 ALDH3A2P51648 485 aa13.34□□□□□ -0.27
SKA2-209ENST00000583976 ENDOGQ14249 297 aaKnown RBP13.34□□□□□ -0.27
SKA2-209ENST00000583976 SNAPC1Q16533 368 aa13.34□□□□□ -0.27
SKA2-209ENST00000583976 NKPD1Q17RQ9 610 aa13.34□□□□□ -0.27
SKA2-209ENST00000583976 LPCAT4Q643R3 524 aa13.34□□□□□ -0.27
SKA2-209ENST00000583976 TMEM53Q6P2H8 277 aa13.34□□□□□ -0.27
SKA2-209ENST00000583976 C12orf54Q6X4T0 127 aa13.34□□□□□ -0.27
SKA2-209ENST00000583976 C1orf229Q6ZS94 237 aaPredicted RBP13.34□□□□□ -0.27
SKA2-209ENST00000583976 ZBTB46Q86UZ6 589 aa13.34□□□□□ -0.27
SKA2-209ENST00000583976 OR2T4Q8NH00 348 aa13.34□□□□□ -0.27
SKA2-209ENST00000583976 ZNF416Q9BWM5 594 aa13.34□□□□□ -0.27
SKA2-209ENST00000583976 HCAR1Q9BXC0 346 aa13.34□□□□□ -0.27
SKA2-209ENST00000583976 MS4A5Q9H3V2 200 aa13.34□□□□□ -0.27
SKA2-209ENST00000583976 USE1Q9NZ43 259 aa13.34□□□□□ -0.27
SKA2-209ENST00000583976 ENOPH1Q9UHY7 261 aa13.34□□□□□ -0.27
SKA2-209ENST00000583976 METRNQ9UJH8 293 aa13.34□□□□□ -0.27
SKA2-209ENST00000583976 ORC6Q9Y5N6 252 aa13.34□□□□□ -0.27
SKA2-209ENST00000583976 CACNG2Q9Y698 323 aa13.34□□□□□ -0.27
SKA2-209ENST00000583976 DYSFO75923 2080 aa13.33□□□□□ -0.27
SKA2-209ENST00000583976 LOC105371242A0A075B767 164 aa13.33□□□□□ -0.28
SKA2-209ENST00000583976 TVP23AA6NH52 213 aa13.33□□□□□ -0.28
SKA2-209ENST00000583976 ZAR1LA6NP61 321 aa13.33□□□□□ -0.28
SKA2-209ENST00000583976 PRR23D1E9PI22 279 aaPredicted RBP13.33□□□□□ -0.28
SKA2-209ENST00000583976 M0R129 80 aa13.33□□□□□ -0.28
SKA2-209ENST00000583976 AVPP01185 164 aa13.33□□□□□ -0.28
SKA2-209ENST00000583976 TFP02787 698 aa13.33□□□□□ -0.28
SKA2-209ENST00000583976 SERPINA5P05154 406 aa13.33□□□□□ -0.28
SKA2-209ENST00000583976 CST2P09228 141 aa13.33□□□□□ -0.28
SKA2-209ENST00000583976 PRR23D2P0DMB1 279 aaPredicted RBP13.33□□□□□ -0.28
SKA2-209ENST00000583976 SPI1P17947 270 aa13.33□□□□□ -0.28
SKA2-209ENST00000583976 PCMT1P22061 227 aa13.33□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms