RNA–Protein interactions for RNA: ENST00000583649.1

CASC3-208, Transcript of CASC3, exon junction complex subunit, humanhuman

TSL 3

Gene CASC3, Length 577 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC3-208ENST00000583649 RNF7Q9UBF6 113 aa9.14□□□□□ -0.95
CASC3-208ENST00000583649 AURKCQ9UQB9 309 aa9.14□□□□□ -0.95
CASC3-208ENST00000583649 F5H5P2 479 aa9.13□□□□□ -0.95
CASC3-208ENST00000583649 H3BUX3 64 aa9.13□□□□□ -0.95
CASC3-208ENST00000583649 LGALS8O00214 317 aa9.13□□□□□ -0.95
CASC3-208ENST00000583649 DOK2O60496 412 aa9.13□□□□□ -0.95
CASC3-208ENST00000583649 ZFPL1O95159 310 aa9.13□□□□□ -0.95
CASC3-208ENST00000583649 ALDOBP05062 364 aa9.13□□□□□ -0.95
CASC3-208ENST00000583649 ASAH2BP0C7U1 165 aa9.13□□□□□ -0.95
CASC3-208ENST00000583649 LMO1P25800 156 aa9.13□□□□□ -0.95
CASC3-208ENST00000583649 MSX2P35548 267 aaPredicted RBP9.13□□□□□ -0.95
CASC3-208ENST00000583649 RPL14P50914 215 aaKnown RBP9.13□□□□□ -0.95
CASC3-208ENST00000583649 RGNQ15493 299 aa9.13□□□□□ -0.95
CASC3-208ENST00000583649 ARSJQ5FYB0 599 aaPredicted RBP9.13□□□□□ -0.95
CASC3-208ENST00000583649 FAM201AQ5SY85 155 aa9.13□□□□□ -0.95
CASC3-208ENST00000583649 OGFOD2Q6N063 350 aa9.13□□□□□ -0.95
CASC3-208ENST00000583649 C1orf94Q6P1W5 598 aa9.13□□□□□ -0.95
CASC3-208ENST00000583649 MSANTD1Q6ZTZ1 278 aa9.13□□□□□ -0.95
CASC3-208ENST00000583649 BEND2Q8NDZ0 799 aa9.13□□□□□ -0.95
CASC3-208ENST00000583649 MCHR1Q99705 422 aa9.13□□□□□ -0.95
CASC3-208ENST00000583649 SSX3Q99909 188 aa9.13□□□□□ -0.95
CASC3-208ENST00000583649 DCTN5Q9BTE1 182 aa9.13□□□□□ -0.95
CASC3-208ENST00000583649 ALG12Q9BV10 488 aa9.13□□□□□ -0.95
CASC3-208ENST00000583649 PALMDQ9NP74 551 aa9.13□□□□□ -0.95
CASC3-208ENST00000583649 STARD10Q9Y365 291 aa9.13□□□□□ -0.95
CASC3-208ENST00000583649 UGT2A1Q9Y4X1 527 aa9.13□□□□□ -0.95
CASC3-208ENST00000583649 IGHV3-64DA0A0J9YX35 117 aa9.12□□□□□ -0.95
CASC3-208ENST00000583649 A0A1W2PPL8 197 aa9.12□□□□□ -0.95
CASC3-208ENST00000583649 WI2-2373I1.2A0A1W2PRP0 233 aa9.12□□□□□ -0.95
CASC3-208ENST00000583649 KPNA4O00629 521 aaPredicted RBP9.12□□□□□ -0.95
CASC3-208ENST00000583649 SGCEO43556 437 aa9.12□□□□□ -0.95
CASC3-208ENST00000583649 OR10H3O60404 316 aa9.12□□□□□ -0.95
CASC3-208ENST00000583649 IFNW1P05000 195 aa9.12□□□□□ -0.95
CASC3-208ENST00000583649 ZNF26P17031 533 aaPredicted RBP9.12□□□□□ -0.95
CASC3-208ENST00000583649 BLMHQ13867 455 aa9.12□□□□□ -0.95
CASC3-208ENST00000583649 SFRP4Q6FHJ7 346 aaPredicted RBP9.12□□□□□ -0.95
CASC3-208ENST00000583649 OR2T2Q6IF00 324 aa9.12□□□□□ -0.95
CASC3-208ENST00000583649 FBXW12Q6X9E4 464 aa9.12□□□□□ -0.95
CASC3-208ENST00000583649 LINC00114Q6XXX2 140 aa9.12□□□□□ -0.95
CASC3-208ENST00000583649 RNF144BQ7Z419 303 aa9.12□□□□□ -0.95
CASC3-208ENST00000583649 ARMC8Q8IUR7 673 aa9.12□□□□□ -0.95
CASC3-208ENST00000583649 ST8SIA4Q92187 359 aa9.12□□□□□ -0.95
CASC3-208ENST00000583649 MAL2Q969L2 176 aa9.12□□□□□ -0.95
CASC3-208ENST00000583649 APOBEC3DQ96AK3 386 aaPredicted RBP9.12□□□□□ -0.95
CASC3-208ENST00000583649 SLC22A4Q9H015 551 aa9.12□□□□□ -0.95
CASC3-208ENST00000583649 AIG1Q9NVV5 245 aa9.12□□□□□ -0.95
CASC3-208ENST00000583649 RPUSD1Q9UJJ7 312 aaKnown RBP9.12□□□□□ -0.95
CASC3-208ENST00000583649 ANGPT4Q9Y264 503 aa9.12□□□□□ -0.95
CASC3-208ENST00000583649 RAP2CQ9Y3L5 183 aa9.12□□□□□ -0.95
CASC3-208ENST00000583649 NOTCH3Q9UM47 2321 aa9.11□□□□□ -0.95
CASC3-208ENST00000583649 OOEPA6NGQ2 149 aa9.11□□□□□ -0.95
CASC3-208ENST00000583649 NPIPB13A6NJU9 1138 aa9.11□□□□□ -0.95
CASC3-208ENST00000583649 IQCF6A8MYZ5 107 aa9.11□□□□□ -0.95
CASC3-208ENST00000583649 NPIPB4C9JG80 1138 aa9.11□□□□□ -0.95
CASC3-208ENST00000583649 H3BUI4 141 aa9.11□□□□□ -0.95
CASC3-208ENST00000583649 CLIC1O00299 241 aa9.11□□□□□ -0.95
CASC3-208ENST00000583649 DVL1O14640 695 aa9.11□□□□□ -0.95
CASC3-208ENST00000583649 FAM20BO75063 409 aa9.11□□□□□ -0.95
CASC3-208ENST00000583649 SLC22A3O75751 556 aa9.11□□□□□ -0.95
CASC3-208ENST00000583649 OPN1SWP03999 348 aa9.11□□□□□ -0.95
CASC3-208ENST00000583649 CD28P10747 220 aa9.11□□□□□ -0.95
CASC3-208ENST00000583649 BMP2P12643 396 aa9.11□□□□□ -0.95
CASC3-208ENST00000583649 PPIBP23284 216 aaKnown RBP9.11□□□□□ -0.95
CASC3-208ENST00000583649 SAA4P35542 130 aa9.11□□□□□ -0.95
CASC3-208ENST00000583649 UBE2E1P51965 193 aa9.11□□□□□ -0.95
CASC3-208ENST00000583649 UGT2B15P54855 530 aa9.11□□□□□ -0.95
CASC3-208ENST00000583649 CDK6Q00534 326 aa9.11□□□□□ -0.95
CASC3-208ENST00000583649 RPL18Q07020 188 aaKnown RBP9.11□□□□□ -0.95
CASC3-208ENST00000583649 MZT1Q08AG7 82 aa9.11□□□□□ -0.95
CASC3-208ENST00000583649 ECH1Q13011 328 aa9.11□□□□□ -0.95
CASC3-208ENST00000583649 AANATQ16613 207 aa9.11□□□□□ -0.95
CASC3-208ENST00000583649 LRRC75BQ2VPJ9 315 aa9.11□□□□□ -0.95
CASC3-208ENST00000583649 GCNT6Q5T4J0 391 aa9.11□□□□□ -0.95
CASC3-208ENST00000583649 SLC25A47Q6Q0C1 308 aa9.11□□□□□ -0.95
CASC3-208ENST00000583649 UNQ9370/PRO34162Q6UXP9 181 aa9.11□□□□□ -0.95
CASC3-208ENST00000583649 MEPCEQ7L2J0 689 aaKnown RBP9.11□□□□□ -0.95
CASC3-208ENST00000583649 GOLGA6L1Q8N7Z2 621 aa9.11□□□□□ -0.95
CASC3-208ENST00000583649 ZNF781Q8N8C0 355 aa9.11□□□□□ -0.95
CASC3-208ENST00000583649 BOLLQ8N9W6 283 aaKnown RBP9.11□□□□□ -0.95
CASC3-208ENST00000583649 PLPP7Q8NBV4 271 aa9.11□□□□□ -0.95
CASC3-208ENST00000583649 BHLHE23Q8NDY6 225 aa9.11□□□□□ -0.95
CASC3-208ENST00000583649 NFKBIDQ8NI38 313 aa9.11□□□□□ -0.95
CASC3-208ENST00000583649 PPP1R35Q8TAP8 253 aa9.11□□□□□ -0.95
CASC3-208ENST00000583649 UBLCP1Q8WVY7 318 aaPredicted RBP9.11□□□□□ -0.95
CASC3-208ENST00000583649 NKX3-1Q99801 234 aaPredicted RBP9.11□□□□□ -0.95
CASC3-208ENST00000583649 CITED2Q99967 270 aaPredicted RBP9.11□□□□□ -0.95
CASC3-208ENST00000583649 ECSITQ9BQ95 431 aa9.11□□□□□ -0.95
CASC3-208ENST00000583649 SEMA6AQ9H2E6 1030 aa9.11□□□□□ -0.95
CASC3-208ENST00000583649 PTTG3PQ9NZH4 202 aa9.11□□□□□ -0.95
CASC3-208ENST00000583649 CTSZQ9UBR2 303 aa9.11□□□□□ -0.95
CASC3-208ENST00000583649 SF3B6Q9Y3B4 125 aaKnown RBP9.11□□□□□ -0.95
CASC3-208ENST00000583649 TRAPPC13A5PLN9 417 aa9.1□□□□□ -0.95
CASC3-208ENST00000583649 A6NIZ1 184 aa9.1□□□□□ -0.95
CASC3-208ENST00000583649 POLR3GO15318 223 aaPredicted RBP9.1□□□□□ -0.95
CASC3-208ENST00000583649 BPGMP07738 259 aa9.1□□□□□ -0.95
CASC3-208ENST00000583649 IDO1P14902 403 aa9.1□□□□□ -0.95
CASC3-208ENST00000583649 ABCE1P61221 599 aaKnown RBP9.1□□□□□ -0.95
CASC3-208ENST00000583649 RAP1BP61224 184 aa9.1□□□□□ -0.95
CASC3-208ENST00000583649 RAP1AP62834 184 aa9.1□□□□□ -0.95
CASC3-208ENST00000583649 FMODQ06828 376 aa9.1□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 41.4 ms