RNA–Protein interactions for RNA: ENST00000582955.5

SMARCE1-218, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 5

Gene SMARCE1, Length 621 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-218ENST00000582955 H3BSA7 217 aa10.78□□□□□ -0.68
SMARCE1-218ENST00000582955 NDUFS8O00217 210 aa10.78□□□□□ -0.68
SMARCE1-218ENST00000582955 ICMTO60725 284 aa10.78□□□□□ -0.68
SMARCE1-218ENST00000582955 IGHV3-13P01766 116 aa10.78□□□□□ -0.68
SMARCE1-218ENST00000582955 HEXAP06865 529 aa10.78□□□□□ -0.68
SMARCE1-218ENST00000582955 SPARCP09486 303 aa10.78□□□□□ -0.68
SMARCE1-218ENST00000582955 GGT2P36268 569 aa10.78□□□□□ -0.68
SMARCE1-218ENST00000582955 DAPP51397 102 aa10.78□□□□□ -0.68
SMARCE1-218ENST00000582955 MBNL2Q5VZF2 373 aaKnown RBP10.78□□□□□ -0.68
SMARCE1-218ENST00000582955 TMEM236Q5W0B7 351 aa10.78□□□□□ -0.68
SMARCE1-218ENST00000582955 FAHD1Q6P587 224 aa10.78□□□□□ -0.68
SMARCE1-218ENST00000582955 HIPK1Q86Z02 1210 aa10.78□□□□□ -0.68
SMARCE1-218ENST00000582955 ZDHHC13Q8IUH4 622 aa10.78□□□□□ -0.68
SMARCE1-218ENST00000582955 ZNF511Q8NB15 262 aa10.78□□□□□ -0.68
SMARCE1-218ENST00000582955 UBASH3BQ8TF42 649 aa10.78□□□□□ -0.68
SMARCE1-218ENST00000582955 GTF3AQ92664 365 aaKnown RBP10.78□□□□□ -0.68
SMARCE1-218ENST00000582955 PLEKHA8Q96JA3 519 aa10.78□□□□□ -0.68
SMARCE1-218ENST00000582955 DCLRE1CQ96SD1 692 aaKnown RBP10.78□□□□□ -0.68
SMARCE1-218ENST00000582955 ATF6BQ99941 703 aa10.78□□□□□ -0.68
SMARCE1-218ENST00000582955 TEX12Q9BXU0 123 aa10.78□□□□□ -0.68
SMARCE1-218ENST00000582955 WDR76Q9H967 626 aa10.78□□□□□ -0.68
SMARCE1-218ENST00000582955 COMMD3-BMI1R4GMX3 469 aa10.78□□□□□ -0.68
SMARCE1-218ENST00000582955 C17orf100A8MU93 164 aa10.77□□□□□ -0.69
SMARCE1-218ENST00000582955 PRR23D1E9PI22 279 aaPredicted RBP10.77□□□□□ -0.69
SMARCE1-218ENST00000582955 F5H5K5 113 aa10.77□□□□□ -0.69
SMARCE1-218ENST00000582955 LYNX1G3V0Z9 82 aa10.77□□□□□ -0.69
SMARCE1-218ENST00000582955 SURF4O15260 269 aa10.77□□□□□ -0.69
SMARCE1-218ENST00000582955 TPD52L2O43399 206 aaKnown RBP10.77□□□□□ -0.69
SMARCE1-218ENST00000582955 TIMM8AO60220 97 aaPredicted RBP10.77□□□□□ -0.69
SMARCE1-218ENST00000582955 HPXP02790 462 aa10.77□□□□□ -0.69
SMARCE1-218ENST00000582955 HMGN1P05114 100 aa10.77□□□□□ -0.69
SMARCE1-218ENST00000582955 PRR23D2P0DMB1 279 aaPredicted RBP10.77□□□□□ -0.69
SMARCE1-218ENST00000582955 LYNX1P0DP58 116 aa10.77□□□□□ -0.69
SMARCE1-218ENST00000582955 NR4A2P43354 598 aa10.77□□□□□ -0.69
SMARCE1-218ENST00000582955 MAGEB1P43366 347 aa10.77□□□□□ -0.69
SMARCE1-218ENST00000582955 RGS6P49758 472 aa10.77□□□□□ -0.69
SMARCE1-218ENST00000582955 ENTPD1P49961 510 aa10.77□□□□□ -0.69
SMARCE1-218ENST00000582955 ZNF81P51508 661 aa10.77□□□□□ -0.69
SMARCE1-218ENST00000582955 BLVRAP53004 296 aa10.77□□□□□ -0.69
SMARCE1-218ENST00000582955 CDK5Q00535 292 aa10.77□□□□□ -0.69
SMARCE1-218ENST00000582955 GGTLC2Q14390 218 aa10.77□□□□□ -0.69
SMARCE1-218ENST00000582955 KPNB1Q14974 876 aaKnown RBP10.77□□□□□ -0.69
SMARCE1-218ENST00000582955 PLBD1Q6P4A8 553 aa10.77□□□□□ -0.69
SMARCE1-218ENST00000582955 PYDC1Q8WXC3 89 aa10.77□□□□□ -0.69
SMARCE1-218ENST00000582955 MAP6Q96JE9 813 aa10.77□□□□□ -0.69
SMARCE1-218ENST00000582955 COG8Q96MW5 612 aa10.77□□□□□ -0.69
SMARCE1-218ENST00000582955 HCAR1Q9BXC0 346 aa10.77□□□□□ -0.69
SMARCE1-218ENST00000582955 OR51V1Q9H2C8 321 aa10.77□□□□□ -0.69
SMARCE1-218ENST00000582955 SEMA6AQ9H2E6 1030 aa10.77□□□□□ -0.69
SMARCE1-218ENST00000582955 POFUT1Q9H488 388 aa10.77□□□□□ -0.69
SMARCE1-218ENST00000582955 KRT84Q9NSB2 600 aa10.77□□□□□ -0.69
SMARCE1-218ENST00000582955 PTTG3PQ9NZH4 202 aa10.77□□□□□ -0.69
SMARCE1-218ENST00000582955 STARD10Q9Y365 291 aa10.77□□□□□ -0.69
SMARCE1-218ENST00000582955 SPRY3O43610 288 aa10.76□□□□□ -0.69
SMARCE1-218ENST00000582955 NCR1O76036 304 aa10.76□□□□□ -0.69
SMARCE1-218ENST00000582955 USF1P22415 310 aaPredicted RBP10.76□□□□□ -0.69
SMARCE1-218ENST00000582955 TUBG1P23258 451 aa10.76□□□□□ -0.69
SMARCE1-218ENST00000582955 GSTT1P30711 240 aa10.76□□□□□ -0.69
SMARCE1-218ENST00000582955 CRISP1P54107 249 aa10.76□□□□□ -0.69
SMARCE1-218ENST00000582955 ACTR3P61158 418 aa10.76□□□□□ -0.69
SMARCE1-218ENST00000582955 CCL8P80075 99 aa10.76□□□□□ -0.69
SMARCE1-218ENST00000582955 LOXL1Q08397 574 aaPredicted RBP10.76□□□□□ -0.69
SMARCE1-218ENST00000582955 ECH1Q13011 328 aa10.76□□□□□ -0.69
SMARCE1-218ENST00000582955 TSTQ16762 297 aaKnown RBP10.76□□□□□ -0.69
SMARCE1-218ENST00000582955 PCGF3Q3KNV8 242 aa10.76□□□□□ -0.69
SMARCE1-218ENST00000582955 KLHL12Q53G59 568 aa10.76□□□□□ -0.69
SMARCE1-218ENST00000582955 TMEM255AQ5JRV8 349 aa10.76□□□□□ -0.69
SMARCE1-218ENST00000582955 DCXRQ7Z4W1 244 aa10.76□□□□□ -0.69
SMARCE1-218ENST00000582955 ERI1Q8IV48 349 aaKnown RBP10.76□□□□□ -0.69
SMARCE1-218ENST00000582955 ZNF786Q8N393 782 aa10.76□□□□□ -0.69
SMARCE1-218ENST00000582955 PARP8Q8N3A8 854 aa10.76□□□□□ -0.69
SMARCE1-218ENST00000582955 ZNF540Q8NDQ6 660 aa10.76□□□□□ -0.69
SMARCE1-218ENST00000582955 OR5L1Q8NGL2 311 aa10.76□□□□□ -0.69
SMARCE1-218ENST00000582955 OR6N2Q8NGY6 317 aa10.76□□□□□ -0.69
SMARCE1-218ENST00000582955 APOBEC3DQ96AK3 386 aaPredicted RBP10.76□□□□□ -0.69
SMARCE1-218ENST00000582955 CMBLQ96DG6 245 aa10.76□□□□□ -0.69
SMARCE1-218ENST00000582955 BPESC1Q9GZL8 116 aa10.76□□□□□ -0.69
SMARCE1-218ENST00000582955 SLC25A19Q9HC21 320 aa10.76□□□□□ -0.69
SMARCE1-218ENST00000582955 PNRC2Q9NPJ4 139 aaKnown RBP10.76□□□□□ -0.69
SMARCE1-218ENST00000582955 TUBG2Q9NRH3 451 aa10.76□□□□□ -0.69
SMARCE1-218ENST00000582955 DECR2Q9NUI1 292 aa10.76□□□□□ -0.69
SMARCE1-218ENST00000582955 CR1P17927 2039 aa10.75□□□□□ -0.69
SMARCE1-218ENST00000582955 A0A096LNT2 108 aa10.75□□□□□ -0.69
SMARCE1-218ENST00000582955 VWC2LB2RUY7 222 aa10.75□□□□□ -0.69
SMARCE1-218ENST00000582955 J3QW42 95 aa10.75□□□□□ -0.69
SMARCE1-218ENST00000582955 ZNF593O00488 134 aaPredicted RBP10.75□□□□□ -0.69
SMARCE1-218ENST00000582955 MITFO75030 526 aaPredicted RBP10.75□□□□□ -0.69
SMARCE1-218ENST00000582955 GLCEO94923 617 aa10.75□□□□□ -0.69
SMARCE1-218ENST00000582955 ACSM4P0C7M7 580 aa10.75□□□□□ -0.69
SMARCE1-218ENST00000582955 PSKH1P11801 424 aa10.75□□□□□ -0.69
SMARCE1-218ENST00000582955 LIPAP38571 399 aa10.75□□□□□ -0.69
SMARCE1-218ENST00000582955 MMP15P51511 669 aa10.75□□□□□ -0.69
SMARCE1-218ENST00000582955 TPTEP56180 551 aa10.75□□□□□ -0.69
SMARCE1-218ENST00000582955 PSG7Q13046 419 aa10.75□□□□□ -0.69
SMARCE1-218ENST00000582955 TAF13Q15543 124 aa10.75□□□□□ -0.69
SMARCE1-218ENST00000582955 SNAPC1Q16533 368 aa10.75□□□□□ -0.69
SMARCE1-218ENST00000582955 ZMAT1Q5H9K5 638 aa10.75□□□□□ -0.69
SMARCE1-218ENST00000582955 LINC01590Q5TEZ4 76 aa10.75□□□□□ -0.69
SMARCE1-218ENST00000582955 CPOQ8IVL8 374 aa10.75□□□□□ -0.69
SMARCE1-218ENST00000582955 OR10S1Q8NGN2 331 aa10.75□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 106.3 ms