RNA–Protein interactions for RNA: ENST00000582092.1

SS18-220, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 1 (best)

Gene SS18, Length 215 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-220ENST00000582092 ZGRF1Q86YA3 2104 aa8.22□□□□□ -1.09
SS18-220ENST00000582092 C20orf196Q8IYI0 205 aa8.22□□□□□ -1.09
SS18-220ENST00000582092 PRSS35Q8N3Z0 413 aa8.22□□□□□ -1.09
SS18-220ENST00000582092 RBMXL3Q8N7X1 1067 aaKnown RBP8.22□□□□□ -1.09
SS18-220ENST00000582092 GALNT11Q8NCW6 608 aa8.22□□□□□ -1.09
SS18-220ENST00000582092 MDS2Q8NDY4 140 aa8.22□□□□□ -1.09
SS18-220ENST00000582092 CHPT1Q8WUD6 406 aa8.22□□□□□ -1.09
SS18-220ENST00000582092 RNF133Q8WVZ7 376 aa8.22□□□□□ -1.09
SS18-220ENST00000582092 TMEM106AQ96A25 262 aa8.22□□□□□ -1.09
SS18-220ENST00000582092 ZNF385AQ96PM9 386 aaKnown RBP8.22□□□□□ -1.09
SS18-220ENST00000582092 AMELYQ99218 206 aa8.22□□□□□ -1.09
SS18-220ENST00000582092 HDHD2Q9H0R4 259 aa8.22□□□□□ -1.09
SS18-220ENST00000582092 SLC6A15Q9H2J7 730 aa8.22□□□□□ -1.09
SS18-220ENST00000582092 MOB1AQ9H8S9 216 aa8.22□□□□□ -1.09
SS18-220ENST00000582092 SP140LQ9H930 580 aa8.22□□□□□ -1.09
SS18-220ENST00000582092 POLE4Q9NR33 117 aa8.22□□□□□ -1.09
SS18-220ENST00000582092 EXTL2Q9UBQ6 330 aa8.22□□□□□ -1.09
SS18-220ENST00000582092 UPB1Q9UBR1 384 aa8.22□□□□□ -1.09
SS18-220ENST00000582092 CYB5R1Q9UHQ9 305 aa8.22□□□□□ -1.09
SS18-220ENST00000582092 CAMK2AQ9UQM7 478 aa8.22□□□□□ -1.09
SS18-220ENST00000582092 SLC22A13Q9Y226 551 aa8.22□□□□□ -1.09
SS18-220ENST00000582092 SHANK1Q9Y566 2161 aa8.21□□□□□ -1.09
SS18-220ENST00000582092 IGKV1D-43A0A0B4J1Z2 117 aa8.21□□□□□ -1.1
SS18-220ENST00000582092 TRBV5-5A0A0J9YX44 114 aa8.21□□□□□ -1.1
SS18-220ENST00000582092 A0A1B0GTH9 108 aa8.21□□□□□ -1.1
SS18-220ENST00000582092 PRR32B1ATL7 298 aa8.21□□□□□ -1.1
SS18-220ENST00000582092 H0YC42 278 aa8.21□□□□□ -1.1
SS18-220ENST00000582092 PYCARD-AS1I3L0S3 204 aa8.21□□□□□ -1.1
SS18-220ENST00000582092 SYT7O43581 403 aa8.21□□□□□ -1.1
SS18-220ENST00000582092 SLC2A2P11168 524 aaPredicted RBP8.21□□□□□ -1.1
SS18-220ENST00000582092 EPXP11678 715 aa8.21□□□□□ -1.1
SS18-220ENST00000582092 ZNF20P17024 532 aa8.21□□□□□ -1.1
SS18-220ENST00000582092 APEX1P27695 318 aaKnown RBP8.21□□□□□ -1.1
SS18-220ENST00000582092 GNALP38405 381 aa8.21□□□□□ -1.1
SS18-220ENST00000582092 SLC6A9P48067 706 aa8.21□□□□□ -1.1
SS18-220ENST00000582092 SELENOPP49908 381 aa8.21□□□□□ -1.1
SS18-220ENST00000582092 PRKXP51817 358 aa8.21□□□□□ -1.1
SS18-220ENST00000582092 PCBD1P61457 104 aa8.21□□□□□ -1.1
SS18-220ENST00000582092 RPS11P62280 158 aaKnown RBP eCLIP8.21□□□□□ -1.1
SS18-220ENST00000582092 GALK2Q01415 458 aa8.21□□□□□ -1.1
SS18-220ENST00000582092 RNPS1Q15287 305 aaKnown RBP8.21□□□□□ -1.1
SS18-220ENST00000582092 HIST3H3Q16695 136 aa8.21□□□□□ -1.1
SS18-220ENST00000582092 CEP78Q5JTW2 689 aa8.21□□□□□ -1.1
SS18-220ENST00000582092 C10orf128Q5T292 105 aa8.21□□□□□ -1.1
SS18-220ENST00000582092 MZT2BQ6NZ67 158 aa8.21□□□□□ -1.1
SS18-220ENST00000582092 STAC2Q6ZMT1 411 aa8.21□□□□□ -1.1
SS18-220ENST00000582092 DCDC5Q6ZRR9 648 aa8.21□□□□□ -1.1
SS18-220ENST00000582092 P4HA3Q7Z4N8 544 aa8.21□□□□□ -1.1
SS18-220ENST00000582092 BTLAQ7Z6A9 289 aa8.21□□□□□ -1.1
SS18-220ENST00000582092 LYSMD2Q8IV50 215 aa8.21□□□□□ -1.1
SS18-220ENST00000582092 ZNF100Q8IYN0 542 aa8.21□□□□□ -1.1
SS18-220ENST00000582092 RDH10Q8IZV5 341 aa8.21□□□□□ -1.1
SS18-220ENST00000582092 LRRC18Q8N456 261 aa8.21□□□□□ -1.1
SS18-220ENST00000582092 ST7LQ8TDW4 575 aa8.21□□□□□ -1.1
SS18-220ENST00000582092 C15orf40Q8WUR7 153 aa8.21□□□□□ -1.1
SS18-220ENST00000582092 HSD17B8Q92506 261 aa8.21□□□□□ -1.1
SS18-220ENST00000582092 SPTSSAQ969W0 71 aa8.21□□□□□ -1.1
SS18-220ENST00000582092 S100A16Q96FQ6 103 aaKnown RBP8.21□□□□□ -1.1
SS18-220ENST00000582092 MAP6Q96JE9 813 aa8.21□□□□□ -1.1
SS18-220ENST00000582092 CMTM3Q96MX0 182 aa8.21□□□□□ -1.1
SS18-220ENST00000582092 RNF121Q9H920 327 aa8.21□□□□□ -1.1
SS18-220ENST00000582092 ACKR4Q9NPB9 350 aa8.21□□□□□ -1.1
SS18-220ENST00000582092 ASH2LQ9UBL3 628 aa8.21□□□□□ -1.1
SS18-220ENST00000582092 MALT1Q9UDY8 824 aa8.21□□□□□ -1.1
SS18-220ENST00000582092 CLEC4AQ9UMR7 237 aa8.21□□□□□ -1.1
SS18-220ENST00000582092 FLVCR1Q9Y5Y0 555 aa8.21□□□□□ -1.1
SS18-220ENST00000582092 PCSK5Q92824 1860 aa8.21□□□□□ -1.1
SS18-220ENST00000582092 A0A1B0GVG6 124 aa8.2□□□□□ -1.1
SS18-220ENST00000582092 LINC00854A0A1B0GVQ3 168 aa8.2□□□□□ -1.1
SS18-220ENST00000582092 ANKRD61A6NGH8 418 aa8.2□□□□□ -1.1
SS18-220ENST00000582092 IFITM5A6NNB3 132 aa8.2□□□□□ -1.1
SS18-220ENST00000582092 AIPO00170 330 aa8.2□□□□□ -1.1
SS18-220ENST00000582092 DVL2O14641 736 aa8.2□□□□□ -1.1
SS18-220ENST00000582092 MAGEB3O15480 346 aa8.2□□□□□ -1.1
SS18-220ENST00000582092 GLSO94925 669 aaPredicted RBP8.2□□□□□ -1.1
SS18-220ENST00000582092 CALCBP10092 127 aa8.2□□□□□ -1.1
SS18-220ENST00000582092 ZNF708P17019 499 aa8.2□□□□□ -1.1
SS18-220ENST00000582092 ZNF24P17028 368 aa8.2□□□□□ -1.1
SS18-220ENST00000582092 ELK1P19419 428 aa8.2□□□□□ -1.1
SS18-220ENST00000582092 KLK2P20151 261 aa8.2□□□□□ -1.1
SS18-220ENST00000582092 KIR3DL2P43630 455 aa8.2□□□□□ -1.1
SS18-220ENST00000582092 PITPNBP48739 271 aa8.2□□□□□ -1.1
SS18-220ENST00000582092 CX3CR1P49238 355 aa8.2□□□□□ -1.1
SS18-220ENST00000582092 LHX2P50458 406 aa8.2□□□□□ -1.1
SS18-220ENST00000582092 TNFSF10P50591 281 aa8.2□□□□□ -1.1
SS18-220ENST00000582092 MMP16P51512 607 aa8.2□□□□□ -1.1
SS18-220ENST00000582092 CAPZA1P52907 286 aa8.2□□□□□ -1.1
SS18-220ENST00000582092 MRPS34P82930 218 aaKnown RBP8.2□□□□□ -1.1
SS18-220ENST00000582092 MFGE8Q08431 387 aaPredicted RBP8.2□□□□□ -1.1
SS18-220ENST00000582092 SCRN3Q0VDG4 424 aa8.2□□□□□ -1.1
SS18-220ENST00000582092 ECH1Q13011 328 aa8.2□□□□□ -1.1
SS18-220ENST00000582092 ZNF169Q14929 603 aaPredicted RBP8.2□□□□□ -1.1
SS18-220ENST00000582092 IGFBP7Q16270 282 aa8.2□□□□□ -1.1
SS18-220ENST00000582092 HYAL4Q2M3T9 481 aa8.2□□□□□ -1.1
SS18-220ENST00000582092 SLC25A35Q3KQZ1 300 aa8.2□□□□□ -1.1
SS18-220ENST00000582092 PLEKHN1Q494U1 663 aaPredicted RBP8.2□□□□□ -1.1
SS18-220ENST00000582092 UBE2NLQ5JXB2 153 aa8.2□□□□□ -1.1
SS18-220ENST00000582092 HES5Q5TA89 166 aa8.2□□□□□ -1.1
SS18-220ENST00000582092 STEAP3Q658P3 488 aa8.2□□□□□ -1.1
SS18-220ENST00000582092 ZNF57Q68EA5 555 aaPredicted RBP8.2□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 126.9 ms