RNA–Protein interactions for RNA: ENST00000581265.1

RFFL-209, Transcript of ring finger and FYVE like domain containing E3 ubiquitin protein ligase, humanhuman

TSL 4

Gene RFFL, Length 596 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFFL-209ENST00000581265 MTNR1AP48039 350 aa8.88□□□□□ -0.99
RFFL-209ENST00000581265 RGS6P49758 472 aa8.88□□□□□ -0.99
RFFL-209ENST00000581265 MMP16P51512 607 aa8.88□□□□□ -0.99
RFFL-209ENST00000581265 HIST1H3AP68431 136 aa8.88□□□□□ -0.99
RFFL-209ENST00000581265 IL13RA1P78552 427 aa8.88□□□□□ -0.99
RFFL-209ENST00000581265 HLXQ14774 488 aaPredicted RBP8.88□□□□□ -0.99
RFFL-209ENST00000581265 SLC9A3R2Q15599 337 aa8.88□□□□□ -0.99
RFFL-209ENST00000581265 KCNMB1Q16558 191 aa8.88□□□□□ -0.99
RFFL-209ENST00000581265 ZNF181Q2M3W8 571 aa8.88□□□□□ -0.99
RFFL-209ENST00000581265 IFI44LQ53G44 452 aa8.88□□□□□ -0.99
RFFL-209ENST00000581265 CCDC92Q53HC0 331 aaPredicted RBP8.88□□□□□ -0.99
RFFL-209ENST00000581265 HIST2H3PS2Q5TEC6 136 aa8.88□□□□□ -0.99
RFFL-209ENST00000581265 C1orf94Q6P1W5 598 aa8.88□□□□□ -0.99
RFFL-209ENST00000581265 LRRN1Q6UXK5 716 aa8.88□□□□□ -0.99
RFFL-209ENST00000581265 HIST2H3AQ71DI3 136 aa8.88□□□□□ -0.99
RFFL-209ENST00000581265 CBLL1Q75N03 491 aa8.88□□□□□ -0.99
RFFL-209ENST00000581265 RRM2BQ7LG56 351 aa8.88□□□□□ -0.99
RFFL-209ENST00000581265 TSEN54Q7Z6J9 526 aaKnown RBP8.88□□□□□ -0.99
RFFL-209ENST00000581265 SLC7A13Q8TCU3 470 aa8.88□□□□□ -0.99
RFFL-209ENST00000581265 RAB40AQ8WXH6 277 aa8.88□□□□□ -0.99
RFFL-209ENST00000581265 APOBEC3DQ96AK3 386 aaPredicted RBP8.88□□□□□ -0.99
RFFL-209ENST00000581265 UPRTQ96BW1 309 aa8.88□□□□□ -0.99
RFFL-209ENST00000581265 ZNF582Q96NG8 517 aaPredicted RBP8.88□□□□□ -0.99
RFFL-209ENST00000581265 ZNF570Q96NI8 536 aa8.88□□□□□ -0.99
RFFL-209ENST00000581265 SSBP3Q9BWW4 388 aaPredicted RBP8.88□□□□□ -0.99
RFFL-209ENST00000581265 NDEL1Q9GZM8 345 aa8.88□□□□□ -0.99
RFFL-209ENST00000581265 MS4A7Q9GZW8 240 aaPredicted RBP8.88□□□□□ -0.99
RFFL-209ENST00000581265 SYT4Q9H2B2 425 aa8.88□□□□□ -0.99
RFFL-209ENST00000581265 VSX1Q9NZR4 365 aaPredicted RBP8.88□□□□□ -0.99
RFFL-209ENST00000581265 MIOXQ9UGB7 285 aa8.88□□□□□ -0.99
RFFL-209ENST00000581265 SIGLEC7Q9Y286 467 aa8.88□□□□□ -0.99
RFFL-209ENST00000581265 TMEM5Q9Y2B1 443 aa8.88□□□□□ -0.99
RFFL-209ENST00000581265 COA3Q9Y2R0 106 aaPredicted RBP8.88□□□□□ -0.99
RFFL-209ENST00000581265 TRRAPQ9Y4A5 3859 aa8.88□□□□□ -0.99
RFFL-209ENST00000581265 KIR2DS1A0A191URI9 304 aa8.87□□□□□ -0.99
RFFL-209ENST00000581265 A0A1W2PRQ8 180 aa8.87□□□□□ -0.99
RFFL-209ENST00000581265 CXCR6O00574 342 aa8.87□□□□□ -0.99
RFFL-209ENST00000581265 SLC22A2O15244 555 aa8.87□□□□□ -0.99
RFFL-209ENST00000581265 RER1O15258 196 aa8.87□□□□□ -0.99
RFFL-209ENST00000581265 NDUFB2O95178 105 aa8.87□□□□□ -0.99
RFFL-209ENST00000581265 ZNF682O95780 498 aa8.87□□□□□ -0.99
RFFL-209ENST00000581265 PLATP00750 562 aa8.87□□□□□ -0.99
RFFL-209ENST00000581265 DBHP09172 617 aa8.87□□□□□ -0.99
RFFL-209ENST00000581265 IGHV4-38-2P0DP08 117 aa8.87□□□□□ -0.99
RFFL-209ENST00000581265 SDHAP31040 664 aa8.87□□□□□ -0.99
RFFL-209ENST00000581265 SRP9P49458 86 aaKnown RBP8.87□□□□□ -0.99
RFFL-209ENST00000581265 LIPEQ05469 1076 aa8.87□□□□□ -0.99
RFFL-209ENST00000581265 DGCR6Q14129 220 aa8.87□□□□□ -0.99
RFFL-209ENST00000581265 RSPO1Q2MKA7 263 aaPredicted RBP8.87□□□□□ -0.99
RFFL-209ENST00000581265 OTPQ5XKR4 325 aa8.87□□□□□ -0.99
RFFL-209ENST00000581265 OR2T2Q6IF00 324 aa8.87□□□□□ -0.99
RFFL-209ENST00000581265 CGB2Q6NT52 195 aa8.87□□□□□ -0.99
RFFL-209ENST00000581265 LEG1Q6P5S2 330 aa8.87□□□□□ -0.99
RFFL-209ENST00000581265 BTNL3Q6UXE8 466 aa8.87□□□□□ -0.99
RFFL-209ENST00000581265 FKBP9P1Q75LS8 142 aa8.87□□□□□ -0.99
RFFL-209ENST00000581265 ARPINQ7Z6K5 226 aa8.87□□□□□ -0.99
RFFL-209ENST00000581265 ADCK1Q86TW2 530 aa8.87□□□□□ -0.99
RFFL-209ENST00000581265 OR5AS1Q8N127 324 aa8.87□□□□□ -0.99
RFFL-209ENST00000581265 PARP8Q8N3A8 854 aa8.87□□□□□ -0.99
RFFL-209ENST00000581265 GJC3Q8NFK1 279 aa8.87□□□□□ -0.99
RFFL-209ENST00000581265 RP9Q8TA86 221 aaKnown RBP8.87□□□□□ -0.99
RFFL-209ENST00000581265 PLEKHA8Q96JA3 519 aa8.87□□□□□ -0.99
RFFL-209ENST00000581265 MEGF10Q96KG7 1140 aa8.87□□□□□ -0.99
RFFL-209ENST00000581265 GPX7Q96SL4 187 aaPredicted RBP8.87□□□□□ -0.99
RFFL-209ENST00000581265 SLC30A2Q9BRI3 323 aa8.87□□□□□ -0.99
RFFL-209ENST00000581265 NUAK2Q9H093 628 aa8.87□□□□□ -0.99
RFFL-209ENST00000581265 SLITRK2Q9H156 845 aa8.87□□□□□ -0.99
RFFL-209ENST00000581265 PRDM13Q9H4Q3 707 aa8.87□□□□□ -0.99
RFFL-209ENST00000581265 UNKLQ9H9P5 680 aaKnown RBP8.87□□□□□ -0.99
RFFL-209ENST00000581265 FGFR1OP2Q9NVK5 253 aa8.87□□□□□ -0.99
RFFL-209ENST00000581265 GMPR2Q9P2T1 348 aaKnown RBP8.87□□□□□ -0.99
RFFL-209ENST00000581265 CAPN7Q9Y6W3 813 aa8.87□□□□□ -0.99
RFFL-209ENST00000581265 IGHV2-70DA0A0C4DH43 119 aa8.86□□□□□ -0.99
RFFL-209ENST00000581265 LRRC30A6NM36 301 aa8.86□□□□□ -0.99
RFFL-209ENST00000581265 IQCF6A8MYZ5 107 aa8.86□□□□□ -0.99
RFFL-209ENST00000581265 IMPA2O14732 288 aa8.86□□□□□ -0.99
RFFL-209ENST00000581265 ZNF205O95201 554 aa8.86□□□□□ -0.99
RFFL-209ENST00000581265 TXNDC12O95881 172 aa8.86□□□□□ -0.99
RFFL-209ENST00000581265 CYB5R3P00387 301 aaPredicted RBP8.86□□□□□ -0.99
RFFL-209ENST00000581265 RPS2P15880 293 aaKnown RBP8.86□□□□□ -0.99
RFFL-209ENST00000581265 GATA4P43694 442 aa8.86□□□□□ -0.99
RFFL-209ENST00000581265 GNB2P62879 340 aa8.86□□□□□ -0.99
RFFL-209ENST00000581265 KRR1Q13601 381 aaKnown RBP8.86□□□□□ -0.99
RFFL-209ENST00000581265 PGM2L1Q6PCE3 622 aa8.86□□□□□ -0.99
RFFL-209ENST00000581265 C16orf87Q6PH81 154 aa8.86□□□□□ -0.99
RFFL-209ENST00000581265 DPY19L2P2Q6ZN68 376 aa8.86□□□□□ -0.99
RFFL-209ENST00000581265 COLCA1Q6ZS62 124 aa8.86□□□□□ -0.99
RFFL-209ENST00000581265 PTCHD4Q6ZW05 846 aa8.86□□□□□ -0.99
RFFL-209ENST00000581265 CYP4Z1Q86W10 505 aa8.86□□□□□ -0.99
RFFL-209ENST00000581265 KLBQ86Z14 1044 aa8.86□□□□□ -0.99
RFFL-209ENST00000581265 POU5F2Q8N7G0 328 aa8.86□□□□□ -0.99
RFFL-209ENST00000581265 OR10AD1Q8NGE0 317 aa8.86□□□□□ -0.99
RFFL-209ENST00000581265 ZNF420Q8TAQ5 688 aaPredicted RBP8.86□□□□□ -0.99
RFFL-209ENST00000581265 RCN3Q96D15 328 aa8.86□□□□□ -0.99
RFFL-209ENST00000581265 NEIL1Q96FI4 390 aaPredicted RBP8.86□□□□□ -0.99
RFFL-209ENST00000581265 FAM46AQ96IP4 442 aaKnown RBP8.86□□□□□ -0.99
RFFL-209ENST00000581265 HSH2DQ96JZ2 352 aa8.86□□□□□ -0.99
RFFL-209ENST00000581265 COQ7Q99807 217 aa8.86□□□□□ -0.99
RFFL-209ENST00000581265 HOPXQ9BPY8 73 aaPredicted RBP8.86□□□□□ -0.99
RFFL-209ENST00000581265 TMEM246Q9BRR3 403 aa8.86□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms