RNA–Protein interactions for RNA: ENST00000580287.5

CDK5RAP3-217, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 1 (best)

Gene CDK5RAP3, Length 2,609 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-217ENST00000580287 MARVELD1Q9BSK0 173 aa11.28□□□□□ -0.6
CDK5RAP3-217ENST00000580287 CYSLTR2Q9NS75 346 aa11.28□□□□□ -0.6
CDK5RAP3-217ENST00000580287 NUDT15Q9NV35 164 aa11.28□□□□□ -0.6
CDK5RAP3-217ENST00000580287 ALKBH4Q9NXW9 302 aa11.28□□□□□ -0.6
CDK5RAP3-217ENST00000580287 LIPGQ9Y5X9 500 aa11.28□□□□□ -0.6
CDK5RAP3-217ENST00000580287 ZNF879B4DU55 563 aa11.27□□□□□ -0.6
CDK5RAP3-217ENST00000580287 SLC16A7O60669 478 aa11.27□□□□□ -0.6
CDK5RAP3-217ENST00000580287 FZD7O75084 574 aa11.27□□□□□ -0.6
CDK5RAP3-217ENST00000580287 SLC43A1O75387 559 aa11.27□□□□□ -0.6
CDK5RAP3-217ENST00000580287 TXNDC12O95881 172 aa11.27□□□□□ -0.6
CDK5RAP3-217ENST00000580287 EIF1AXP47813 144 aaKnown RBP11.27□□□□□ -0.6
CDK5RAP3-217ENST00000580287 RPL27P61353 136 aaKnown RBP11.27□□□□□ -0.6
CDK5RAP3-217ENST00000580287 PPIAP62937 165 aaKnown RBP11.27□□□□□ -0.6
CDK5RAP3-217ENST00000580287 HSF1Q00613 529 aa11.27□□□□□ -0.6
CDK5RAP3-217ENST00000580287 CARD17Q5XLA6 110 aa11.27□□□□□ -0.6
CDK5RAP3-217ENST00000580287 C1orf122Q6ZSJ8 110 aa11.27□□□□□ -0.6
CDK5RAP3-217ENST00000580287 GGNQ86UU5 652 aa11.27□□□□□ -0.6
CDK5RAP3-217ENST00000580287 TIGD4Q8IY51 512 aa11.27□□□□□ -0.6
CDK5RAP3-217ENST00000580287 EXD3Q8N9H8 876 aa11.27□□□□□ -0.6
CDK5RAP3-217ENST00000580287 ROBO4Q8WZ75 1007 aa11.27□□□□□ -0.6
CDK5RAP3-217ENST00000580287 MS4A3Q96HJ5 214 aa11.27□□□□□ -0.6
CDK5RAP3-217ENST00000580287 INTS14Q96SY0 518 aa11.27□□□□□ -0.6
CDK5RAP3-217ENST00000580287 TXNIPQ9H3M7 391 aa11.27□□□□□ -0.6
CDK5RAP3-217ENST00000580287 ZNF69Q9UC07 566 aa11.27□□□□□ -0.6
CDK5RAP3-217ENST00000580287 MRM2Q9UI43 246 aaKnown RBP11.27□□□□□ -0.6
CDK5RAP3-217ENST00000580287 ZNF281Q9Y2X9 895 aa11.27□□□□□ -0.6
CDK5RAP3-217ENST00000580287 MSRB2Q9Y3D2 182 aa11.27□□□□□ -0.6
CDK5RAP3-217ENST00000580287 IGKV1D-43A0A0B4J1Z2 117 aa11.27□□□□□ -0.61
CDK5RAP3-217ENST00000580287 ORC5O43913 435 aa11.27□□□□□ -0.61
CDK5RAP3-217ENST00000580287 EPXP11678 715 aa11.27□□□□□ -0.61
CDK5RAP3-217ENST00000580287 BTF3P20290 206 aaKnown RBP11.27□□□□□ -0.61
CDK5RAP3-217ENST00000580287 PITPNBP48739 271 aa11.27□□□□□ -0.61
CDK5RAP3-217ENST00000580287 GFRA1P56159 465 aa11.27□□□□□ -0.61
CDK5RAP3-217ENST00000580287 HES5Q5TA89 166 aa11.27□□□□□ -0.61
CDK5RAP3-217ENST00000580287 C5orf46Q6UWT4 87 aa11.27□□□□□ -0.61
CDK5RAP3-217ENST00000580287 OR8H1Q8NGG4 311 aa11.27□□□□□ -0.61
CDK5RAP3-217ENST00000580287 NSMAFQ92636 917 aa11.27□□□□□ -0.61
CDK5RAP3-217ENST00000580287 KLHL15Q96M94 604 aa11.27□□□□□ -0.61
CDK5RAP3-217ENST00000580287 AUNIPQ9H7T9 357 aa11.27□□□□□ -0.61
CDK5RAP3-217ENST00000580287 EIF3KQ9UBQ5 218 aaKnown RBP11.27□□□□□ -0.61
CDK5RAP3-217ENST00000580287 KCNG2Q9UJ96 466 aa11.27□□□□□ -0.61
CDK5RAP3-217ENST00000580287 TRAV1-2A0A0B4J238 106 aa11.26□□□□□ -0.61
CDK5RAP3-217ENST00000580287 CDK2AP1O14519 115 aa11.26□□□□□ -0.61
CDK5RAP3-217ENST00000580287 CXCL13O43927 109 aa11.26□□□□□ -0.61
CDK5RAP3-217ENST00000580287 GPRIN2O60269 458 aa11.26□□□□□ -0.61
CDK5RAP3-217ENST00000580287 GATBO75879 557 aaKnown RBP11.26□□□□□ -0.61
CDK5RAP3-217ENST00000580287 SCO1O75880 301 aa11.26□□□□□ -0.61
CDK5RAP3-217ENST00000580287 UCHL1P09936 223 aa11.26□□□□□ -0.61
CDK5RAP3-217ENST00000580287 SRMP19623 302 aa11.26□□□□□ -0.61
CDK5RAP3-217ENST00000580287 BTCP35070 178 aa11.26□□□□□ -0.61
CDK5RAP3-217ENST00000580287 MAP2K6P52564 334 aa11.26□□□□□ -0.61
CDK5RAP3-217ENST00000580287 BIDP55957 195 aa11.26□□□□□ -0.61
CDK5RAP3-217ENST00000580287 CAMK2DQ13557 499 aa11.26□□□□□ -0.61
CDK5RAP3-217ENST00000580287 FAM205BPQ63HN1 556 aa11.26□□□□□ -0.61
CDK5RAP3-217ENST00000580287 PLPP7Q8NBV4 271 aa11.26□□□□□ -0.61
CDK5RAP3-217ENST00000580287 OR5AK2Q8NH90 309 aa11.26□□□□□ -0.61
CDK5RAP3-217ENST00000580287 ZNF519Q8TB69 540 aa11.26□□□□□ -0.61
CDK5RAP3-217ENST00000580287 SLC25A43Q8WUT9 341 aaPredicted RBP11.26□□□□□ -0.61
CDK5RAP3-217ENST00000580287 AKAP1Q92667 903 aaKnown RBP eCLIP11.26□□□□□ -0.61
CDK5RAP3-217ENST00000580287 RFT1Q96AA3 541 aa11.26□□□□□ -0.61
CDK5RAP3-217ENST00000580287 B3GALT5Q9Y2C3 310 aa11.26□□□□□ -0.61
CDK5RAP3-217ENST00000580287 KLF13Q9Y2Y9 288 aaPredicted RBP11.26□□□□□ -0.61
CDK5RAP3-217ENST00000580287 HDGFL3Q9Y3E1 203 aa11.26□□□□□ -0.61
CDK5RAP3-217ENST00000580287 PTPRQQ9UMZ3 2332 aa11.26□□□□□ -0.61
CDK5RAP3-217ENST00000580287 A0A0A6YYJ9 748 aa11.26□□□□□ -0.61
CDK5RAP3-217ENST00000580287 NPIPA5E9PKD4 350 aa11.26□□□□□ -0.61
CDK5RAP3-217ENST00000580287 KLRC4-KLRK1H3BQV0 150 aa11.26□□□□□ -0.61
CDK5RAP3-217ENST00000580287 MPZL1O95297 269 aa11.26□□□□□ -0.61
CDK5RAP3-217ENST00000580287 SPARCP09486 303 aa11.26□□□□□ -0.61
CDK5RAP3-217ENST00000580287 CTLA4P16410 223 aa11.26□□□□□ -0.61
CDK5RAP3-217ENST00000580287 POU3F2P20265 443 aaPredicted RBP11.26□□□□□ -0.61
CDK5RAP3-217ENST00000580287 NPR2P20594 1047 aa11.26□□□□□ -0.61
CDK5RAP3-217ENST00000580287 ZBTB37Q5TC79 503 aa11.26□□□□□ -0.61
CDK5RAP3-217ENST00000580287 EEF1A1P5Q5VTE0 462 aa11.26□□□□□ -0.61
CDK5RAP3-217ENST00000580287 CDC20BQ86Y33 519 aa11.26□□□□□ -0.61
CDK5RAP3-217ENST00000580287 ZNF676Q8N7Q3 588 aa11.26□□□□□ -0.61
CDK5RAP3-217ENST00000580287 MARVELD3Q96A59 401 aa11.26□□□□□ -0.61
CDK5RAP3-217ENST00000580287 PHF21AQ96BD5 680 aa11.26□□□□□ -0.61
CDK5RAP3-217ENST00000580287 HYLS1Q96M11 299 aa11.26□□□□□ -0.61
CDK5RAP3-217ENST00000580287 GLTPQ9NZD2 209 aa11.26□□□□□ -0.61
CDK5RAP3-217ENST00000580287 NPIPA1Q9UND3 350 aa11.26□□□□□ -0.61
CDK5RAP3-217ENST00000580287 SVILO95425 2214 aa11.26□□□□□ -0.61
CDK5RAP3-217ENST00000580287 PRSS37A4D1T9 235 aa11.25□□□□□ -0.61
CDK5RAP3-217ENST00000580287 ZNF593O00488 134 aaPredicted RBP11.25□□□□□ -0.61
CDK5RAP3-217ENST00000580287 MT-ND4P03905 459 aa11.25□□□□□ -0.61
CDK5RAP3-217ENST00000580287 FCER2P06734 321 aa11.25□□□□□ -0.61
CDK5RAP3-217ENST00000580287 ZNF17P17021 662 aa11.25□□□□□ -0.61
CDK5RAP3-217ENST00000580287 H3F3AP84243 136 aa11.25□□□□□ -0.61
CDK5RAP3-217ENST00000580287 MEP1BQ16820 701 aa11.25□□□□□ -0.61
CDK5RAP3-217ENST00000580287 LRRN1Q6UXK5 716 aa11.25□□□□□ -0.61
CDK5RAP3-217ENST00000580287 OR10D3Q8NH80 312 aa11.25□□□□□ -0.61
CDK5RAP3-217ENST00000580287 RGP1Q92546 391 aaPredicted RBP11.25□□□□□ -0.61
CDK5RAP3-217ENST00000580287 CCDC120Q96HB5 630 aa11.25□□□□□ -0.61
CDK5RAP3-217ENST00000580287 ZNF385AQ96PM9 386 aaKnown RBP11.25□□□□□ -0.61
CDK5RAP3-217ENST00000580287 AMELYQ99218 206 aa11.25□□□□□ -0.61
CDK5RAP3-217ENST00000580287 NKIRAS2Q9NYR9 191 aa11.25□□□□□ -0.61
CDK5RAP3-217ENST00000580287 FRRS1LQ9P0K9 344 aa11.25□□□□□ -0.61
CDK5RAP3-217ENST00000580287 TNRC6AQ8NDV7 1962 aaKnown RBP11.25□□□□□ -0.61
CDK5RAP3-217ENST00000580287 PIN1P1O15428 100 aa11.25□□□□□ -0.61
CDK5RAP3-217ENST00000580287 GLSO94925 669 aaPredicted RBP11.25□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms