RNA–Protein interactions for RNA: ENST00000580170.5

PTPRM-211, Transcript of protein tyrosine phosphatase, receptor type M, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTPRM, Length 5,941 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRM-211ENST00000580170 RAB35Q15286 201 aa19.44■□□□□ 0.7
PTPRM-211ENST00000580170 SH2D5Q6ZV89 423 aa19.44■□□□□ 0.7
PTPRM-211ENST00000580170 MTCH1Q9NZJ7 389 aa19.44■□□□□ 0.7
PTPRM-211ENST00000580170 CTSFQ9UBX1 484 aa19.44■□□□□ 0.7
PTPRM-211ENST00000580170 MN1Q10571 1320 aaPredicted RBP19.44■□□□□ 0.7
PTPRM-211ENST00000580170 ARRDC5A6NEK1 342 aa19.44■□□□□ 0.7
PTPRM-211ENST00000580170 PHOX2AO14813 284 aa19.44■□□□□ 0.7
PTPRM-211ENST00000580170 METTL15P1P0C7V9 234 aa19.44■□□□□ 0.7
PTPRM-211ENST00000580170 CD22P20273 847 aa19.44■□□□□ 0.7
PTPRM-211ENST00000580170 UBE2MP61081 183 aaKnown RBP19.44■□□□□ 0.7
PTPRM-211ENST00000580170 LANCL2Q9NS86 450 aa19.44■□□□□ 0.7
PTPRM-211ENST00000580170 GAR1Q9NY12 217 aaKnown RBP19.44■□□□□ 0.7
PTPRM-211ENST00000580170 LOC101059915A0A1B0GWI6 518 aaPredicted RBP19.44■□□□□ 0.7
PTPRM-211ENST00000580170 TAAR5O14804 337 aa19.44■□□□□ 0.7
PTPRM-211ENST00000580170 TCN2P20062 427 aa19.44■□□□□ 0.7
PTPRM-211ENST00000580170 CLDN20P56880 219 aa19.44■□□□□ 0.7
PTPRM-211ENST00000580170 GLCCI1Q86VQ1 547 aa19.44■□□□□ 0.7
PTPRM-211ENST00000580170 FAM103A1Q9BTL3 118 aaKnown RBP19.44■□□□□ 0.7
PTPRM-211ENST00000580170 ICOSLGO75144 302 aa19.43■□□□□ 0.7
PTPRM-211ENST00000580170 RPL18Q07020 188 aaKnown RBP19.43■□□□□ 0.7
PTPRM-211ENST00000580170 ASB16Q96NS5 453 aa19.43■□□□□ 0.7
PTPRM-211ENST00000580170 KIR2DS1A0A191URI9 304 aa19.43■□□□□ 0.7
PTPRM-211ENST00000580170 YKT6O15498 198 aa19.43■□□□□ 0.7
PTPRM-211ENST00000580170 KIR2DS4P43632 304 aa19.43■□□□□ 0.7
PTPRM-211ENST00000580170 EMP3P54852 163 aa19.43■□□□□ 0.7
PTPRM-211ENST00000580170 KIR2DS1Q14954 304 aa19.43■□□□□ 0.7
PTPRM-211ENST00000580170 ETFRF1Q6IPR1 90 aa19.43■□□□□ 0.7
PTPRM-211ENST00000580170 PRRT4C9JH25 899 aa19.43■□□□□ 0.7
PTPRM-211ENST00000580170 ETHE1O95571 254 aa19.43■□□□□ 0.7
PTPRM-211ENST00000580170 OR10J4P0C629 311 aa19.43■□□□□ 0.7
PTPRM-211ENST00000580170 ACKR3P25106 362 aa19.43■□□□□ 0.7
PTPRM-211ENST00000580170 ARRB2P32121 409 aa19.43■□□□□ 0.7
PTPRM-211ENST00000580170 EGR3Q06889 387 aa19.43■□□□□ 0.7
PTPRM-211ENST00000580170 TCTN3Q6NUS6 607 aa19.43■□□□□ 0.7
PTPRM-211ENST00000580170 MOB1AQ9H8S9 216 aa19.43■□□□□ 0.7
PTPRM-211ENST00000580170 AK3Q9UIJ7 227 aa19.43■□□□□ 0.7
PTPRM-211ENST00000580170 SSUH2Q9Y2M2 353 aa19.43■□□□□ 0.7
PTPRM-211ENST00000580170 V9GYS6 101 aa19.43■□□□□ 0.7
PTPRM-211ENST00000580170 ZNF891A8MT65 544 aaPredicted RBP19.43■□□□□ 0.7
PTPRM-211ENST00000580170 EVX1P49640 407 aa19.43■□□□□ 0.7
PTPRM-211ENST00000580170 H3F3AP84243 136 aa19.43■□□□□ 0.7
PTPRM-211ENST00000580170 PLXDC2Q6UX71 529 aa19.43■□□□□ 0.7
PTPRM-211ENST00000580170 MYEOVQ96EZ4 313 aa19.43■□□□□ 0.7
PTPRM-211ENST00000580170 RTL8AQ9BWD3 113 aa19.43■□□□□ 0.7
PTPRM-211ENST00000580170 ISG20L2Q9H9L3 353 aaKnown RBP19.43■□□□□ 0.7
PTPRM-211ENST00000580170 PDGFBP01127 241 aaPredicted RBP19.43■□□□□ 0.7
PTPRM-211ENST00000580170 EMDP50402 254 aa19.43■□□□□ 0.7
PTPRM-211ENST00000580170 C4orf17Q53FE4 359 aa19.43■□□□□ 0.7
PTPRM-211ENST00000580170 ASTLQ6HA08 431 aaPredicted RBP19.43■□□□□ 0.7
PTPRM-211ENST00000580170 TFAP2EQ6VUC0 442 aa19.43■□□□□ 0.7
PTPRM-211ENST00000580170 OR51F2Q8NH61 342 aa19.43■□□□□ 0.7
PTPRM-211ENST00000580170 BAHD1Q8TBE0 780 aaPredicted RBP19.43■□□□□ 0.7
PTPRM-211ENST00000580170 PATE1Q8WXA2 126 aa19.43■□□□□ 0.7
PTPRM-211ENST00000580170 TMEM18Q96B42 140 aa19.43■□□□□ 0.7
PTPRM-211ENST00000580170 ELSPBP1Q96BH3 223 aa19.43■□□□□ 0.7
PTPRM-211ENST00000580170 ANKRD36CQ5JPF3 1778 aa19.42■□□□□ 0.7
PTPRM-211ENST00000580170 CCL11P51671 97 aa19.42■□□□□ 0.7
PTPRM-211ENST00000580170 SCCPDHQ8NBX0 429 aa19.42■□□□□ 0.7
PTPRM-211ENST00000580170 TOLLIPQ9H0E2 274 aa19.42■□□□□ 0.7
PTPRM-211ENST00000580170 ZNF331Q9NQX6 463 aaPredicted RBP19.42■□□□□ 0.7
PTPRM-211ENST00000580170 FABP1P07148 127 aa19.42■□□□□ 0.7
PTPRM-211ENST00000580170 SYS1Q8N2H4 156 aa19.42■□□□□ 0.7
PTPRM-211ENST00000580170 ARIH2OSQ8N7S6 290 aa19.42■□□□□ 0.7
PTPRM-211ENST00000580170 NECAP1Q8NC96 275 aa19.42■□□□□ 0.7
PTPRM-211ENST00000580170 SMIM19Q96E16 107 aa19.42■□□□□ 0.7
PTPRM-211ENST00000580170 REEP6Q96HR9 211 aa19.42■□□□□ 0.7
PTPRM-211ENST00000580170 AKIP1Q9NQ31 210 aa19.42■□□□□ 0.7
PTPRM-211ENST00000580170 CACNA1SQ13698 1873 aa19.42■□□□□ 0.7
PTPRM-211ENST00000580170 NRG2O14511 850 aaPredicted RBP19.42■□□□□ 0.7
PTPRM-211ENST00000580170 TMEM11P17152 192 aa19.42■□□□□ 0.7
PTPRM-211ENST00000580170 OPA3Q9H6K4 179 aa19.42■□□□□ 0.7
PTPRM-211ENST00000580170 TMEM30AQ9NV96 361 aa19.42■□□□□ 0.7
PTPRM-211ENST00000580170 ZNF586Q9NXT0 402 aa19.42■□□□□ 0.7
PTPRM-211ENST00000580170 PKD1L3Q7Z443 1732 aa19.42■□□□□ 0.7
PTPRM-211ENST00000580170 ZNF816-ZNF321PA0A0X1KG74 233 aa19.42■□□□□ 0.7
PTPRM-211ENST00000580170 TPOP07202 933 aa19.42■□□□□ 0.7
PTPRM-211ENST00000580170 FKBP2P26885 142 aaKnown RBP19.42■□□□□ 0.7
PTPRM-211ENST00000580170 SUMO1P63165 101 aaKnown RBP19.42■□□□□ 0.7
PTPRM-211ENST00000580170 Q6ZRG5 221 aa19.42■□□□□ 0.7
PTPRM-211ENST00000580170 YRDCQ86U90 279 aaKnown RBP19.42■□□□□ 0.7
PTPRM-211ENST00000580170 ZNF321PQ8N8H1 164 aa19.42■□□□□ 0.7
PTPRM-211ENST00000580170 MED9Q9NWA0 146 aa19.42■□□□□ 0.7
PTPRM-211ENST00000580170 SLCO1B1Q9Y6L6 691 aa19.42■□□□□ 0.7
PTPRM-211ENST00000580170 FAM166BA8MTA8 275 aa19.41■□□□□ 0.7
PTPRM-211ENST00000580170 AQP7O14520 342 aa19.41■□□□□ 0.7
PTPRM-211ENST00000580170 HAGHQ16775 308 aa19.41■□□□□ 0.7
PTPRM-211ENST00000580170 PRSS42Q7Z5A4 293 aa19.41■□□□□ 0.7
PTPRM-211ENST00000580170 ZNF251Q9BRH9 671 aa19.41■□□□□ 0.7
PTPRM-211ENST00000580170 BTBD17A6NE02 478 aa19.41■□□□□ 0.7
PTPRM-211ENST00000580170 C4orf47A7E2U8 309 aa19.41■□□□□ 0.7
PTPRM-211ENST00000580170 IL3RAP26951 378 aa19.41■□□□□ 0.7
PTPRM-211ENST00000580170 GSK3AP49840 483 aa19.41■□□□□ 0.7
PTPRM-211ENST00000580170 BTG2P78543 158 aa19.41■□□□□ 0.7
PTPRM-211ENST00000580170 THEM4Q5T1C6 240 aa19.41■□□□□ 0.7
PTPRM-211ENST00000580170 THOC3Q96J01 351 aaKnown RBP19.41■□□□□ 0.7
PTPRM-211ENST00000580170 BCL2L10Q9HD36 194 aa19.41■□□□□ 0.7
PTPRM-211ENST00000580170 FLVCR1Q9Y5Y0 555 aa19.41■□□□□ 0.7
PTPRM-211ENST00000580170 CCDC74AQ96AQ1 378 aa19.41■□□□□ 0.7
PTPRM-211ENST00000580170 SAT2Q96F10 170 aaPredicted RBP19.41■□□□□ 0.7
PTPRM-211ENST00000580170 TRAF3IP2O43734 574 aaPredicted RBP19.41■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms