RNA–Protein interactions for RNA: ENST00000579640.5

SS18-213, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 2

Gene SS18, Length 1,840 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-213ENST00000579640 ZNF774Q6NX45 483 aa9.37□□□□□ -0.91
SS18-213ENST00000579640 ZNF544Q6NX49 715 aa9.37□□□□□ -0.91
SS18-213ENST00000579640 SPATC1Q76KD6 591 aa9.37□□□□□ -0.91
SS18-213ENST00000579640 ZNF808Q8N4W9 903 aaPredicted RBP9.37□□□□□ -0.91
SS18-213ENST00000579640 FAM169BQ8N8A8 192 aa9.37□□□□□ -0.91
SS18-213ENST00000579640 WDR31Q8NA23 367 aa9.37□□□□□ -0.91
SS18-213ENST00000579640 OR1F12Q8NHA8 337 aa9.37□□□□□ -0.91
SS18-213ENST00000579640 SPTSSAQ969W0 71 aa9.37□□□□□ -0.91
SS18-213ENST00000579640 S100PBPQ96BU1 408 aa9.37□□□□□ -0.91
SS18-213ENST00000579640 MUCL1Q96DR8 90 aa9.37□□□□□ -0.91
SS18-213ENST00000579640 PELI1Q96FA3 418 aa9.37□□□□□ -0.91
SS18-213ENST00000579640 OR5M11Q96RB7 305 aa9.37□□□□□ -0.91
SS18-213ENST00000579640 MGLLQ99685 303 aa9.37□□□□□ -0.91
SS18-213ENST00000579640 KCNJ15Q99712 375 aa9.37□□□□□ -0.91
SS18-213ENST00000579640 ACTR6Q9GZN1 396 aa9.37□□□□□ -0.91
SS18-213ENST00000579640 ISG20L2Q9H9L3 353 aaKnown RBP9.37□□□□□ -0.91
SS18-213ENST00000579640 KCNJ16Q9NPI9 418 aa9.37□□□□□ -0.91
SS18-213ENST00000579640 LRP12Q9Y561 859 aa9.37□□□□□ -0.91
SS18-213ENST00000579640 KALRNO60229 2985 aa9.36□□□□□ -0.91
SS18-213ENST00000579640 FAM90A27PA6NNH2 459 aa9.36□□□□□ -0.91
SS18-213ENST00000579640 PSMD9O00233 223 aa9.36□□□□□ -0.91
SS18-213ENST00000579640 MAGEB4O15481 346 aaPredicted RBP9.36□□□□□ -0.91
SS18-213ENST00000579640 TFAP2AP05549 437 aa9.36□□□□□ -0.91
SS18-213ENST00000579640 PSMB9P28065 219 aa9.36□□□□□ -0.91
SS18-213ENST00000579640 HTR5AP47898 357 aa9.36□□□□□ -0.91
SS18-213ENST00000579640 ALDH3B2P48448 385 aa9.36□□□□□ -0.91
SS18-213ENST00000579640 TGM4P49221 684 aa9.36□□□□□ -0.91
SS18-213ENST00000579640 TIGD6Q17RP2 521 aa9.36□□□□□ -0.91
SS18-213ENST00000579640 LIPNQ5VXI9 398 aa9.36□□□□□ -0.91
SS18-213ENST00000579640 FDX2Q6P4F2 183 aa9.36□□□□□ -0.91
SS18-213ENST00000579640 MDP1Q86V88 176 aa9.36□□□□□ -0.91
SS18-213ENST00000579640 KLBQ86Z14 1044 aa9.36□□□□□ -0.91
SS18-213ENST00000579640 AKR7LQ8NHP1 331 aa9.36□□□□□ -0.91
SS18-213ENST00000579640 HSD17B8Q92506 261 aa9.36□□□□□ -0.91
SS18-213ENST00000579640 ACOXLQ9NUZ1 547 aa9.36□□□□□ -0.91
SS18-213ENST00000579640 SLC25A15Q9Y619 301 aa9.36□□□□□ -0.91
SS18-213ENST00000579640 ZNF503-AS2A6NEH8 195 aa9.35□□□□□ -0.91
SS18-213ENST00000579640 ACOD1A6NK06 481 aa9.35□□□□□ -0.91
SS18-213ENST00000579640 INMTO95050 263 aa9.35□□□□□ -0.91
SS18-213ENST00000579640 CLDN14O95500 239 aa9.35□□□□□ -0.91
SS18-213ENST00000579640 SERPINA5P05154 406 aa9.35□□□□□ -0.91
SS18-213ENST00000579640 HSMCR30P0CW71 290 aa9.35□□□□□ -0.91
SS18-213ENST00000579640 CRYGSP22914 178 aa9.35□□□□□ -0.91
SS18-213ENST00000579640 OTX1P32242 354 aaPredicted RBP9.35□□□□□ -0.91
SS18-213ENST00000579640 MMP16P51512 607 aa9.35□□□□□ -0.91
SS18-213ENST00000579640 TPTEP56180 551 aa9.35□□□□□ -0.91
SS18-213ENST00000579640 PSMA6P60900 246 aaKnown RBP9.35□□□□□ -0.91
SS18-213ENST00000579640 TUBA1BP68363 451 aa9.35□□□□□ -0.91
SS18-213ENST00000579640 SORDQ00796 357 aa9.35□□□□□ -0.91
SS18-213ENST00000579640 GPR50Q13585 617 aa9.35□□□□□ -0.91
SS18-213ENST00000579640 BLMHQ13867 455 aa9.35□□□□□ -0.91
SS18-213ENST00000579640 KRTAP27-1Q3LI81 207 aa9.35□□□□□ -0.91
SS18-213ENST00000579640 C3orf36Q3SXR2 165 aa9.35□□□□□ -0.91
SS18-213ENST00000579640 ARMCX4Q5H9R4 360 aa9.35□□□□□ -0.91
SS18-213ENST00000579640 RPL22L1Q6P5R6 122 aaKnown RBP9.35□□□□□ -0.91
SS18-213ENST00000579640 TUBA1AQ71U36 451 aa9.35□□□□□ -0.91
SS18-213ENST00000579640 DCLRE1CQ96SD1 692 aaKnown RBP9.35□□□□□ -0.91
SS18-213ENST00000579640 MOB1AQ9H8S9 216 aa9.35□□□□□ -0.91
SS18-213ENST00000579640 SP140LQ9H930 580 aa9.35□□□□□ -0.91
SS18-213ENST00000579640 NOX3Q9HBY0 568 aa9.35□□□□□ -0.91
SS18-213ENST00000579640 CRNNQ9UBG3 495 aaPredicted RBP9.35□□□□□ -0.91
SS18-213ENST00000579640 R4GMQ9 66 aa9.35□□□□□ -0.91
SS18-213ENST00000579640 PCNX1Q96RV3 2341 aa9.35□□□□□ -0.91
SS18-213ENST00000579640 CACNA1CQ13936 2221 aa9.35□□□□□ -0.91
SS18-213ENST00000579640 CFAP46Q8IYW2 2715 aa9.35□□□□□ -0.91
SS18-213ENST00000579640 RPP14O95059 124 aaKnown RBP9.35□□□□□ -0.91
SS18-213ENST00000579640 IGKV3-15P01624 115 aa9.35□□□□□ -0.91
SS18-213ENST00000579640 STOMP27105 288 aa9.35□□□□□ -0.91
SS18-213ENST00000579640 CCKARP32238 428 aa9.35□□□□□ -0.91
SS18-213ENST00000579640 TTKP33981 857 aa9.35□□□□□ -0.91
SS18-213ENST00000579640 APLNRP35414 380 aa9.35□□□□□ -0.91
SS18-213ENST00000579640 CCR9P51686 369 aa9.35□□□□□ -0.91
SS18-213ENST00000579640 TPBGQ13641 420 aa9.35□□□□□ -0.91
SS18-213ENST00000579640 RAB39AQ14964 217 aa9.35□□□□□ -0.91
SS18-213ENST00000579640 PPA1Q15181 289 aa9.35□□□□□ -0.91
SS18-213ENST00000579640 DRAM2Q6UX65 266 aa9.35□□□□□ -0.91
SS18-213ENST00000579640 ZNF283Q8N7M2 679 aa9.35□□□□□ -0.91
SS18-213ENST00000579640 CPEB3Q8NE35 698 aaKnown RBP9.35□□□□□ -0.91
SS18-213ENST00000579640 OR1J2Q8NGS2 313 aa9.35□□□□□ -0.91
SS18-213ENST00000579640 ITLN2Q8WWU7 325 aaPredicted RBP9.35□□□□□ -0.91
SS18-213ENST00000579640 UFD1Q92890 307 aa9.35□□□□□ -0.91
SS18-213ENST00000579640 ZNF75AQ96N20 296 aa9.35□□□□□ -0.91
SS18-213ENST00000579640 OPALINQ96PE5 141 aa9.35□□□□□ -0.91
SS18-213ENST00000579640 DOK1Q99704 481 aa9.35□□□□□ -0.91
SS18-213ENST00000579640 HIVEP3Q5T1R4 2406 aa9.34□□□□□ -0.91
SS18-213ENST00000579640 TMEM269A0A1B0GVZ9 245 aa9.34□□□□□ -0.91
SS18-213ENST00000579640 A0A1W2PR80 420 aa9.34□□□□□ -0.91
SS18-213ENST00000579640 M0R135 149 aa9.34□□□□□ -0.91
SS18-213ENST00000579640 OGG1O15527 345 aa9.34□□□□□ -0.91
SS18-213ENST00000579640 ZG16O60844 167 aa9.34□□□□□ -0.91
SS18-213ENST00000579640 SRSF10O75494 262 aaKnown RBP9.34□□□□□ -0.91
SS18-213ENST00000579640 LALBAP00709 142 aa9.34□□□□□ -0.91
SS18-213ENST00000579640 CD1AP06126 327 aa9.34□□□□□ -0.91
SS18-213ENST00000579640 CPEP16870 476 aa9.34□□□□□ -0.91
SS18-213ENST00000579640 ZNF14P17017 642 aaPredicted RBP9.34□□□□□ -0.91
SS18-213ENST00000579640 CD53P19397 219 aa9.34□□□□□ -0.91
SS18-213ENST00000579640 CX3CR1P49238 355 aa9.34□□□□□ -0.91
SS18-213ENST00000579640 GDI2P50395 445 aaKnown RBP9.34□□□□□ -0.91
SS18-213ENST00000579640 GP2P55259 537 aaKnown RBP9.34□□□□□ -0.91
SS18-213ENST00000579640 ALKBH1Q13686 389 aaKnown RBP9.34□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 44.2 ms