RNA–Protein interactions for RNA: ENST00000578987.1

NUP85-209, Transcript of nucleoporin 85, humanhuman

TSL 3

Gene NUP85, Length 388 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP85-209ENST00000578987 SIAEQ9HAT2 523 aa3.24□□□□□ -1.89
NUP85-209ENST00000578987 DCAF13Q9NV06 445 aaKnown RBP3.24□□□□□ -1.89
NUP85-209ENST00000578987 RHCGQ9UBD6 479 aa3.24□□□□□ -1.89
NUP85-209ENST00000578987 MAGEL2Q9UJ55 1249 aa3.24□□□□□ -1.89
NUP85-209ENST00000578987 ZNF229Q9UJW7 825 aa3.24□□□□□ -1.89
NUP85-209ENST00000578987 RPS6KA6Q9UK32 745 aa3.24□□□□□ -1.89
NUP85-209ENST00000578987 ADAM30Q9UKF2 790 aa3.24□□□□□ -1.89
NUP85-209ENST00000578987 FBXL3Q9UKT7 428 aa3.24□□□□□ -1.89
NUP85-209ENST00000578987 NUP50Q9UKX7 468 aa3.24□□□□□ -1.89
NUP85-209ENST00000578987 STARD10Q9Y365 291 aa3.24□□□□□ -1.89
NUP85-209ENST00000578987 SNX13Q9Y5W8 968 aa3.24□□□□□ -1.89
NUP85-209ENST00000578987 NPTNQ9Y639 398 aa3.24□□□□□ -1.89
NUP85-209ENST00000578987 TENM1Q9UKZ4 2725 aa3.23□□□□□ -1.89
NUP85-209ENST00000578987 TRAV27A0A087WT01 109 aa3.23□□□□□ -1.89
NUP85-209ENST00000578987 HTR3EA5X5Y0 456 aa3.23□□□□□ -1.89
NUP85-209ENST00000578987 AQP12BA6NM10 295 aa3.23□□□□□ -1.89
NUP85-209ENST00000578987 J3QLI3 93 aa3.23□□□□□ -1.89
NUP85-209ENST00000578987 TBX1O43435 398 aa3.23□□□□□ -1.89
NUP85-209ENST00000578987 FOXH1O75593 365 aa3.23□□□□□ -1.89
NUP85-209ENST00000578987 CYB5R3P00387 301 aaPredicted RBP3.23□□□□□ -1.89
NUP85-209ENST00000578987 SERPINA1P01009 418 aa3.23□□□□□ -1.89
NUP85-209ENST00000578987 FSHBP01225 129 aa3.23□□□□□ -1.89
NUP85-209ENST00000578987 MT-ND5P03915 603 aa3.23□□□□□ -1.89
NUP85-209ENST00000578987 DBHP09172 617 aa3.23□□□□□ -1.89
NUP85-209ENST00000578987 GSTP1P09211 210 aaKnown RBP3.23□□□□□ -1.89
NUP85-209ENST00000578987 WNT2P09544 360 aa3.23□□□□□ -1.89
NUP85-209ENST00000578987 IGHV4-38-2P0DP08 117 aa3.23□□□□□ -1.89
NUP85-209ENST00000578987 THRBP10828 461 aa3.23□□□□□ -1.89
NUP85-209ENST00000578987 IFI30P13284 250 aa3.23□□□□□ -1.89
NUP85-209ENST00000578987 SELEP16581 610 aa3.23□□□□□ -1.89
NUP85-209ENST00000578987 ZNF12P17014 697 aa3.23□□□□□ -1.89
NUP85-209ENST00000578987 MDKP21741 143 aaPredicted RBP3.23□□□□□ -1.89
NUP85-209ENST00000578987 PRTN3P24158 256 aa3.23□□□□□ -1.89
NUP85-209ENST00000578987 IFNA8P32881 189 aa3.23□□□□□ -1.89
NUP85-209ENST00000578987 CD80P33681 288 aa3.23□□□□□ -1.89
NUP85-209ENST00000578987 LIMS1P48059 325 aa3.23□□□□□ -1.89
NUP85-209ENST00000578987 SLC6A9P48067 706 aa3.23□□□□□ -1.89
NUP85-209ENST00000578987 DAP3P51398 398 aaKnown RBP3.23□□□□□ -1.89
NUP85-209ENST00000578987 ZNF133P52736 654 aaPredicted RBP3.23□□□□□ -1.89
NUP85-209ENST00000578987 RPL27P61353 136 aaKnown RBP3.23□□□□□ -1.89
NUP85-209ENST00000578987 HOXA4Q00056 320 aaPredicted RBP3.23□□□□□ -1.89
NUP85-209ENST00000578987 FOXL1Q12952 345 aa3.23□□□□□ -1.89
NUP85-209ENST00000578987 ZNF154Q13106 437 aa3.23□□□□□ -1.89
NUP85-209ENST00000578987 SCGB2A2Q13296 93 aa3.23□□□□□ -1.89
NUP85-209ENST00000578987 CDK5R2Q13319 367 aa3.23□□□□□ -1.89
NUP85-209ENST00000578987 ENDOGQ14249 297 aaKnown RBP3.23□□□□□ -1.89
NUP85-209ENST00000578987 HLXQ14774 488 aaPredicted RBP3.23□□□□□ -1.89
NUP85-209ENST00000578987 CYBRD1Q53TN4 286 aa3.23□□□□□ -1.89
NUP85-209ENST00000578987 ALG10Q5BKT4 473 aa3.23□□□□□ -1.89
NUP85-209ENST00000578987 ARMCX4Q5H9R4 360 aa3.23□□□□□ -1.89
NUP85-209ENST00000578987 MTX3Q5HYI7 312 aa3.23□□□□□ -1.89
NUP85-209ENST00000578987 C10orf128Q5T292 105 aa3.23□□□□□ -1.89
NUP85-209ENST00000578987 FAM27BQ5VT28 67 aa3.23□□□□□ -1.89
NUP85-209ENST00000578987 MBNL2Q5VZF2 373 aaKnown RBP3.23□□□□□ -1.89
NUP85-209ENST00000578987 LCN8Q6JVE9 175 aa3.23□□□□□ -1.89
NUP85-209ENST00000578987 LYPD2Q6UXB3 125 aa3.23□□□□□ -1.89
NUP85-209ENST00000578987 BRD3OSQ6XYD6 125 aa3.23□□□□□ -1.89
NUP85-209ENST00000578987 ZSCAN2Q7Z7L9 614 aaPredicted RBP3.23□□□□□ -1.89
NUP85-209ENST00000578987 NAA40Q86UY6 237 aa3.23□□□□□ -1.89
NUP85-209ENST00000578987 LRRC28Q86X40 367 aaPredicted RBP3.23□□□□□ -1.89
NUP85-209ENST00000578987 DHFR2Q86XF0 187 aa3.23□□□□□ -1.89
NUP85-209ENST00000578987 AQP12AQ8IXF9 295 aa3.23□□□□□ -1.89
NUP85-209ENST00000578987 RNF148Q8N7C7 305 aa3.23□□□□□ -1.89
NUP85-209ENST00000578987 ATG16L2Q8NAA4 619 aa3.23□□□□□ -1.89
NUP85-209ENST00000578987 DEFB108BQ8NET1 73 aa3.23□□□□□ -1.89
NUP85-209ENST00000578987 MCUR1Q96AQ8 359 aa3.23□□□□□ -1.89
NUP85-209ENST00000578987 ELMOD3Q96FG2 381 aa3.23□□□□□ -1.89
NUP85-209ENST00000578987 TIMD4Q96H15 378 aa3.23□□□□□ -1.89
NUP85-209ENST00000578987 C7orf34Q96L11 122 aa3.23□□□□□ -1.89
NUP85-209ENST00000578987 Q96M85 177 aa3.23□□□□□ -1.89
NUP85-209ENST00000578987 NSMCE2Q96MF7 247 aa3.23□□□□□ -1.89
NUP85-209ENST00000578987 RBP7Q96R05 134 aa3.23□□□□□ -1.89
NUP85-209ENST00000578987 JMJD8Q96S16 334 aa3.23□□□□□ -1.89
NUP85-209ENST00000578987 NUDT16L1Q9BRJ7 211 aaKnown RBP3.23□□□□□ -1.89
NUP85-209ENST00000578987 ZNF426Q9BUY5 554 aa3.23□□□□□ -1.89
NUP85-209ENST00000578987 OR2H1Q9GZK4 316 aa3.23□□□□□ -1.89
NUP85-209ENST00000578987 EGLN1Q9GZT9 426 aa3.23□□□□□ -1.89
NUP85-209ENST00000578987 MS4A7Q9GZW8 240 aaPredicted RBP3.23□□□□□ -1.89
NUP85-209ENST00000578987 C1orf198Q9H425 327 aa3.23□□□□□ -1.89
NUP85-209ENST00000578987 WDR76Q9H967 626 aa3.23□□□□□ -1.89
NUP85-209ENST00000578987 ELOVL3Q9HB03 270 aa3.23□□□□□ -1.89
NUP85-209ENST00000578987 PATZ1Q9HBE1 687 aaKnown RBP3.23□□□□□ -1.89
NUP85-209ENST00000578987 IL1RAPQ9NPH3 570 aa3.23□□□□□ -1.89
NUP85-209ENST00000578987 TMEM106BQ9NUM4 274 aa3.23□□□□□ -1.89
NUP85-209ENST00000578987 PTTG3PQ9NZH4 202 aa3.23□□□□□ -1.89
NUP85-209ENST00000578987 PURGQ9UJV8 347 aaKnown RBP3.23□□□□□ -1.89
NUP85-209ENST00000578987 ZDHHC8Q9ULC8 765 aa3.23□□□□□ -1.89
NUP85-209ENST00000578987 SAMD4AQ9UPU9 718 aaKnown RBP3.23□□□□□ -1.89
NUP85-209ENST00000578987 POMPQ9Y244 141 aa3.23□□□□□ -1.89
NUP85-209ENST00000578987 TIMM10BQ9Y5J6 103 aa3.23□□□□□ -1.89
NUP85-209ENST00000578987 INSIG2Q9Y5U4 225 aa3.23□□□□□ -1.89
NUP85-209ENST00000578987 AUP1Q9Y679 476 aa3.23□□□□□ -1.89
NUP85-209ENST00000578987 TCRBV5S2A0A599 114 aa3.22□□□□□ -1.89
NUP85-209ENST00000578987 F5H5P2 479 aa3.22□□□□□ -1.89
NUP85-209ENST00000578987 TMEM178BH3BS89 294 aa3.22□□□□□ -1.89
NUP85-209ENST00000578987 CDC42EP2O14613 210 aa3.22□□□□□ -1.89
NUP85-209ENST00000578987 FFAR1O14842 300 aa3.22□□□□□ -1.89
NUP85-209ENST00000578987 RGS13O14921 159 aa3.22□□□□□ -1.89
NUP85-209ENST00000578987 ARPC2O15144 300 aa3.22□□□□□ -1.89
NUP85-209ENST00000578987 HOXA3O43365 443 aaPredicted RBP3.22□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms