RNA–Protein interactions for RNA: ENST00000577943.2

RN7SL560P-201, Transcript of RNA, 7SL, cytoplasmic 560, pseudogene, humanhuman

BASIC

Gene RN7SL560P, Length 264 nt, Biotype misc RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RN7SL560P-201ENST00000577943 SLC6A7Q99884 636 aa12.6□□□□□ -0.39
RN7SL560P-201ENST00000577943 RBM4Q9BWF3 364 aaKnown RBP12.6□□□□□ -0.39
RN7SL560P-201ENST00000577943 MYLK2Q9H1R3 596 aa12.6□□□□□ -0.39
RN7SL560P-201ENST00000577943 ATPIF1Q9UII2 106 aa12.6□□□□□ -0.39
RN7SL560P-201ENST00000577943 PPIAL4EA0A075B759 164 aa12.59□□□□□ -0.39
RN7SL560P-201ENST00000577943 PPIAL4CA0A0B4J2A2 164 aa12.59□□□□□ -0.39
RN7SL560P-201ENST00000577943 PPIAL4DF5H284 164 aa12.59□□□□□ -0.39
RN7SL560P-201ENST00000577943 GADD45GO95257 159 aa12.59□□□□□ -0.39
RN7SL560P-201ENST00000577943 PPP1R3DO95685 299 aa12.59□□□□□ -0.39
RN7SL560P-201ENST00000577943 GPANK1O95872 356 aa12.59□□□□□ -0.39
RN7SL560P-201ENST00000577943 PPIAL4FP0DN26 164 aa12.59□□□□□ -0.39
RN7SL560P-201ENST00000577943 ZFP36P26651 326 aaKnown RBP12.59□□□□□ -0.39
RN7SL560P-201ENST00000577943 CFPP27918 469 aa12.59□□□□□ -0.39
RN7SL560P-201ENST00000577943 SMIM11AP58511 58 aa12.59□□□□□ -0.39
RN7SL560P-201ENST00000577943 BTG1P62324 171 aa12.59□□□□□ -0.39
RN7SL560P-201ENST00000577943 SPIBQ01892 262 aa12.59□□□□□ -0.39
RN7SL560P-201ENST00000577943 HLXQ14774 488 aaPredicted RBP12.59□□□□□ -0.39
RN7SL560P-201ENST00000577943 KCNMB1Q16558 191 aa12.59□□□□□ -0.39
RN7SL560P-201ENST00000577943 MEP1BQ16820 701 aa12.59□□□□□ -0.39
RN7SL560P-201ENST00000577943 TMEM155Q4W5P6 130 aa12.59□□□□□ -0.39
RN7SL560P-201ENST00000577943 LEG1Q6P5S2 330 aa12.59□□□□□ -0.39
RN7SL560P-201ENST00000577943 LRRC28Q86X40 367 aaPredicted RBP12.59□□□□□ -0.39
RN7SL560P-201ENST00000577943 FANK1Q8TC84 345 aa12.59□□□□□ -0.39
RN7SL560P-201ENST00000577943 FAM216AQ8WUB2 273 aa12.59□□□□□ -0.39
RN7SL560P-201ENST00000577943 C22orf15Q8WYQ4 148 aa12.59□□□□□ -0.39
RN7SL560P-201ENST00000577943 APOBEC3DQ96AK3 386 aaPredicted RBP12.59□□□□□ -0.39
RN7SL560P-201ENST00000577943 DHRS1Q96LJ7 313 aa12.59□□□□□ -0.39
RN7SL560P-201ENST00000577943 GPA33Q99795 319 aa12.59□□□□□ -0.39
RN7SL560P-201ENST00000577943 FAM107BQ9H098 131 aa12.59□□□□□ -0.39
RN7SL560P-201ENST00000577943 GORASP2Q9H8Y8 452 aa12.59□□□□□ -0.39
RN7SL560P-201ENST00000577943 PATZ1Q9HBE1 687 aaKnown RBP12.59□□□□□ -0.39
RN7SL560P-201ENST00000577943 SRA1Q9HD15 236 aaKnown RBP12.59□□□□□ -0.39
RN7SL560P-201ENST00000577943 OPN4Q9UHM6 478 aa12.59□□□□□ -0.39
RN7SL560P-201ENST00000577943 DCTN6O00399 190 aa12.58□□□□□ -0.4
RN7SL560P-201ENST00000577943 RENP00797 406 aa12.58□□□□□ -0.4
RN7SL560P-201ENST00000577943 FPR2P25090 351 aa12.58□□□□□ -0.4
RN7SL560P-201ENST00000577943 SLC6A6P31641 620 aa12.58□□□□□ -0.4
RN7SL560P-201ENST00000577943 ZMYND11Q15326 602 aa12.58□□□□□ -0.4
RN7SL560P-201ENST00000577943 OR2T2Q6IF00 324 aa12.58□□□□□ -0.4
RN7SL560P-201ENST00000577943 SLC27A4Q6P1M0 643 aa12.58□□□□□ -0.4
RN7SL560P-201ENST00000577943 CORO6Q6QEF8 472 aa12.58□□□□□ -0.4
RN7SL560P-201ENST00000577943 FBXW12Q6X9E4 464 aa12.58□□□□□ -0.4
RN7SL560P-201ENST00000577943 OR8G5Q8NG78 346 aa12.58□□□□□ -0.4
RN7SL560P-201ENST00000577943 PYURFQ96I23 114 aa12.58□□□□□ -0.4
RN7SL560P-201ENST00000577943 NMNAT3Q96T66 252 aa12.58□□□□□ -0.4
RN7SL560P-201ENST00000577943 COQ7Q99807 217 aa12.58□□□□□ -0.4
RN7SL560P-201ENST00000577943 FUZQ9BT04 418 aa12.58□□□□□ -0.4
RN7SL560P-201ENST00000577943 HDHD2Q9H0R4 259 aa12.58□□□□□ -0.4
RN7SL560P-201ENST00000577943 OR52D1Q9H346 318 aa12.58□□□□□ -0.4
RN7SL560P-201ENST00000577943 LHFPL6Q9Y693 200 aa12.58□□□□□ -0.4
RN7SL560P-201ENST00000577943 IGLV1-36A0A0B4J1U3 117 aa12.57□□□□□ -0.4
RN7SL560P-201ENST00000577943 TMEM178BH3BS89 294 aa12.57□□□□□ -0.4
RN7SL560P-201ENST00000577943 OR10H3O60404 316 aa12.57□□□□□ -0.4
RN7SL560P-201ENST00000577943 NOS3P29474 1203 aa12.57□□□□□ -0.4
RN7SL560P-201ENST00000577943 MDH2P40926 338 aaKnown RBP12.57□□□□□ -0.4
RN7SL560P-201ENST00000577943 SEC61A1P61619 476 aaKnown RBP12.57□□□□□ -0.4
RN7SL560P-201ENST00000577943 RFX4Q33E94 735 aa12.57□□□□□ -0.4
RN7SL560P-201ENST00000577943 ESCO2Q56NI9 601 aa12.57□□□□□ -0.4
RN7SL560P-201ENST00000577943 ARMCX4Q5H9R4 360 aa12.57□□□□□ -0.4
RN7SL560P-201ENST00000577943 OR6V1Q8N148 313 aa12.57□□□□□ -0.4
RN7SL560P-201ENST00000577943 OR10AD1Q8NGE0 317 aa12.57□□□□□ -0.4
RN7SL560P-201ENST00000577943 OR13G1Q8NGZ3 307 aa12.57□□□□□ -0.4
RN7SL560P-201ENST00000577943 MCUR1Q96AQ8 359 aa12.57□□□□□ -0.4
RN7SL560P-201ENST00000577943 ZNF582Q96NG8 517 aaPredicted RBP12.57□□□□□ -0.4
RN7SL560P-201ENST00000577943 SIGLEC11Q96RL6 698 aa12.57□□□□□ -0.4
RN7SL560P-201ENST00000577943 IFT27Q9BW83 186 aa12.57□□□□□ -0.4
RN7SL560P-201ENST00000577943 CDADC1Q9BWV3 514 aa12.57□□□□□ -0.4
RN7SL560P-201ENST00000577943 NSRP1Q9H0G5 558 aaKnown RBP12.57□□□□□ -0.4
RN7SL560P-201ENST00000577943 GCM1Q9NP62 436 aa12.57□□□□□ -0.4
RN7SL560P-201ENST00000577943 RPRD1BQ9NQG5 326 aaKnown RBP12.57□□□□□ -0.4
RN7SL560P-201ENST00000577943 MMP26Q9NRE1 261 aa12.57□□□□□ -0.4
RN7SL560P-201ENST00000577943 MAGEL2Q9UJ55 1249 aa12.57□□□□□ -0.4
RN7SL560P-201ENST00000577943 B9D1Q9UPM9 204 aa12.57□□□□□ -0.4
RN7SL560P-201ENST00000577943 AUP1Q9Y679 476 aa12.57□□□□□ -0.4
RN7SL560P-201ENST00000577943 NBEAL1Q6ZS30 2694 aa12.56□□□□□ -0.4
RN7SL560P-201ENST00000577943 TMEM89A2RUT3 159 aa12.56□□□□□ -0.4
RN7SL560P-201ENST00000577943 TRAPPC2LH3BP13 241 aa12.56□□□□□ -0.4
RN7SL560P-201ENST00000577943 IFNL4K9M1U5 179 aa12.56□□□□□ -0.4
RN7SL560P-201ENST00000577943 ARPC3O15145 178 aa12.56□□□□□ -0.4
RN7SL560P-201ENST00000577943 FSHBP01225 129 aa12.56□□□□□ -0.4
RN7SL560P-201ENST00000577943 SEMG1P04279 462 aa12.56□□□□□ -0.4
RN7SL560P-201ENST00000577943 FABP3P05413 133 aa12.56□□□□□ -0.4
RN7SL560P-201ENST00000577943 HSD17B1P14061 328 aa12.56□□□□□ -0.4
RN7SL560P-201ENST00000577943 HIST1H1CP16403 213 aaKnown RBP12.56□□□□□ -0.4
RN7SL560P-201ENST00000577943 SLC6A9P48067 706 aa12.56□□□□□ -0.4
RN7SL560P-201ENST00000577943 SRP9P49458 86 aaKnown RBP12.56□□□□□ -0.4
RN7SL560P-201ENST00000577943 COMPP49747 757 aaPredicted RBP12.56□□□□□ -0.4
RN7SL560P-201ENST00000577943 MMP16P51512 607 aa12.56□□□□□ -0.4
RN7SL560P-201ENST00000577943 HIST1H3AP68431 136 aa12.56□□□□□ -0.4
RN7SL560P-201ENST00000577943 COX10Q12887 443 aa12.56□□□□□ -0.4
RN7SL560P-201ENST00000577943 ZNF154Q13106 437 aa12.56□□□□□ -0.4
RN7SL560P-201ENST00000577943 SLC36A3Q495N2 470 aa12.56□□□□□ -0.4
RN7SL560P-201ENST00000577943 HIST2H3PS2Q5TEC6 136 aa12.56□□□□□ -0.4
RN7SL560P-201ENST00000577943 HIST2H3AQ71DI3 136 aa12.56□□□□□ -0.4
RN7SL560P-201ENST00000577943 CPLX4Q7Z7G2 160 aa12.56□□□□□ -0.4
RN7SL560P-201ENST00000577943 LINC00346Q8IVM7 164 aa12.56□□□□□ -0.4
RN7SL560P-201ENST00000577943 MUC20Q8N307 709 aaPredicted RBP12.56□□□□□ -0.4
RN7SL560P-201ENST00000577943 C3orf56Q8N813 242 aa12.56□□□□□ -0.4
RN7SL560P-201ENST00000577943 BHLHE23Q8NDY6 225 aa12.56□□□□□ -0.4
RN7SL560P-201ENST00000577943 DEFB108BQ8NET1 73 aa12.56□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms