RNA–Protein interactions for RNA: ENST00000577827.5

PTPRM-205, Transcript of protein tyrosine phosphatase, receptor type M, humanhuman

TSL 2

Gene PTPRM, Length 4,640 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRM-205ENST00000577827 RAB13P51153 203 aa9.41□□□□□ -0.9
PTPRM-205ENST00000577827 ZNF684Q5T5D7 378 aa9.41□□□□□ -0.9
PTPRM-205ENST00000577827 ALKBH2Q6NS38 261 aa9.41□□□□□ -0.9
PTPRM-205ENST00000577827 PWWP2BQ6NUJ5 590 aa9.41□□□□□ -0.9
PTPRM-205ENST00000577827 FAHD2BQ6P2I3 314 aaPredicted RBP9.41□□□□□ -0.9
PTPRM-205ENST00000577827 CD200R1LQ6Q8B3 271 aa9.41□□□□□ -0.9
PTPRM-205ENST00000577827 TMEM91Q6ZNR0 172 aa9.41□□□□□ -0.9
PTPRM-205ENST00000577827 ZNF100Q8IYN0 542 aa9.41□□□□□ -0.9
PTPRM-205ENST00000577827 OR4D11Q8NGI4 311 aa9.41□□□□□ -0.9
PTPRM-205ENST00000577827 OR5D18Q8NGL1 313 aa9.41□□□□□ -0.9
PTPRM-205ENST00000577827 OR2G3Q8NGZ4 309 aa9.41□□□□□ -0.9
PTPRM-205ENST00000577827 C16orf52Q8NHV5 167 aa9.41□□□□□ -0.9
PTPRM-205ENST00000577827 SLAMF6Q96DU3 332 aa9.41□□□□□ -0.9
PTPRM-205ENST00000577827 FAHD2AQ96GK7 314 aa9.41□□□□□ -0.9
PTPRM-205ENST00000577827 C4orf45Q96LM5 186 aa9.41□□□□□ -0.9
PTPRM-205ENST00000577827 OPN4Q9UHM6 478 aa9.41□□□□□ -0.9
PTPRM-205ENST00000577827 B9D1Q9UPM9 204 aa9.41□□□□□ -0.9
PTPRM-205ENST00000577827 TMEM184BQ9Y519 407 aaPredicted RBP9.41□□□□□ -0.9
PTPRM-205ENST00000577827 UBR3Q6ZT12 1888 aa9.41□□□□□ -0.9
PTPRM-205ENST00000577827 DSPPQ9NZW4 1301 aa9.41□□□□□ -0.9
PTPRM-205ENST00000577827 CDC42EP2O14613 210 aa9.41□□□□□ -0.9
PTPRM-205ENST00000577827 CFIP05156 583 aa9.41□□□□□ -0.9
PTPRM-205ENST00000577827 DBHP09172 617 aa9.41□□□□□ -0.9
PTPRM-205ENST00000577827 RPS2P15880 293 aaKnown RBP9.41□□□□□ -0.9
PTPRM-205ENST00000577827 NFYBP25208 207 aa9.41□□□□□ -0.9
PTPRM-205ENST00000577827 DPP4P27487 766 aa9.41□□□□□ -0.9
PTPRM-205ENST00000577827 CTHP32929 405 aa9.41□□□□□ -0.9
PTPRM-205ENST00000577827 FASLGP48023 281 aa9.41□□□□□ -0.9
PTPRM-205ENST00000577827 CLINT1Q14677 625 aa9.41□□□□□ -0.9
PTPRM-205ENST00000577827 CDKN3Q16667 212 aa9.41□□□□□ -0.9
PTPRM-205ENST00000577827 LAIR1Q6GTX8 287 aa9.41□□□□□ -0.9
PTPRM-205ENST00000577827 TANGO2Q6ICL3 276 aa9.41□□□□□ -0.9
PTPRM-205ENST00000577827 MARCH3Q86UD3 253 aa9.41□□□□□ -0.9
PTPRM-205ENST00000577827 FAM181AQ8N9Y4 354 aa9.41□□□□□ -0.9
PTPRM-205ENST00000577827 OR4D6Q8NGJ1 314 aa9.41□□□□□ -0.9
PTPRM-205ENST00000577827 TOE1Q96GM8 510 aaKnown RBP9.41□□□□□ -0.9
PTPRM-205ENST00000577827 TMEM231Q9H6L2 316 aa9.41□□□□□ -0.9
PTPRM-205ENST00000577827 FN3KRPQ9HA64 309 aa9.41□□□□□ -0.9
PTPRM-205ENST00000577827 TMEM100Q9NV29 134 aa9.41□□□□□ -0.9
PTPRM-205ENST00000577827 ZNF107Q9UII5 783 aaPredicted RBP9.41□□□□□ -0.9
PTPRM-205ENST00000577827 SLC17A4Q9Y2C5 497 aa9.41□□□□□ -0.9
PTPRM-205ENST00000577827 TRBV11-1A0A0K0K1C0 115 aa9.41□□□□□ -0.9
PTPRM-205ENST00000577827 CTAG2O75638 210 aa9.41□□□□□ -0.9
PTPRM-205ENST00000577827 HPNP05981 417 aa9.41□□□□□ -0.9
PTPRM-205ENST00000577827 OMGP23515 440 aa9.41□□□□□ -0.9
PTPRM-205ENST00000577827 VWA2Q5GFL6 755 aa9.41□□□□□ -0.9
PTPRM-205ENST00000577827 CST9Q5W186 159 aa9.41□□□□□ -0.9
PTPRM-205ENST00000577827 KIAA0895LQ68EN5 471 aa9.41□□□□□ -0.9
PTPRM-205ENST00000577827 MOB3CQ70IA8 216 aa9.41□□□□□ -0.9
PTPRM-205ENST00000577827 OR51A2Q8NGJ7 313 aa9.41□□□□□ -0.9
PTPRM-205ENST00000577827 AP1S3Q96PC3 154 aa9.41□□□□□ -0.9
PTPRM-205ENST00000577827 GAS2L1Q99501 681 aaPredicted RBP9.41□□□□□ -0.9
PTPRM-205ENST00000577827 BCO1Q9HAY6 547 aa9.41□□□□□ -0.9
PTPRM-205ENST00000577827 CHST11Q9NPF2 352 aa9.41□□□□□ -0.9
PTPRM-205ENST00000577827 WSB2Q9NYS7 404 aaPredicted RBP9.41□□□□□ -0.9
PTPRM-205ENST00000577827 CHRNA9Q9UGM1 479 aa9.41□□□□□ -0.9
PTPRM-205ENST00000577827 POMT1Q9Y6A1 747 aa9.41□□□□□ -0.9
PTPRM-205ENST00000577827 ANKRD30BLA7E2S9 258 aa9.4□□□□□ -0.9
PTPRM-205ENST00000577827 RNASEK-C17orf49H0YIS7 233 aa9.4□□□□□ -0.9
PTPRM-205ENST00000577827 BHLHE40O14503 412 aa9.4□□□□□ -0.9
PTPRM-205ENST00000577827 ZNF354AO60765 605 aaPredicted RBP9.4□□□□□ -0.9
PTPRM-205ENST00000577827 CEACAM5P06731 702 aa9.4□□□□□ -0.9
PTPRM-205ENST00000577827 OR13C7P0DN81 318 aa9.4□□□□□ -0.9
PTPRM-205ENST00000577827 NKX2-1P43699 371 aaPredicted RBP9.4□□□□□ -0.9
PTPRM-205ENST00000577827 LIMS1P48059 325 aa9.4□□□□□ -0.9
PTPRM-205ENST00000577827 ADPRHP54922 357 aa9.4□□□□□ -0.9
PTPRM-205ENST00000577827 MRPS34P82930 218 aaKnown RBP9.4□□□□□ -0.9
PTPRM-205ENST00000577827 GUCA2AQ02747 115 aa9.4□□□□□ -0.9
PTPRM-205ENST00000577827 ZNF85Q03923 595 aa9.4□□□□□ -0.9
PTPRM-205ENST00000577827 TMEM176BQ3YBM2 270 aaPredicted RBP9.4□□□□□ -0.9
PTPRM-205ENST00000577827 LYPD8Q6UX82 237 aa9.4□□□□□ -0.9
PTPRM-205ENST00000577827 ZNF687Q8N1G0 1237 aa9.4□□□□□ -0.9
PTPRM-205ENST00000577827 OR5M8Q8NGP6 311 aa9.4□□□□□ -0.9
PTPRM-205ENST00000577827 OR1S2Q8NGQ3 325 aa9.4□□□□□ -0.9
PTPRM-205ENST00000577827 SLC37A2Q8TED4 501 aa9.4□□□□□ -0.9
PTPRM-205ENST00000577827 OIT3Q8WWZ8 545 aa9.4□□□□□ -0.9
PTPRM-205ENST00000577827 ST8SIA1Q92185 356 aa9.4□□□□□ -0.9
PTPRM-205ENST00000577827 ANKRD9Q96BM1 317 aaPredicted RBP9.4□□□□□ -0.9
PTPRM-205ENST00000577827 ZG16BQ96DA0 208 aa9.4□□□□□ -0.9
PTPRM-205ENST00000577827 TRMT61AQ96FX7 289 aaKnown RBP9.4□□□□□ -0.9
PTPRM-205ENST00000577827 TINAGL1Q9GZM7 467 aaPredicted RBP9.4□□□□□ -0.9
PTPRM-205ENST00000577827 NKX2-4Q9H2Z4 354 aa9.4□□□□□ -0.9
PTPRM-205ENST00000577827 GON4LQ3T8J9 2241 aa9.4□□□□□ -0.9
PTPRM-205ENST00000577827 PTPRFP10586 1907 aa9.4□□□□□ -0.9
PTPRM-205ENST00000577827 BTBD17A6NE02 478 aa9.4□□□□□ -0.9
PTPRM-205ENST00000577827 DCTN6O00399 190 aa9.4□□□□□ -0.9
PTPRM-205ENST00000577827 F10P00742 488 aa9.4□□□□□ -0.9
PTPRM-205ENST00000577827 CBR1P16152 277 aa9.4□□□□□ -0.9
PTPRM-205ENST00000577827 BTG2P78543 158 aa9.4□□□□□ -0.9
PTPRM-205ENST00000577827 HSF1Q00613 529 aa9.4□□□□□ -0.9
PTPRM-205ENST00000577827 TAF9Q16594 264 aa9.4□□□□□ -0.9
PTPRM-205ENST00000577827 RPUSD3Q6P087 351 aaKnown RBP9.4□□□□□ -0.9
PTPRM-205ENST00000577827 THSD4Q6ZMP0 1018 aa9.4□□□□□ -0.9
PTPRM-205ENST00000577827 SLC38A9Q8NBW4 561 aa9.4□□□□□ -0.9
PTPRM-205ENST00000577827 ASB16Q96NS5 453 aa9.4□□□□□ -0.9
PTPRM-205ENST00000577827 NUDT9Q9BW91 350 aa9.4□□□□□ -0.9
PTPRM-205ENST00000577827 RAB18Q9NP72 206 aa9.4□□□□□ -0.9
PTPRM-205ENST00000577827 SLC39A9Q9NUM3 307 aa9.4□□□□□ -0.9
PTPRM-205ENST00000577827 RNF150Q9ULK6 438 aa9.4□□□□□ -0.9
PTPRM-205ENST00000577827 PCDHGA1Q9Y5H4 931 aa9.4□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms