RNA–Protein interactions for RNA: ENST00000577779.1

PPP4R1-206, Transcript of protein phosphatase 4 regulatory subunit 1, humanhuman

TSL 2

Gene PPP4R1, Length 481 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R1-206ENST00000577779 CLDN22Q8N7P3 220 aa11.55□□□□□ -0.56
PPP4R1-206ENST00000577779 NFKBIDQ8NI38 313 aa11.55□□□□□ -0.56
PPP4R1-206ENST00000577779 TCP10LQ8TDR4 215 aa11.55□□□□□ -0.56
PPP4R1-206ENST00000577779 PCDHAC1Q9H158 963 aa11.55□□□□□ -0.56
PPP4R1-206ENST00000577779 RANBP3Q9H6Z4 567 aaPredicted RBP11.55□□□□□ -0.56
PPP4R1-206ENST00000577779 PPCSQ9HAB8 311 aa11.55□□□□□ -0.56
PPP4R1-206ENST00000577779 ONECUT1Q9UBC0 465 aa11.55□□□□□ -0.56
PPP4R1-206ENST00000577779 MEIOCA2RUB1 952 aa11.54□□□□□ -0.56
PPP4R1-206ENST00000577779 PRORSD1PA6NEY8 169 aa11.54□□□□□ -0.56
PPP4R1-206ENST00000577779 C12orf71A8MTZ7 269 aa11.54□□□□□ -0.56
PPP4R1-206ENST00000577779 ADARB2-AS1A8MUL3 147 aa11.54□□□□□ -0.56
PPP4R1-206ENST00000577779 DOK2O60496 412 aa11.54□□□□□ -0.56
PPP4R1-206ENST00000577779 FAM20BO75063 409 aa11.54□□□□□ -0.56
PPP4R1-206ENST00000577779 ECDO95905 644 aaPredicted RBP11.54□□□□□ -0.56
PPP4R1-206ENST00000577779 BPGMP07738 259 aa11.54□□□□□ -0.56
PPP4R1-206ENST00000577779 GATA4P43694 442 aa11.54□□□□□ -0.56
PPP4R1-206ENST00000577779 PRB3Q04118 309 aaPredicted RBP11.54□□□□□ -0.56
PPP4R1-206ENST00000577779 LY6EQ16553 131 aa11.54□□□□□ -0.56
PPP4R1-206ENST00000577779 WHAMMP3Q1A5X7 153 aa11.54□□□□□ -0.56
PPP4R1-206ENST00000577779 ARMC4Q5T2S8 1044 aa11.54□□□□□ -0.56
PPP4R1-206ENST00000577779 SFRP4Q6FHJ7 346 aaPredicted RBP11.54□□□□□ -0.56
PPP4R1-206ENST00000577779 OGFOD2Q6N063 350 aa11.54□□□□□ -0.56
PPP4R1-206ENST00000577779 SLC30A8Q8IWU4 369 aa11.54□□□□□ -0.56
PPP4R1-206ENST00000577779 BOLLQ8N9W6 283 aaKnown RBP11.54□□□□□ -0.56
PPP4R1-206ENST00000577779 BHLHE23Q8NDY6 225 aa11.54□□□□□ -0.56
PPP4R1-206ENST00000577779 Q8TCH9 128 aa11.54□□□□□ -0.56
PPP4R1-206ENST00000577779 HDAC2Q92769 488 aaKnown RBP11.54□□□□□ -0.56
PPP4R1-206ENST00000577779 ITCHQ96J02 903 aa11.54□□□□□ -0.56
PPP4R1-206ENST00000577779 MCHR1Q99705 422 aa11.54□□□□□ -0.56
PPP4R1-206ENST00000577779 CITED2Q99967 270 aaPredicted RBP11.54□□□□□ -0.56
PPP4R1-206ENST00000577779 RAD21L1Q9H4I0 556 aa11.54□□□□□ -0.56
PPP4R1-206ENST00000577779 RMND5AQ9H871 391 aa11.54□□□□□ -0.56
PPP4R1-206ENST00000577779 SIRT7Q9NRC8 400 aa11.54□□□□□ -0.56
PPP4R1-206ENST00000577779 INIPQ9NRY2 104 aa11.54□□□□□ -0.56
PPP4R1-206ENST00000577779 PTTG3PQ9NZH4 202 aa11.54□□□□□ -0.56
PPP4R1-206ENST00000577779 ANGPT4Q9Y264 503 aa11.54□□□□□ -0.56
PPP4R1-206ENST00000577779 A0A1W2PPL8 197 aa11.53□□□□□ -0.56
PPP4R1-206ENST00000577779 LGALS8O00214 317 aa11.53□□□□□ -0.56
PPP4R1-206ENST00000577779 NHLRC4P0CG21 123 aaPredicted RBP11.53□□□□□ -0.56
PPP4R1-206ENST00000577779 BMP2P12643 396 aa11.53□□□□□ -0.56
PPP4R1-206ENST00000577779 MSR1P21757 451 aa11.53□□□□□ -0.56
PPP4R1-206ENST00000577779 SAA4P35542 130 aa11.53□□□□□ -0.56
PPP4R1-206ENST00000577779 RPL14P50914 215 aaKnown RBP11.53□□□□□ -0.56
PPP4R1-206ENST00000577779 FADDQ13158 208 aa11.53□□□□□ -0.56
PPP4R1-206ENST00000577779 ENDOGQ14249 297 aaKnown RBP11.53□□□□□ -0.56
PPP4R1-206ENST00000577779 OR8B8Q15620 311 aa11.53□□□□□ -0.56
PPP4R1-206ENST00000577779 CLEC12AQ5QGZ9 265 aa11.53□□□□□ -0.56
PPP4R1-206ENST00000577779 C6orf10Q5SRN2 563 aa11.53□□□□□ -0.56
PPP4R1-206ENST00000577779 INTS11Q5TA45 600 aaKnown RBP11.53□□□□□ -0.56
PPP4R1-206ENST00000577779 NXNQ6DKJ4 435 aa11.53□□□□□ -0.56
PPP4R1-206ENST00000577779 REEP3Q6NUK4 255 aa11.53□□□□□ -0.56
PPP4R1-206ENST00000577779 METAP1DQ6UB28 335 aaPredicted RBP11.53□□□□□ -0.56
PPP4R1-206ENST00000577779 FBXW12Q6X9E4 464 aa11.53□□□□□ -0.56
PPP4R1-206ENST00000577779 SYT9Q86SS6 491 aa11.53□□□□□ -0.56
PPP4R1-206ENST00000577779 IFT20Q8IY31 132 aa11.53□□□□□ -0.56
PPP4R1-206ENST00000577779 DTX3Q8N9I9 347 aa11.53□□□□□ -0.56
PPP4R1-206ENST00000577779 ERGIC1Q969X5 290 aa11.53□□□□□ -0.56
PPP4R1-206ENST00000577779 RAB18Q9NP72 206 aa11.53□□□□□ -0.56
PPP4R1-206ENST00000577779 UFSP2Q9NUQ7 469 aa11.53□□□□□ -0.56
PPP4R1-206ENST00000577779 TMEM100Q9NV29 134 aa11.53□□□□□ -0.56
PPP4R1-206ENST00000577779 DNAJB11Q9UBS4 358 aa11.53□□□□□ -0.56
PPP4R1-206ENST00000577779 RPUSD1Q9UJJ7 312 aaKnown RBP11.53□□□□□ -0.56
PPP4R1-206ENST00000577779 MAB21L2Q9Y586 359 aa11.53□□□□□ -0.56
PPP4R1-206ENST00000577779 CPSF4LA6NMK7 179 aaKnown RBP11.52□□□□□ -0.57
PPP4R1-206ENST00000577779 M0R3H8 397 aa11.52□□□□□ -0.57
PPP4R1-206ENST00000577779 CLIC1O00299 241 aa11.52□□□□□ -0.57
PPP4R1-206ENST00000577779 DVL1O14640 695 aa11.52□□□□□ -0.57
PPP4R1-206ENST00000577779 SGCEO43556 437 aa11.52□□□□□ -0.57
PPP4R1-206ENST00000577779 NDUFA2O43678 99 aa11.52□□□□□ -0.57
PPP4R1-206ENST00000577779 HLA-DPB1P04440 258 aa11.52□□□□□ -0.57
PPP4R1-206ENST00000577779 FPR3P25089 353 aa11.52□□□□□ -0.57
PPP4R1-206ENST00000577779 AQP2P41181 271 aa11.52□□□□□ -0.57
PPP4R1-206ENST00000577779 SLC35A2P78381 396 aa11.52□□□□□ -0.57
PPP4R1-206ENST00000577779 C11orf91Q3C1V1 193 aa11.52□□□□□ -0.57
PPP4R1-206ENST00000577779 ARMC8Q8IUR7 673 aa11.52□□□□□ -0.57
PPP4R1-206ENST00000577779 CMTM4Q8IZR5 234 aa11.52□□□□□ -0.57
PPP4R1-206ENST00000577779 C10orf111Q8N326 155 aa11.52□□□□□ -0.57
PPP4R1-206ENST00000577779 PAPD5Q8NDF8 572 aaKnown RBP11.52□□□□□ -0.57
PPP4R1-206ENST00000577779 OR5L1Q8NGL2 311 aa11.52□□□□□ -0.57
PPP4R1-206ENST00000577779 UBLCP1Q8WVY7 318 aaPredicted RBP11.52□□□□□ -0.57
PPP4R1-206ENST00000577779 ST8SIA4Q92187 359 aa11.52□□□□□ -0.57
PPP4R1-206ENST00000577779 SLC7A6Q92536 515 aa11.52□□□□□ -0.57
PPP4R1-206ENST00000577779 RBP7Q96R05 134 aa11.52□□□□□ -0.57
PPP4R1-206ENST00000577779 NPFFR1Q9GZQ6 430 aa11.52□□□□□ -0.57
PPP4R1-206ENST00000577779 FAM234AQ9H0X4 552 aa11.52□□□□□ -0.57
PPP4R1-206ENST00000577779 EVA1AQ9H8M9 152 aa11.52□□□□□ -0.57
PPP4R1-206ENST00000577779 RNF7Q9UBF6 113 aa11.52□□□□□ -0.57
PPP4R1-206ENST00000577779 RAP2CQ9Y3L5 183 aa11.52□□□□□ -0.57
PPP4R1-206ENST00000577779 FBP2O00757 339 aa11.51□□□□□ -0.57
PPP4R1-206ENST00000577779 FCN3O75636 299 aa11.51□□□□□ -0.57
PPP4R1-206ENST00000577779 SLC22A3O75751 556 aa11.51□□□□□ -0.57
PPP4R1-206ENST00000577779 LYPD3O95274 346 aa11.51□□□□□ -0.57
PPP4R1-206ENST00000577779 THY1P04216 161 aa11.51□□□□□ -0.57
PPP4R1-206ENST00000577779 RPL4P36578 427 aaKnown RBP11.51□□□□□ -0.57
PPP4R1-206ENST00000577779 ABCE1P61221 599 aaKnown RBP11.51□□□□□ -0.57
PPP4R1-206ENST00000577779 CDK6Q00534 326 aa11.51□□□□□ -0.57
PPP4R1-206ENST00000577779 SCRN3Q0VDG4 424 aa11.51□□□□□ -0.57
PPP4R1-206ENST00000577779 KLRD1Q13241 179 aa11.51□□□□□ -0.57
PPP4R1-206ENST00000577779 MAB21L1Q13394 359 aa11.51□□□□□ -0.57
PPP4R1-206ENST00000577779 DCTN2Q13561 401 aaKnown RBP11.51□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms