RNA–Protein interactions for RNA: ENST00000577664.5

CDK5RAP3-204, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 4

Gene CDK5RAP3, Length 568 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-204ENST00000577664 PTHP01270 115 aa9.68□□□□□ -0.86
CDK5RAP3-204ENST00000577664 SERPINA5P05154 406 aa9.68□□□□□ -0.86
CDK5RAP3-204ENST00000577664 LYNP07948 512 aa9.68□□□□□ -0.86
CDK5RAP3-204ENST00000577664 HTR1AP08908 422 aa9.68□□□□□ -0.86
CDK5RAP3-204ENST00000577664 LIMS3P0CW19 117 aa9.68□□□□□ -0.86
CDK5RAP3-204ENST00000577664 LIMS4P0CW20 117 aa9.68□□□□□ -0.86
CDK5RAP3-204ENST00000577664 ZNF14P17017 642 aaPredicted RBP9.68□□□□□ -0.86
CDK5RAP3-204ENST00000577664 ZNF32P17041 273 aa9.68□□□□□ -0.86
CDK5RAP3-204ENST00000577664 IL32P24001 234 aa9.68□□□□□ -0.86
CDK5RAP3-204ENST00000577664 C21orf33P30042 268 aaPredicted RBP9.68□□□□□ -0.86
CDK5RAP3-204ENST00000577664 ATP6V1E1P36543 226 aa9.68□□□□□ -0.86
CDK5RAP3-204ENST00000577664 CAPZA2P47755 286 aa9.68□□□□□ -0.86
CDK5RAP3-204ENST00000577664 RAB1AP62820 205 aa9.68□□□□□ -0.86
CDK5RAP3-204ENST00000577664 MVKQ03426 396 aa9.68□□□□□ -0.86
CDK5RAP3-204ENST00000577664 ZNF85Q03923 595 aa9.68□□□□□ -0.86
CDK5RAP3-204ENST00000577664 ECH1Q13011 328 aa9.68□□□□□ -0.86
CDK5RAP3-204ENST00000577664 CDONQ4KMG0 1287 aa9.68□□□□□ -0.86
CDK5RAP3-204ENST00000577664 HIKESHIQ53FT3 197 aa9.68□□□□□ -0.86
CDK5RAP3-204ENST00000577664 C9orf135Q5VTT2 229 aa9.68□□□□□ -0.86
CDK5RAP3-204ENST00000577664 KCTD18Q6PI47 426 aaPredicted RBP9.68□□□□□ -0.86
CDK5RAP3-204ENST00000577664 C22orf34Q6ZV56 151 aa9.68□□□□□ -0.86
CDK5RAP3-204ENST00000577664 DCXRQ7Z4W1 244 aa9.68□□□□□ -0.86
CDK5RAP3-204ENST00000577664 ZNF679Q8IYX0 411 aa9.68□□□□□ -0.86
CDK5RAP3-204ENST00000577664 SYS1Q8N2H4 156 aa9.68□□□□□ -0.86
CDK5RAP3-204ENST00000577664 LRRC18Q8N456 261 aa9.68□□□□□ -0.86
CDK5RAP3-204ENST00000577664 IL17RDQ8NFM7 739 aa9.68□□□□□ -0.86
CDK5RAP3-204ENST00000577664 OR10S1Q8NGN2 331 aa9.68□□□□□ -0.86
CDK5RAP3-204ENST00000577664 OR6N2Q8NGY6 317 aa9.68□□□□□ -0.86
CDK5RAP3-204ENST00000577664 OR2AJ1Q8NGZ0 328 aa9.68□□□□□ -0.86
CDK5RAP3-204ENST00000577664 HAVCR2Q8TDQ0 301 aa9.68□□□□□ -0.86
CDK5RAP3-204ENST00000577664 S100PBPQ96BU1 408 aa9.68□□□□□ -0.86
CDK5RAP3-204ENST00000577664 FOXN4Q96NZ1 517 aa9.68□□□□□ -0.86
CDK5RAP3-204ENST00000577664 COQ7Q99807 217 aa9.68□□□□□ -0.86
CDK5RAP3-204ENST00000577664 RHNO1Q9BSD3 238 aa9.68□□□□□ -0.86
CDK5RAP3-204ENST00000577664 OR2H1Q9GZK4 316 aa9.68□□□□□ -0.86
CDK5RAP3-204ENST00000577664 ACTR6Q9GZN1 396 aa9.68□□□□□ -0.86
CDK5RAP3-204ENST00000577664 HDHD2Q9H0R4 259 aa9.68□□□□□ -0.86
CDK5RAP3-204ENST00000577664 WNT5BQ9H1J7 359 aa9.68□□□□□ -0.86
CDK5RAP3-204ENST00000577664 ERVK13-1Q9NX77 482 aa9.68□□□□□ -0.86
CDK5RAP3-204ENST00000577664 LAMP5Q9UJQ1 280 aa9.68□□□□□ -0.86
CDK5RAP3-204ENST00000577664 COPS3Q9UNS2 423 aa9.68□□□□□ -0.86
CDK5RAP3-204ENST00000577664 CAB39Q9Y376 341 aaPredicted RBP9.68□□□□□ -0.86
CDK5RAP3-204ENST00000577664 HIVEP2P31629 2446 aa9.67□□□□□ -0.86
CDK5RAP3-204ENST00000577664 NKX2-6A6NCS4 301 aa9.67□□□□□ -0.86
CDK5RAP3-204ENST00000577664 ZNF670-ZNF695F2Z2N8 137 aa9.67□□□□□ -0.86
CDK5RAP3-204ENST00000577664 SGCEO43556 437 aa9.67□□□□□ -0.86
CDK5RAP3-204ENST00000577664 RGS10O43665 173 aa9.67□□□□□ -0.86
CDK5RAP3-204ENST00000577664 ABHD16AO95870 558 aa9.67□□□□□ -0.86
CDK5RAP3-204ENST00000577664 HLA-HP01893 362 aa9.67□□□□□ -0.86
CDK5RAP3-204ENST00000577664 CRYGSP22914 178 aa9.67□□□□□ -0.86
CDK5RAP3-204ENST00000577664 OPRL1P41146 370 aa9.67□□□□□ -0.86
CDK5RAP3-204ENST00000577664 NAA10P41227 235 aaPredicted RBP9.67□□□□□ -0.86
CDK5RAP3-204ENST00000577664 HCCSP53701 268 aa9.67□□□□□ -0.86
CDK5RAP3-204ENST00000577664 UBE2NP61088 152 aaKnown RBP9.67□□□□□ -0.86
CDK5RAP3-204ENST00000577664 ACSM1Q08AH1 577 aa9.67□□□□□ -0.86
CDK5RAP3-204ENST00000577664 RAB35Q15286 201 aa9.67□□□□□ -0.86
CDK5RAP3-204ENST00000577664 TSC22D1Q15714 1073 aa9.67□□□□□ -0.86
CDK5RAP3-204ENST00000577664 TAB1Q15750 504 aa9.67□□□□□ -0.86
CDK5RAP3-204ENST00000577664 GSG1Q2KHT4 349 aa9.67□□□□□ -0.86
CDK5RAP3-204ENST00000577664 ELFN2Q5R3F8 820 aa9.67□□□□□ -0.86
CDK5RAP3-204ENST00000577664 TMEM53Q6P2H8 277 aa9.67□□□□□ -0.86
CDK5RAP3-204ENST00000577664 FDX2Q6P4F2 183 aa9.67□□□□□ -0.86
CDK5RAP3-204ENST00000577664 CFAP77Q6ZQR2 320 aa9.67□□□□□ -0.86
CDK5RAP3-204ENST00000577664 AHSA2Q719I0 299 aa9.67□□□□□ -0.86
CDK5RAP3-204ENST00000577664 VASH1Q7L8A9 365 aaPredicted RBP9.67□□□□□ -0.86
CDK5RAP3-204ENST00000577664 ZNF584Q8IVC4 421 aa9.67□□□□□ -0.86
CDK5RAP3-204ENST00000577664 ALDH16A1Q8IZ83 802 aa9.67□□□□□ -0.86
CDK5RAP3-204ENST00000577664 STX19Q8N4C7 294 aa9.67□□□□□ -0.86
CDK5RAP3-204ENST00000577664 NANOGP1Q8N7R0 232 aa9.67□□□□□ -0.86
CDK5RAP3-204ENST00000577664 CPEB3Q8NE35 698 aaKnown RBP9.67□□□□□ -0.86
CDK5RAP3-204ENST00000577664 OR52N1Q8NH53 320 aa9.67□□□□□ -0.86
CDK5RAP3-204ENST00000577664 OR52N5Q8NH56 324 aa9.67□□□□□ -0.86
CDK5RAP3-204ENST00000577664 MUCL1Q96DR8 90 aa9.67□□□□□ -0.86
CDK5RAP3-204ENST00000577664 MRPL48Q96GC5 212 aaKnown RBP9.67□□□□□ -0.86
CDK5RAP3-204ENST00000577664 DACH2Q96NX9 599 aa9.67□□□□□ -0.86
CDK5RAP3-204ENST00000577664 OR8B4Q96RC9 309 aa9.67□□□□□ -0.86
CDK5RAP3-204ENST00000577664 NIPAL2Q9H841 368 aa9.67□□□□□ -0.86
CDK5RAP3-204ENST00000577664 ST6GALNAC2Q9UJ37 374 aa9.67□□□□□ -0.86
CDK5RAP3-204ENST00000577664 DAPL1A0PJW8 107 aa9.66□□□□□ -0.86
CDK5RAP3-204ENST00000577664 ACOD1A6NK06 481 aa9.66□□□□□ -0.86
CDK5RAP3-204ENST00000577664 ZNF878C9JN71 531 aa9.66□□□□□ -0.86
CDK5RAP3-204ENST00000577664 SEC14L2O76054 403 aa9.66□□□□□ -0.86
CDK5RAP3-204ENST00000577664 F12P00748 615 aaPredicted RBP9.66□□□□□ -0.86
CDK5RAP3-204ENST00000577664 THBDP07204 575 aa9.66□□□□□ -0.86
CDK5RAP3-204ENST00000577664 MRPL3P09001 348 aaKnown RBP9.66□□□□□ -0.86
CDK5RAP3-204ENST00000577664 SPARCP09486 303 aa9.66□□□□□ -0.86
CDK5RAP3-204ENST00000577664 RPS27P42677 84 aaKnown RBP9.66□□□□□ -0.86
CDK5RAP3-204ENST00000577664 ETV1P50549 477 aa9.66□□□□□ -0.86
CDK5RAP3-204ENST00000577664 MMP16P51512 607 aa9.66□□□□□ -0.86
CDK5RAP3-204ENST00000577664 ACTA2P62736 377 aa9.66□□□□□ -0.86
CDK5RAP3-204ENST00000577664 GRB2P62993 217 aaKnown RBP9.66□□□□□ -0.86
CDK5RAP3-204ENST00000577664 ACTG2P63267 376 aa9.66□□□□□ -0.86
CDK5RAP3-204ENST00000577664 MRPL28Q13084 256 aaKnown RBP9.66□□□□□ -0.86
CDK5RAP3-204ENST00000577664 EIF2B1Q14232 305 aaKnown RBP9.66□□□□□ -0.86
CDK5RAP3-204ENST00000577664 PPA1Q15181 289 aa9.66□□□□□ -0.86
CDK5RAP3-204ENST00000577664 PABPC1L2AQ5JQF8 200 aa9.66□□□□□ -0.86
CDK5RAP3-204ENST00000577664 ZNF773Q6PK81 442 aa9.66□□□□□ -0.86
CDK5RAP3-204ENST00000577664 CORO6Q6QEF8 472 aa9.66□□□□□ -0.86
CDK5RAP3-204ENST00000577664 ZNF322Q6U7Q0 402 aaPredicted RBP9.66□□□□□ -0.86
CDK5RAP3-204ENST00000577664 PLEKHG7Q6ZR37 379 aa9.66□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms