RNA–Protein interactions for RNA: ENST00000576033.5

CCDC40-215, Transcript of coiled-coil domain containing 40, humanhuman

TSL 4

Gene CCDC40, Length 466 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC40-215ENST00000576033 PEX19P40855 299 aa6.84□□□□□ -1.31
CCDC40-215ENST00000576033 WNT5AP41221 380 aa6.84□□□□□ -1.31
CCDC40-215ENST00000576033 ZNF84P51523 738 aa6.84□□□□□ -1.31
CCDC40-215ENST00000576033 RAB1AP62820 205 aa6.84□□□□□ -1.31
CCDC40-215ENST00000576033 MRPS34P82930 218 aaKnown RBP6.84□□□□□ -1.31
CCDC40-215ENST00000576033 PSG4Q00888 419 aa6.84□□□□□ -1.31
CCDC40-215ENST00000576033 TMED1Q13445 227 aa6.84□□□□□ -1.31
CCDC40-215ENST00000576033 PABPC1L2AQ5JQF8 200 aa6.84□□□□□ -1.31
CCDC40-215ENST00000576033 THEM4Q5T1C6 240 aa6.84□□□□□ -1.31
CCDC40-215ENST00000576033 FAM205BPQ63HN1 556 aa6.84□□□□□ -1.31
CCDC40-215ENST00000576033 GPR139Q6DWJ6 353 aa6.84□□□□□ -1.31
CCDC40-215ENST00000576033 SLC22A25Q6T423 547 aa6.84□□□□□ -1.31
CCDC40-215ENST00000576033 CFAP77Q6ZQR2 320 aa6.84□□□□□ -1.31
CCDC40-215ENST00000576033 ADCK1Q86TW2 530 aa6.84□□□□□ -1.31
CCDC40-215ENST00000576033 P2RY8Q86VZ1 359 aa6.84□□□□□ -1.31
CCDC40-215ENST00000576033 STX19Q8N4C7 294 aa6.84□□□□□ -1.31
CCDC40-215ENST00000576033 RFLNBQ8N5W9 214 aa6.84□□□□□ -1.31
CCDC40-215ENST00000576033 PROKR2Q8NFJ6 384 aa6.84□□□□□ -1.31
CCDC40-215ENST00000576033 OR52I1Q8NGK6 324 aa6.84□□□□□ -1.31
CCDC40-215ENST00000576033 GTF3AQ92664 365 aaKnown RBP6.84□□□□□ -1.31
CCDC40-215ENST00000576033 OTULINQ96BN8 352 aa6.84□□□□□ -1.31
CCDC40-215ENST00000576033 LGALS12Q96DT0 336 aa6.84□□□□□ -1.31
CCDC40-215ENST00000576033 TMEM80Q96HE8 168 aa6.84□□□□□ -1.31
CCDC40-215ENST00000576033 BOD1Q96IK1 185 aa6.84□□□□□ -1.31
CCDC40-215ENST00000576033 TTTY10Q9BZA0 68 aa6.84□□□□□ -1.31
CCDC40-215ENST00000576033 CCDC90BQ9GZT6 254 aa6.84□□□□□ -1.31
CCDC40-215ENST00000576033 RACGAP1Q9H0H5 632 aa6.84□□□□□ -1.31
CCDC40-215ENST00000576033 ESRP2Q9H6T0 727 aaKnown RBP6.84□□□□□ -1.31
CCDC40-215ENST00000576033 MYEF2Q9P2K5 600 aaKnown RBP6.84□□□□□ -1.31
CCDC40-215ENST00000576033 ASH2LQ9UBL3 628 aa6.84□□□□□ -1.31
CCDC40-215ENST00000576033 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP6.84□□□□□ -1.31
CCDC40-215ENST00000576033 B9D1Q9UPM9 204 aa6.84□□□□□ -1.31
CCDC40-215ENST00000576033 EXOGQ9Y2C4 368 aaKnown RBP6.84□□□□□ -1.31
CCDC40-215ENST00000576033 LHFPL6Q9Y693 200 aa6.84□□□□□ -1.31
CCDC40-215ENST00000576033 ATP23Q9Y6H3 246 aa6.84□□□□□ -1.31
CCDC40-215ENST00000576033 SVEP1Q4LDE5 3571 aa6.84□□□□□ -1.31
CCDC40-215ENST00000576033 FLNAP21333 2647 aaKnown RBP6.83□□□□□ -1.32
CCDC40-215ENST00000576033 USF3Q68DE3 2245 aa6.83□□□□□ -1.32
CCDC40-215ENST00000576033 LOC100509620A0A075B734 347 aa6.83□□□□□ -1.32
CCDC40-215ENST00000576033 A0A1W2PPW3 197 aa6.83□□□□□ -1.32
CCDC40-215ENST00000576033 TMEM129A0AVI4 362 aa6.83□□□□□ -1.32
CCDC40-215ENST00000576033 C5orf63A6NC05 138 aa6.83□□□□□ -1.32
CCDC40-215ENST00000576033 CCDC182A6NF36 153 aa6.83□□□□□ -1.32
CCDC40-215ENST00000576033 CCDC160A6NGH7 325 aa6.83□□□□□ -1.32
CCDC40-215ENST00000576033 SNTNA6NMZ2 147 aa6.83□□□□□ -1.32
CCDC40-215ENST00000576033 CENPBD1B2RD01 187 aa6.83□□□□□ -1.32
CCDC40-215ENST00000576033 RER1O15258 196 aa6.83□□□□□ -1.32
CCDC40-215ENST00000576033 IDH3BO43837 385 aa6.83□□□□□ -1.32
CCDC40-215ENST00000576033 KHDRBS3O75525 346 aaKnown RBP6.83□□□□□ -1.32
CCDC40-215ENST00000576033 LY6HO94772 140 aa6.83□□□□□ -1.32
CCDC40-215ENST00000576033 UBL3O95164 117 aa6.83□□□□□ -1.32
CCDC40-215ENST00000576033 RAB36O95755 333 aa6.83□□□□□ -1.32
CCDC40-215ENST00000576033 CD8AP01732 235 aa6.83□□□□□ -1.32
CCDC40-215ENST00000576033 OR8G3PP0DMU2 310 aa6.83□□□□□ -1.32
CCDC40-215ENST00000576033 CBR1P16152 277 aa6.83□□□□□ -1.32
CCDC40-215ENST00000576033 SPI1P17947 270 aa6.83□□□□□ -1.32
CCDC40-215ENST00000576033 MSR1P21757 451 aa6.83□□□□□ -1.32
CCDC40-215ENST00000576033 MTNR1AP48039 350 aa6.83□□□□□ -1.32
CCDC40-215ENST00000576033 SNTB2Q13425 540 aaKnown RBP6.83□□□□□ -1.32
CCDC40-215ENST00000576033 TIGD6Q17RP2 521 aa6.83□□□□□ -1.32
CCDC40-215ENST00000576033 ALKBH6Q3KRA9 238 aa6.83□□□□□ -1.32
CCDC40-215ENST00000576033 KLHL22Q53GT1 634 aa6.83□□□□□ -1.32
CCDC40-215ENST00000576033 CCDC92Q53HC0 331 aaPredicted RBP6.83□□□□□ -1.32
CCDC40-215ENST00000576033 SPATA46Q5T0L3 261 aa6.83□□□□□ -1.32
CCDC40-215ENST00000576033 LINC01590Q5TEZ4 76 aa6.83□□□□□ -1.32
CCDC40-215ENST00000576033 PLBD1Q6P4A8 553 aa6.83□□□□□ -1.32
CCDC40-215ENST00000576033 TMEM108Q6UXF1 575 aa6.83□□□□□ -1.32
CCDC40-215ENST00000576033 RFPL4BQ6ZWI9 263 aa6.83□□□□□ -1.32
CCDC40-215ENST00000576033 SPATC1Q76KD6 591 aa6.83□□□□□ -1.32
CCDC40-215ENST00000576033 HDDC2Q7Z4H3 204 aa6.83□□□□□ -1.32
CCDC40-215ENST00000576033 LRP11Q86VZ4 500 aa6.83□□□□□ -1.32
CCDC40-215ENST00000576033 KRTAP1-3Q8IUG1 177 aa6.83□□□□□ -1.32
CCDC40-215ENST00000576033 GID4Q8IVV7 300 aa6.83□□□□□ -1.32
CCDC40-215ENST00000576033 ZNF101Q8IZC7 436 aa6.83□□□□□ -1.32
CCDC40-215ENST00000576033 NANOGP1Q8N7R0 232 aa6.83□□□□□ -1.32
CCDC40-215ENST00000576033 ZNF511Q8NB15 262 aa6.83□□□□□ -1.32
CCDC40-215ENST00000576033 SLC26A10Q8NG04 563 aa6.83□□□□□ -1.32
CCDC40-215ENST00000576033 OR6K6Q8NGW6 343 aa6.83□□□□□ -1.32
CCDC40-215ENST00000576033 IGFBPL1Q8WX77 278 aa6.83□□□□□ -1.32
CCDC40-215ENST00000576033 RFKQ969G6 155 aa6.83□□□□□ -1.32
CCDC40-215ENST00000576033 OPALINQ96PE5 141 aa6.83□□□□□ -1.32
CCDC40-215ENST00000576033 RBP7Q96R05 134 aa6.83□□□□□ -1.32
CCDC40-215ENST00000576033 OR5M11Q96RB7 305 aa6.83□□□□□ -1.32
CCDC40-215ENST00000576033 AMELYQ99218 206 aa6.83□□□□□ -1.32
CCDC40-215ENST00000576033 CCL19Q99731 98 aa6.83□□□□□ -1.32
CCDC40-215ENST00000576033 TEX12Q9BXU0 123 aa6.83□□□□□ -1.32
CCDC40-215ENST00000576033 NMNAT2Q9BZQ4 307 aa6.83□□□□□ -1.32
CCDC40-215ENST00000576033 OR2H1Q9GZK4 316 aa6.83□□□□□ -1.32
CCDC40-215ENST00000576033 NDEL1Q9GZM8 345 aa6.83□□□□□ -1.32
CCDC40-215ENST00000576033 RNF121Q9H920 327 aa6.83□□□□□ -1.32
CCDC40-215ENST00000576033 WDR76Q9H967 626 aa6.83□□□□□ -1.32
CCDC40-215ENST00000576033 ISYNA1Q9NPH2 558 aa6.83□□□□□ -1.32
CCDC40-215ENST00000576033 HAO2Q9NYQ3 351 aa6.83□□□□□ -1.32
CCDC40-215ENST00000576033 ST6GALNAC2Q9UJ37 374 aa6.83□□□□□ -1.32
CCDC40-215ENST00000576033 POU2F3Q9UKI9 436 aa6.83□□□□□ -1.32
CCDC40-215ENST00000576033 LAMP3Q9UQV4 416 aa6.83□□□□□ -1.32
CCDC40-215ENST00000576033 KLHDC2Q9Y2U9 406 aa6.83□□□□□ -1.32
CCDC40-215ENST00000576033 PRRC2AP48634 2157 aaKnown RBP6.83□□□□□ -1.32
CCDC40-215ENST00000576033 ARFGEF3Q5TH69 2177 aa6.82□□□□□ -1.32
CCDC40-215ENST00000576033 ANK3Q12955 4377 aaKnown RBP6.82□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms