RNA–Protein interactions for RNA: ENST00000575599.5

RPAIN-216, Transcript of RPA interacting protein, humanhuman

TSL 2

Gene RPAIN, Length 1,359 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAIN-216ENST00000575599 MAPK1IP1LQ8NDC0 245 aa11.4□□□□□ -0.59
RPAIN-216ENST00000575599 POM121L2Q96KW2 1035 aa11.4□□□□□ -0.59
RPAIN-216ENST00000575599 SNX18Q96RF0 628 aa11.4□□□□□ -0.59
RPAIN-216ENST00000575599 PITX2Q99697 317 aa11.4□□□□□ -0.59
RPAIN-216ENST00000575599 RHNO1Q9BSD3 238 aa11.4□□□□□ -0.59
RPAIN-216ENST00000575599 BCL2L14Q9BZR8 327 aa11.4□□□□□ -0.59
RPAIN-216ENST00000575599 RAB1BQ9H0U4 201 aa11.4□□□□□ -0.59
RPAIN-216ENST00000575599 TPK1Q9H3S4 243 aa11.4□□□□□ -0.59
RPAIN-216ENST00000575599 MYEF2Q9P2K5 600 aaKnown RBP11.4□□□□□ -0.59
RPAIN-216ENST00000575599 ASH2LQ9UBL3 628 aa11.4□□□□□ -0.59
RPAIN-216ENST00000575599 EIF3KQ9UBQ5 218 aaKnown RBP11.4□□□□□ -0.59
RPAIN-216ENST00000575599 B9D1Q9UPM9 204 aa11.4□□□□□ -0.59
RPAIN-216ENST00000575599 LRCH1Q9Y2L9 728 aa11.4□□□□□ -0.59
RPAIN-216ENST00000575599 HSPE1-MOB4S4R3N1 261 aa11.4□□□□□ -0.59
RPAIN-216ENST00000575599 MAP1AP78559 2803 aaPredicted RBP11.39□□□□□ -0.59
RPAIN-216ENST00000575599 IGHV4-30-2A0A087WSY4 118 aa11.39□□□□□ -0.59
RPAIN-216ENST00000575599 IGLV1-36A0A0B4J1U3 117 aa11.39□□□□□ -0.59
RPAIN-216ENST00000575599 OR6C68A6NDL8 312 aa11.39□□□□□ -0.59
RPAIN-216ENST00000575599 RIIAD1A6NNX1 92 aa11.39□□□□□ -0.59
RPAIN-216ENST00000575599 M0R233 179 aa11.39□□□□□ -0.59
RPAIN-216ENST00000575599 SGCEO43556 437 aa11.39□□□□□ -0.59
RPAIN-216ENST00000575599 F12P00748 615 aaPredicted RBP11.39□□□□□ -0.59
RPAIN-216ENST00000575599 ERCC1P07992 297 aaPredicted RBP11.39□□□□□ -0.59
RPAIN-216ENST00000575599 GAAP10253 952 aa11.39□□□□□ -0.59
RPAIN-216ENST00000575599 PCSK6P29122 969 aa11.39□□□□□ -0.59
RPAIN-216ENST00000575599 WNT5AP41221 380 aa11.39□□□□□ -0.59
RPAIN-216ENST00000575599 RAD52P43351 418 aa11.39□□□□□ -0.59
RPAIN-216ENST00000575599 HTR5AP47898 357 aa11.39□□□□□ -0.59
RPAIN-216ENST00000575599 LSM6P62312 80 aaKnown RBP11.39□□□□□ -0.59
RPAIN-216ENST00000575599 MAD2L1BPQ15013 274 aaPredicted RBP11.39□□□□□ -0.59
RPAIN-216ENST00000575599 ALKBH6Q3KRA9 238 aa11.39□□□□□ -0.59
RPAIN-216ENST00000575599 SPATA46Q5T0L3 261 aa11.39□□□□□ -0.59
RPAIN-216ENST00000575599 C12orf73Q69YU5 71 aa11.39□□□□□ -0.59
RPAIN-216ENST00000575599 CLEC9AQ6UXN8 241 aa11.39□□□□□ -0.59
RPAIN-216ENST00000575599 DNM1P46Q6ZS02 220 aa11.39□□□□□ -0.59
RPAIN-216ENST00000575599 ZNF101Q8IZC7 436 aa11.39□□□□□ -0.59
RPAIN-216ENST00000575599 LNX2Q8N448 690 aa11.39□□□□□ -0.59
RPAIN-216ENST00000575599 CYB561A3Q8NBI2 242 aa11.39□□□□□ -0.59
RPAIN-216ENST00000575599 OR1J1Q8NGS3 322 aa11.39□□□□□ -0.59
RPAIN-216ENST00000575599 OR4Q3Q8NH05 313 aa11.39□□□□□ -0.59
RPAIN-216ENST00000575599 TRUB1Q8WWH5 349 aaKnown RBP11.39□□□□□ -0.59
RPAIN-216ENST00000575599 FAM168AQ92567 244 aa11.39□□□□□ -0.59
RPAIN-216ENST00000575599 OTULINQ96BN8 352 aa11.39□□□□□ -0.59
RPAIN-216ENST00000575599 REG4Q9BYZ8 158 aa11.39□□□□□ -0.59
RPAIN-216ENST00000575599 RACGAP1Q9H0H5 632 aa11.39□□□□□ -0.59
RPAIN-216ENST00000575599 PLEK2Q9NYT0 353 aa11.39□□□□□ -0.59
RPAIN-216ENST00000575599 H2AFY2Q9P0M6 372 aaPredicted RBP11.39□□□□□ -0.59
RPAIN-216ENST00000575599 KLHL21Q9UJP4 597 aa11.39□□□□□ -0.59
RPAIN-216ENST00000575599 FBXO9Q9UK97 447 aaPredicted RBP11.39□□□□□ -0.59
RPAIN-216ENST00000575599 SYNGR3O43761 229 aa11.38□□□□□ -0.59
RPAIN-216ENST00000575599 HLA-DQA2P01906 255 aa11.38□□□□□ -0.59
RPAIN-216ENST00000575599 GNAO1P09471 354 aa11.38□□□□□ -0.59
RPAIN-216ENST00000575599 ZNF3P17036 446 aa11.38□□□□□ -0.59
RPAIN-216ENST00000575599 PAICSP22234 425 aaKnown RBP11.38□□□□□ -0.59
RPAIN-216ENST00000575599 EVX1P49640 407 aa11.38□□□□□ -0.59
RPAIN-216ENST00000575599 DSCR9P59020 149 aa11.38□□□□□ -0.59
RPAIN-216ENST00000575599 GLO1Q04760 184 aa11.38□□□□□ -0.59
RPAIN-216ENST00000575599 NKPD1Q17RQ9 610 aa11.38□□□□□ -0.59
RPAIN-216ENST00000575599 ACSM5Q6NUN0 579 aa11.38□□□□□ -0.59
RPAIN-216ENST00000575599 RFPL4BQ6ZWI9 263 aa11.38□□□□□ -0.59
RPAIN-216ENST00000575599 VASH1Q7L8A9 365 aaPredicted RBP11.38□□□□□ -0.59
RPAIN-216ENST00000575599 TCEANCQ8N8B7 351 aa11.38□□□□□ -0.59
RPAIN-216ENST00000575599 NPEPL1Q8NDH3 523 aa11.38□□□□□ -0.59
RPAIN-216ENST00000575599 PROKR2Q8NFJ6 384 aa11.38□□□□□ -0.59
RPAIN-216ENST00000575599 OR10H5Q8NGA6 315 aa11.38□□□□□ -0.59
RPAIN-216ENST00000575599 ABHD4Q8TB40 342 aa11.38□□□□□ -0.59
RPAIN-216ENST00000575599 Q96MT0 163 aa11.38□□□□□ -0.59
RPAIN-216ENST00000575599 WACQ9BTA9 647 aa11.38□□□□□ -0.59
RPAIN-216ENST00000575599 CLN6Q9NWW5 311 aa11.38□□□□□ -0.59
RPAIN-216ENST00000575599 SNTNA6NMZ2 147 aa11.37□□□□□ -0.59
RPAIN-216ENST00000575599 RER1O15258 196 aa11.37□□□□□ -0.59
RPAIN-216ENST00000575599 TLX2O43763 284 aaPredicted RBP11.37□□□□□ -0.59
RPAIN-216ENST00000575599 ABHD16AO95870 558 aa11.37□□□□□ -0.59
RPAIN-216ENST00000575599 CLPTM1O96005 669 aa11.37□□□□□ -0.59
RPAIN-216ENST00000575599 CSF3P09919 207 aa11.37□□□□□ -0.59
RPAIN-216ENST00000575599 NAT2P11245 290 aa11.37□□□□□ -0.59
RPAIN-216ENST00000575599 PYCR1P32322 319 aa11.37□□□□□ -0.59
RPAIN-216ENST00000575599 KLF3P57682 345 aaPredicted RBP11.37□□□□□ -0.59
RPAIN-216ENST00000575599 SELENOVP59797 346 aa11.37□□□□□ -0.59
RPAIN-216ENST00000575599 TEKQ02763 1124 aa11.37□□□□□ -0.59
RPAIN-216ENST00000575599 KCNMB1Q16558 191 aa11.37□□□□□ -0.59
RPAIN-216ENST00000575599 CORO6Q6QEF8 472 aa11.37□□□□□ -0.59
RPAIN-216ENST00000575599 UNQ6126/PRO20091Q6UXV3 157 aa11.37□□□□□ -0.59
RPAIN-216ENST00000575599 USP51Q70EK9 711 aa11.37□□□□□ -0.59
RPAIN-216ENST00000575599 ZBTB46Q86UZ6 589 aa11.37□□□□□ -0.59
RPAIN-216ENST00000575599 LINC00346Q8IVM7 164 aa11.37□□□□□ -0.59
RPAIN-216ENST00000575599 SLC37A3Q8NCC5 494 aa11.37□□□□□ -0.59
RPAIN-216ENST00000575599 SLC26A10Q8NG04 563 aa11.37□□□□□ -0.59
RPAIN-216ENST00000575599 OR8J1Q8NGP2 316 aa11.37□□□□□ -0.59
RPAIN-216ENST00000575599 OR9Q1Q8NGQ5 310 aa11.37□□□□□ -0.59
RPAIN-216ENST00000575599 SYNPRQ8TBG9 265 aa11.37□□□□□ -0.59
RPAIN-216ENST00000575599 SLC7A6Q92536 515 aa11.37□□□□□ -0.59
RPAIN-216ENST00000575599 IL4I1Q96RQ9 567 aa11.37□□□□□ -0.59
RPAIN-216ENST00000575599 TAAR3PQ9P1P4 343 aa11.37□□□□□ -0.59
RPAIN-216ENST00000575599 LHFPL6Q9Y693 200 aa11.37□□□□□ -0.59
RPAIN-216ENST00000575599 PRR23D1E9PI22 279 aaPredicted RBP11.36□□□□□ -0.59
RPAIN-216ENST00000575599 SURF4O15260 269 aa11.36□□□□□ -0.59
RPAIN-216ENST00000575599 LY6G6DO95868 133 aa11.36□□□□□ -0.59
RPAIN-216ENST00000575599 NGFP01138 241 aa11.36□□□□□ -0.59
RPAIN-216ENST00000575599 TFP02787 698 aa11.36□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms