RNA–Protein interactions for RNA: ENST00000575426.1

LITAF-217, Transcript of lipopolysaccharide induced TNF factor, humanhuman

TSL 5

Gene LITAF, Length 582 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LITAF-217ENST00000575426 MAP1AP78559 2803 aaPredicted RBP13.08□□□□□ -0.32
LITAF-217ENST00000575426 TMEM129A0AVI4 362 aa13.07□□□□□ -0.32
LITAF-217ENST00000575426 F5H5K5 113 aa13.07□□□□□ -0.32
LITAF-217ENST00000575426 PRKYO43930 277 aa13.07□□□□□ -0.32
LITAF-217ENST00000575426 MT-ND5P03915 603 aa13.07□□□□□ -0.32
LITAF-217ENST00000575426 ZNF250P15622 560 aa13.07□□□□□ -0.32
LITAF-217ENST00000575426 POLR2IP36954 125 aaKnown RBP13.07□□□□□ -0.32
LITAF-217ENST00000575426 NUDT6P53370 316 aa13.07□□□□□ -0.32
LITAF-217ENST00000575426 TPTEP56180 551 aa13.07□□□□□ -0.32
LITAF-217ENST00000575426 CDC42P60953 191 aa13.07□□□□□ -0.32
LITAF-217ENST00000575426 ERVS71-1P61550 626 aa13.07□□□□□ -0.32
LITAF-217ENST00000575426 APOFQ13790 326 aa13.07□□□□□ -0.32
LITAF-217ENST00000575426 EIF2B1Q14232 305 aaKnown RBP13.07□□□□□ -0.32
LITAF-217ENST00000575426 NKPD1Q17RQ9 610 aa13.07□□□□□ -0.32
LITAF-217ENST00000575426 ZIK1Q3SY52 487 aaPredicted RBP13.07□□□□□ -0.32
LITAF-217ENST00000575426 SPATA46Q5T0L3 261 aa13.07□□□□□ -0.32
LITAF-217ENST00000575426 LCN1P1Q5VSP4 162 aa13.07□□□□□ -0.32
LITAF-217ENST00000575426 LRP11Q86VZ4 500 aa13.07□□□□□ -0.32
LITAF-217ENST00000575426 ZNF101Q8IZC7 436 aa13.07□□□□□ -0.32
LITAF-217ENST00000575426 SLC25A40Q8TBP6 338 aa13.07□□□□□ -0.32
LITAF-217ENST00000575426 TMEM163Q8TC26 289 aa13.07□□□□□ -0.32
LITAF-217ENST00000575426 SNX33Q8WV41 574 aa13.07□□□□□ -0.32
LITAF-217ENST00000575426 SPTSSAQ969W0 71 aa13.07□□□□□ -0.32
LITAF-217ENST00000575426 CENPMQ9NSP4 180 aa13.07□□□□□ -0.32
LITAF-217ENST00000575426 H3BSA7 217 aa13.06□□□□□ -0.32
LITAF-217ENST00000575426 M0R233 179 aa13.06□□□□□ -0.32
LITAF-217ENST00000575426 SSX4O60224 188 aa13.06□□□□□ -0.32
LITAF-217ENST00000575426 ICMTO60725 284 aa13.06□□□□□ -0.32
LITAF-217ENST00000575426 CLPTM1O96005 669 aa13.06□□□□□ -0.32
LITAF-217ENST00000575426 NGFP01138 241 aa13.06□□□□□ -0.32
LITAF-217ENST00000575426 IGHV4-39P01824 125 aa13.06□□□□□ -0.32
LITAF-217ENST00000575426 ADRA2AP08913 450 aa13.06□□□□□ -0.32
LITAF-217ENST00000575426 DBHP09172 617 aa13.06□□□□□ -0.32
LITAF-217ENST00000575426 SLC15A1P46059 708 aa13.06□□□□□ -0.32
LITAF-217ENST00000575426 EFNA4P52798 201 aa13.06□□□□□ -0.32
LITAF-217ENST00000575426 RCN1Q15293 331 aa13.06□□□□□ -0.32
LITAF-217ENST00000575426 PCK2Q16822 640 aa13.06□□□□□ -0.32
LITAF-217ENST00000575426 RFPL4BQ6ZWI9 263 aa13.06□□□□□ -0.32
LITAF-217ENST00000575426 DPY19L4Q7Z388 723 aa13.06□□□□□ -0.32
LITAF-217ENST00000575426 TGIF2LYQ8IUE0 185 aa13.06□□□□□ -0.32
LITAF-217ENST00000575426 BBS1Q8NFJ9 593 aa13.06□□□□□ -0.32
LITAF-217ENST00000575426 APOBEC3DQ96AK3 386 aaPredicted RBP13.06□□□□□ -0.32
LITAF-217ENST00000575426 SLAMF6Q96DU3 332 aa13.06□□□□□ -0.32
LITAF-217ENST00000575426 MAP6Q96JE9 813 aa13.06□□□□□ -0.32
LITAF-217ENST00000575426 IL4I1Q96RQ9 567 aa13.06□□□□□ -0.32
LITAF-217ENST00000575426 TEAD3Q99594 435 aa13.06□□□□□ -0.32
LITAF-217ENST00000575426 COPS4Q9BT78 406 aa13.06□□□□□ -0.32
LITAF-217ENST00000575426 OR2J1Q9GZK6 312 aa13.06□□□□□ -0.32
LITAF-217ENST00000575426 MARCH7Q9H992 704 aa13.06□□□□□ -0.32
LITAF-217ENST00000575426 IMPAD1Q9NX62 359 aa13.06□□□□□ -0.32
LITAF-217ENST00000575426 TAAR3PQ9P1P4 343 aa13.06□□□□□ -0.32
LITAF-217ENST00000575426 STARD10Q9Y365 291 aa13.06□□□□□ -0.32
LITAF-217ENST00000575426 OTOGQ6ZRI0 2925 aa13.05□□□□□ -0.32
LITAF-217ENST00000575426 ITPR3Q14573 2671 aa13.05□□□□□ -0.32
LITAF-217ENST00000575426 ZNF878C9JN71 531 aa13.05□□□□□ -0.32
LITAF-217ENST00000575426 J3QW42 95 aa13.05□□□□□ -0.32
LITAF-217ENST00000575426 NDUFS7O75251 213 aa13.05□□□□□ -0.32
LITAF-217ENST00000575426 F12P00748 615 aaPredicted RBP13.05□□□□□ -0.32
LITAF-217ENST00000575426 ANPEPP15144 967 aa13.05□□□□□ -0.32
LITAF-217ENST00000575426 SLC2A5P22732 501 aa13.05□□□□□ -0.32
LITAF-217ENST00000575426 MSMPQ1L6U9 139 aa13.05□□□□□ -0.32
LITAF-217ENST00000575426 CLEC12BQ2HXU8 276 aa13.05□□□□□ -0.32
LITAF-217ENST00000575426 NXNL2Q5VZ03 156 aa13.05□□□□□ -0.32
LITAF-217ENST00000575426 MBNL2Q5VZF2 373 aaKnown RBP13.05□□□□□ -0.32
LITAF-217ENST00000575426 MEPCEQ7L2J0 689 aaKnown RBP13.05□□□□□ -0.32
LITAF-217ENST00000575426 GID4Q8IVV7 300 aa13.05□□□□□ -0.32
LITAF-217ENST00000575426 TIGD4Q8IY51 512 aa13.05□□□□□ -0.32
LITAF-217ENST00000575426 WFDC11Q8NEX6 87 aa13.05□□□□□ -0.32
LITAF-217ENST00000575426 OR8J1Q8NGP2 316 aa13.05□□□□□ -0.32
LITAF-217ENST00000575426 KLF14Q8TD94 323 aaPredicted RBP13.05□□□□□ -0.32
LITAF-217ENST00000575426 THEM6Q8WUY1 208 aa13.05□□□□□ -0.32
LITAF-217ENST00000575426 NEU4Q8WWR8 484 aaPredicted RBP13.05□□□□□ -0.32
LITAF-217ENST00000575426 MARS2Q96GW9 593 aaKnown RBP13.05□□□□□ -0.32
LITAF-217ENST00000575426 Q96MF0 132 aa13.05□□□□□ -0.32
LITAF-217ENST00000575426 PNRC2Q9NPJ4 139 aaKnown RBP13.05□□□□□ -0.32
LITAF-217ENST00000575426 IGLV3-9A0A075B6K5 115 aa13.04□□□□□ -0.32
LITAF-217ENST00000575426 PLSCR5A0PG75 271 aa13.04□□□□□ -0.32
LITAF-217ENST00000575426 SLC22A31A6NKX4 558 aa13.04□□□□□ -0.32
LITAF-217ENST00000575426 M0R129 80 aa13.04□□□□□ -0.32
LITAF-217ENST00000575426 M0R135 149 aa13.04□□□□□ -0.32
LITAF-217ENST00000575426 SELENOFO60613 162 aa13.04□□□□□ -0.32
LITAF-217ENST00000575426 IGHV3-13P01766 116 aa13.04□□□□□ -0.32
LITAF-217ENST00000575426 APOC1P02654 83 aa13.04□□□□□ -0.32
LITAF-217ENST00000575426 LCATP04180 440 aa13.04□□□□□ -0.32
LITAF-217ENST00000575426 LYNP07948 512 aa13.04□□□□□ -0.32
LITAF-217ENST00000575426 ACSM4P0C7M7 580 aa13.04□□□□□ -0.32
LITAF-217ENST00000575426 HSD11B1P28845 292 aa13.04□□□□□ -0.32
LITAF-217ENST00000575426 NAA10P41227 235 aaPredicted RBP13.04□□□□□ -0.32
LITAF-217ENST00000575426 ALDH3B1P43353 468 aa13.04□□□□□ -0.32
LITAF-217ENST00000575426 SLC6A9P48067 706 aa13.04□□□□□ -0.32
LITAF-217ENST00000575426 GRB2P62993 217 aaKnown RBP13.04□□□□□ -0.32
LITAF-217ENST00000575426 TRIP10Q15642 601 aa13.04□□□□□ -0.32
LITAF-217ENST00000575426 ALKBH6Q3KRA9 238 aa13.04□□□□□ -0.32
LITAF-217ENST00000575426 SPATC1Q76KD6 591 aa13.04□□□□□ -0.32
LITAF-217ENST00000575426 SLC16A9Q7RTY1 509 aa13.04□□□□□ -0.32
LITAF-217ENST00000575426 HIST2H2ABQ8IUE6 130 aaPredicted RBP13.04□□□□□ -0.32
LITAF-217ENST00000575426 ZNF454Q8N9F8 522 aa13.04□□□□□ -0.32
LITAF-217ENST00000575426 FAM81AQ8TBF8 368 aa13.04□□□□□ -0.32
LITAF-217ENST00000575426 TRUB1Q8WWH5 349 aaKnown RBP13.04□□□□□ -0.32
LITAF-217ENST00000575426 ZNF799Q96GE5 643 aa13.04□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms