RNA–Protein interactions for RNA: ENST00000573876.1

NPLOC4-214, Transcript of NPL4 homolog, ubiquitin recognition factor, humanhuman

TSL 4 BASIC

Gene NPLOC4, Length 560 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPLOC4-214ENST00000573876 EDARQ9UNE0 448 aa11.19□□□□□ -0.62
NPLOC4-214ENST00000573876 COPS3Q9UNS2 423 aa11.19□□□□□ -0.62
NPLOC4-214ENST00000573876 KLHDC2Q9Y2U9 406 aa11.19□□□□□ -0.62
NPLOC4-214ENST00000573876 TPRKBQ9Y3C4 175 aa11.19□□□□□ -0.62
NPLOC4-214ENST00000573876 SPEF1Q9Y4P9 236 aa11.19□□□□□ -0.62
NPLOC4-214ENST00000573876 TMEM14AQ9Y6G1 99 aa11.19□□□□□ -0.62
NPLOC4-214ENST00000573876 ATP23Q9Y6H3 246 aa11.19□□□□□ -0.62
NPLOC4-214ENST00000573876 HRNRQ86YZ3 2850 aaPredicted RBP11.19□□□□□ -0.62
NPLOC4-214ENST00000573876 IGHV2OR16-5A0A0B4J2B6 119 aa11.18□□□□□ -0.62
NPLOC4-214ENST00000573876 IRGMA1A4Y4 181 aa11.18□□□□□ -0.62
NPLOC4-214ENST00000573876 EFCAB10A6NFE3 127 aa11.18□□□□□ -0.62
NPLOC4-214ENST00000573876 VSTM5A8MXK1 200 aa11.18□□□□□ -0.62
NPLOC4-214ENST00000573876 PSMD9O00233 223 aa11.18□□□□□ -0.62
NPLOC4-214ENST00000573876 MAGEB4O15481 346 aaPredicted RBP11.18□□□□□ -0.62
NPLOC4-214ENST00000573876 DOK2O60496 412 aa11.18□□□□□ -0.62
NPLOC4-214ENST00000573876 CCDC159P0C7I6 412 aa11.18□□□□□ -0.62
NPLOC4-214ENST00000573876 CCL2P13500 99 aa11.18□□□□□ -0.62
NPLOC4-214ENST00000573876 CCNOP22674 350 aa11.18□□□□□ -0.62
NPLOC4-214ENST00000573876 STOMP27105 288 aa11.18□□□□□ -0.62
NPLOC4-214ENST00000573876 HTR5AP47898 357 aa11.18□□□□□ -0.62
NPLOC4-214ENST00000573876 GDI2P50395 445 aaKnown RBP11.18□□□□□ -0.62
NPLOC4-214ENST00000573876 GALK2Q01415 458 aa11.18□□□□□ -0.62
NPLOC4-214ENST00000573876 MVKQ03426 396 aa11.18□□□□□ -0.62
NPLOC4-214ENST00000573876 TAF13Q15543 124 aa11.18□□□□□ -0.62
NPLOC4-214ENST00000573876 RBM48Q5RL73 367 aaKnown RBP11.18□□□□□ -0.62
NPLOC4-214ENST00000573876 AHSA2Q719I0 299 aa11.18□□□□□ -0.62
NPLOC4-214ENST00000573876 VASH1Q7L8A9 365 aaPredicted RBP11.18□□□□□ -0.62
NPLOC4-214ENST00000573876 LHFPL3Q86UP9 236 aa11.18□□□□□ -0.62
NPLOC4-214ENST00000573876 HIST2H2ABQ8IUE6 130 aaPredicted RBP11.18□□□□□ -0.62
NPLOC4-214ENST00000573876 STX19Q8N4C7 294 aa11.18□□□□□ -0.62
NPLOC4-214ENST00000573876 ACBD7Q8N6N7 88 aa11.18□□□□□ -0.62
NPLOC4-214ENST00000573876 OR10S1Q8NGN2 331 aa11.18□□□□□ -0.62
NPLOC4-214ENST00000573876 OR1F12Q8NHA8 337 aa11.18□□□□□ -0.62
NPLOC4-214ENST00000573876 ST7LQ8TDW4 575 aa11.18□□□□□ -0.62
NPLOC4-214ENST00000573876 AKAP1Q92667 903 aaKnown RBP eCLIP11.18□□□□□ -0.623e-6■■■■□ 21.7
NPLOC4-214ENST00000573876 TMEM80Q96HE8 168 aa11.18□□□□□ -0.62
NPLOC4-214ENST00000573876 MNTQ99583 582 aa11.18□□□□□ -0.62
NPLOC4-214ENST00000573876 TTTY10Q9BZA0 68 aa11.18□□□□□ -0.62
NPLOC4-214ENST00000573876 UBTD1Q9HAC8 227 aa11.18□□□□□ -0.62
NPLOC4-214ENST00000573876 ATP6V1G2-DDX39BF2Z307 99 aa11.17□□□□□ -0.62
NPLOC4-214ENST00000573876 SYNGR3O43761 229 aa11.17□□□□□ -0.62
NPLOC4-214ENST00000573876 PLAUP00749 431 aa11.17□□□□□ -0.62
NPLOC4-214ENST00000573876 H2BFMP0C1H6 154 aa11.17□□□□□ -0.62
NPLOC4-214ENST00000573876 COX5BP10606 129 aa11.17□□□□□ -0.62
NPLOC4-214ENST00000573876 PRF1P14222 555 aa11.17□□□□□ -0.62
NPLOC4-214ENST00000573876 CRHBPP24387 322 aa11.17□□□□□ -0.62
NPLOC4-214ENST00000573876 DCKP27707 260 aa11.17□□□□□ -0.62
NPLOC4-214ENST00000573876 SPOCK1Q08629 439 aa11.17□□□□□ -0.62
NPLOC4-214ENST00000573876 RAB35Q15286 201 aa11.17□□□□□ -0.62
NPLOC4-214ENST00000573876 RSPO1Q2MKA7 263 aaPredicted RBP11.17□□□□□ -0.62
NPLOC4-214ENST00000573876 ZNF672Q499Z4 452 aaPredicted RBP11.17□□□□□ -0.62
NPLOC4-214ENST00000573876 KCTD18Q6PI47 426 aaPredicted RBP11.17□□□□□ -0.62
NPLOC4-214ENST00000573876 ARL9Q6T311 187 aa11.17□□□□□ -0.62
NPLOC4-214ENST00000573876 ZNF322Q6U7Q0 402 aaPredicted RBP11.17□□□□□ -0.62
NPLOC4-214ENST00000573876 UNQ6126/PRO20091Q6UXV3 157 aa11.17□□□□□ -0.62
NPLOC4-214ENST00000573876 SSX6Q7RTT6 188 aa11.17□□□□□ -0.62
NPLOC4-214ENST00000573876 KRT77Q7Z794 578 aa11.17□□□□□ -0.62
NPLOC4-214ENST00000573876 MYPOPQ86VE0 399 aaPredicted RBP11.17□□□□□ -0.62
NPLOC4-214ENST00000573876 ZNF584Q8IVC4 421 aa11.17□□□□□ -0.62
NPLOC4-214ENST00000573876 RFLNBQ8N5W9 214 aa11.17□□□□□ -0.62
NPLOC4-214ENST00000573876 KBTBD8Q8NFY9 601 aa11.17□□□□□ -0.62
NPLOC4-214ENST00000573876 SNX33Q8WV41 574 aa11.17□□□□□ -0.62
NPLOC4-214ENST00000573876 ASB17Q8WXJ9 295 aa11.17□□□□□ -0.62
NPLOC4-214ENST00000573876 SLC7A6Q92536 515 aa11.17□□□□□ -0.62
NPLOC4-214ENST00000573876 MYDGFQ969H8 173 aa11.17□□□□□ -0.62
NPLOC4-214ENST00000573876 COPS4Q9BT78 406 aa11.17□□□□□ -0.62
NPLOC4-214ENST00000573876 YTHDF1Q9BYJ9 559 aaKnown RBP11.17□□□□□ -0.62
NPLOC4-214ENST00000573876 HDHD2Q9H0R4 259 aa11.17□□□□□ -0.62
NPLOC4-214ENST00000573876 PNRC2Q9NPJ4 139 aaKnown RBP11.17□□□□□ -0.62
NPLOC4-214ENST00000573876 SLCO1C1Q9NYB5 712 aa11.17□□□□□ -0.62
NPLOC4-214ENST00000573876 CISD1Q9NZ45 108 aaKnown RBP11.17□□□□□ -0.62
NPLOC4-214ENST00000573876 CNOT2Q9NZN8 540 aaKnown RBP11.17□□□□□ -0.62
NPLOC4-214ENST00000573876 ERVK-18Q9QC07 812 aa11.17□□□□□ -0.62
NPLOC4-214ENST00000573876 EIF3KQ9UBQ5 218 aaKnown RBP11.17□□□□□ -0.62
NPLOC4-214ENST00000573876 LRBAP50851 2863 aa11.17□□□□□ -0.62
NPLOC4-214ENST00000573876 LOC100509620A0A075B734 347 aa11.16□□□□□ -0.62
NPLOC4-214ENST00000573876 C5orf49A4QMS7 147 aa11.16□□□□□ -0.62
NPLOC4-214ENST00000573876 SHISA9B4DS77 424 aa11.16□□□□□ -0.62
NPLOC4-214ENST00000573876 F5H5K5 113 aa11.16□□□□□ -0.62
NPLOC4-214ENST00000573876 HS3ST1O14792 307 aa11.16□□□□□ -0.62
NPLOC4-214ENST00000573876 PHYHO14832 338 aa11.16□□□□□ -0.62
NPLOC4-214ENST00000573876 ADRA2AP08913 450 aa11.16□□□□□ -0.62
NPLOC4-214ENST00000573876 DBHP09172 617 aa11.16□□□□□ -0.62
NPLOC4-214ENST00000573876 PIPP12273 146 aaPredicted RBP11.16□□□□□ -0.62
NPLOC4-214ENST00000573876 EEF1B2P24534 225 aaKnown RBP11.16□□□□□ -0.62
NPLOC4-214ENST00000573876 C21orf33P30042 268 aaPredicted RBP11.16□□□□□ -0.62
NPLOC4-214ENST00000573876 CALCRP30988 508 aa11.16□□□□□ -0.62
NPLOC4-214ENST00000573876 ETV1P50549 477 aa11.16□□□□□ -0.62
NPLOC4-214ENST00000573876 ACTC1P68032 377 aa11.16□□□□□ -0.62
NPLOC4-214ENST00000573876 ACTA1P68133 377 aa11.16□□□□□ -0.62
NPLOC4-214ENST00000573876 ZNF85Q03923 595 aa11.16□□□□□ -0.62
NPLOC4-214ENST00000573876 ECH1Q13011 328 aa11.16□□□□□ -0.62
NPLOC4-214ENST00000573876 LRRN1Q6UXK5 716 aa11.16□□□□□ -0.62
NPLOC4-214ENST00000573876 NAA40Q86UY6 237 aa11.16□□□□□ -0.62
NPLOC4-214ENST00000573876 RNF133Q8WVZ7 376 aa11.16□□□□□ -0.62
NPLOC4-214ENST00000573876 IPCEF1Q8WWN9 437 aaPredicted RBP11.16□□□□□ -0.62
NPLOC4-214ENST00000573876 SGCDQ92629 289 aa11.16□□□□□ -0.62
NPLOC4-214ENST00000573876 FBXW5Q969U6 566 aa11.16□□□□□ -0.62
NPLOC4-214ENST00000573876 POM121L2Q96KW2 1035 aa11.16□□□□□ -0.62
NPLOC4-214ENST00000573876 COQ7Q99807 217 aa11.16□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms