RNA–Protein interactions for RNA: ENST00000573584.5

NUP88-207, Transcript of nucleoporin 88, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NUP88, Length 2,916 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP88-207ENST00000573584 ISG15P05161 165 aa14□□□□□ -0.17
NUP88-207ENST00000573584 DCAF7P61962 342 aa14□□□□□ -0.17
NUP88-207ENST00000573584 IL13RA1P78552 427 aa14□□□□□ -0.17
NUP88-207ENST00000573584 PAN3Q58A45 887 aaKnown RBP14□□□□□ -0.17
NUP88-207ENST00000573584 ZNF704Q6ZNC4 412 aaPredicted RBP14□□□□□ -0.17
NUP88-207ENST00000573584 RHOUQ7L0Q8 258 aa14□□□□□ -0.17
NUP88-207ENST00000573584 LINC00346Q8IVM7 164 aa14□□□□□ -0.17
NUP88-207ENST00000573584 C9orf40Q8IXQ3 194 aa14□□□□□ -0.17
NUP88-207ENST00000573584 GVQW1Q8N7I0 195 aa14□□□□□ -0.17
NUP88-207ENST00000573584 BOLLQ8N9W6 283 aaKnown RBP14□□□□□ -0.17
NUP88-207ENST00000573584 PHYHIPLQ96FC7 376 aa14□□□□□ -0.17
NUP88-207ENST00000573584 ZNF416Q9BWM5 594 aa14□□□□□ -0.17
NUP88-207ENST00000573584 SLC2A8Q9NY64 477 aa14□□□□□ -0.17
NUP88-207ENST00000573584 RAB22AQ9UL26 194 aa14□□□□□ -0.17
NUP88-207ENST00000573584 A0A1W2PQD3 144 aa13.99□□□□□ -0.17
NUP88-207ENST00000573584 WIPF3A6NGB9 483 aa13.99□□□□□ -0.17
NUP88-207ENST00000573584 RAB27BO00194 218 aa13.99□□□□□ -0.17
NUP88-207ENST00000573584 P2RY10O00398 339 aa13.99□□□□□ -0.17
NUP88-207ENST00000573584 AHSA1O95433 338 aa13.99□□□□□ -0.17
NUP88-207ENST00000573584 GP1BAP07359 652 aa13.99□□□□□ -0.17
NUP88-207ENST00000573584 AVPR2P30518 371 aa13.99□□□□□ -0.17
NUP88-207ENST00000573584 SNTB1Q13884 538 aaKnown RBP13.99□□□□□ -0.17
NUP88-207ENST00000573584 ZNF260Q3ZCT1 412 aa13.99□□□□□ -0.17
NUP88-207ENST00000573584 OR52W1Q6IF63 320 aa13.99□□□□□ -0.17
NUP88-207ENST00000573584 RAB12Q6IQ22 244 aa13.99□□□□□ -0.17
NUP88-207ENST00000573584 NKAIN3Q8N8D7 197 aa13.99□□□□□ -0.17
NUP88-207ENST00000573584 ZNF248Q8NDW4 579 aa13.99□□□□□ -0.17
NUP88-207ENST00000573584 GAREM1Q9H706 876 aa13.99□□□□□ -0.17
NUP88-207ENST00000573584 CNTD2Q9H8S5 307 aa13.99□□□□□ -0.17
NUP88-207ENST00000573584 PCDHB16Q9NRJ7 776 aa13.99□□□□□ -0.17
NUP88-207ENST00000573584 CUTCQ9NTM9 273 aa13.99□□□□□ -0.17
NUP88-207ENST00000573584 CYB5R1Q9UHQ9 305 aa13.99□□□□□ -0.17
NUP88-207ENST00000573584 KIF26BQ2KJY2 2108 aa13.99□□□□□ -0.17
NUP88-207ENST00000573584 FAM74A7A6NL05 159 aa13.99□□□□□ -0.17
NUP88-207ENST00000573584 HLA-GP17693 338 aa13.99□□□□□ -0.17
NUP88-207ENST00000573584 FASLGP48023 281 aa13.99□□□□□ -0.17
NUP88-207ENST00000573584 CCR5P51681 352 aa13.99□□□□□ -0.17
NUP88-207ENST00000573584 PRKXP51817 358 aa13.99□□□□□ -0.17
NUP88-207ENST00000573584 ELAVL1Q15717 326 aaKnown RBP13.99□□□□□ -0.17
NUP88-207ENST00000573584 FAM74A3Q4VXF1 159 aa13.99□□□□□ -0.17
NUP88-207ENST00000573584 LYPD6Q86Y78 171 aa13.99□□□□□ -0.17
NUP88-207ENST00000573584 CLRN3Q8NCR9 226 aa13.99□□□□□ -0.17
NUP88-207ENST00000573584 THAP6Q8TBB0 222 aa13.99□□□□□ -0.17
NUP88-207ENST00000573584 MITD1Q8WV92 249 aa13.99□□□□□ -0.17
NUP88-207ENST00000573584 FOXRED1Q96CU9 486 aaPredicted RBP13.99□□□□□ -0.17
NUP88-207ENST00000573584 PHB2Q99623 299 aa13.99□□□□□ -0.17
NUP88-207ENST00000573584 SLC6A15Q9H2J7 730 aa13.99□□□□□ -0.17
NUP88-207ENST00000573584 CENPMQ9NSP4 180 aa13.99□□□□□ -0.17
NUP88-207ENST00000573584 FREM3P0C091 2139 aa13.98□□□□□ -0.17
NUP88-207ENST00000573584 IGKV3D-11A0A0A0MRZ8 115 aa13.98□□□□□ -0.17
NUP88-207ENST00000573584 C9orf170A2RU37 121 aa13.98□□□□□ -0.17
NUP88-207ENST00000573584 CPED1A4D0V7 1026 aa13.98□□□□□ -0.17
NUP88-207ENST00000573584 C10orf142B7Z368 130 aa13.98□□□□□ -0.17
NUP88-207ENST00000573584 F5H0A9 414 aaPredicted RBP13.98□□□□□ -0.17
NUP88-207ENST00000573584 IGHMP01871 453 aa13.98□□□□□ -0.17
NUP88-207ENST00000573584 RAB6AP20340 208 aa13.98□□□□□ -0.17
NUP88-207ENST00000573584 SLC26A5P58743 744 aa13.98□□□□□ -0.17
NUP88-207ENST00000573584 PPIAP62937 165 aaKnown RBP13.98□□□□□ -0.17
NUP88-207ENST00000573584 FMODQ06828 376 aa13.98□□□□□ -0.17
NUP88-207ENST00000573584 SLC22A6Q4U2R8 563 aa13.98□□□□□ -0.17
NUP88-207ENST00000573584 PHF19Q5T6S3 580 aa13.98□□□□□ -0.17
NUP88-207ENST00000573584 TMEM244Q5VVB8 128 aa13.98□□□□□ -0.17
NUP88-207ENST00000573584 GRINAQ7Z429 371 aa13.98□□□□□ -0.17
NUP88-207ENST00000573584 HIST2H2ABQ8IUE6 130 aaPredicted RBP13.98□□□□□ -0.17
NUP88-207ENST00000573584 INO80EQ8NBZ0 244 aaPredicted RBP13.98□□□□□ -0.17
NUP88-207ENST00000573584 SLC26A10Q8NG04 563 aa13.98□□□□□ -0.17
NUP88-207ENST00000573584 CASTOR1Q8WTX7 329 aa13.98□□□□□ -0.17
NUP88-207ENST00000573584 FAM46BQ96A09 425 aa13.98□□□□□ -0.17
NUP88-207ENST00000573584 MRGPRFQ96AM1 343 aa13.98□□□□□ -0.17
NUP88-207ENST00000573584 FGGYQ96C11 551 aa13.98□□□□□ -0.17
NUP88-207ENST00000573584 GPR27Q9NS67 375 aa13.98□□□□□ -0.17
NUP88-207ENST00000573584 LOC101059948A0A1B0GTJ6 334 aa13.98□□□□□ -0.17
NUP88-207ENST00000573584 STK17BO94768 372 aa13.98□□□□□ -0.17
NUP88-207ENST00000573584 VAMP1P23763 118 aa13.98□□□□□ -0.17
NUP88-207ENST00000573584 ABCD3P28288 659 aa13.98□□□□□ -0.17
NUP88-207ENST00000573584 CASRP41180 1078 aa13.98□□□□□ -0.17
NUP88-207ENST00000573584 KCTD9Q7L273 389 aa13.98□□□□□ -0.17
NUP88-207ENST00000573584 GPR119Q8TDV5 335 aa13.98□□□□□ -0.17
NUP88-207ENST00000573584 ST7LQ8TDW4 575 aa13.98□□□□□ -0.17
NUP88-207ENST00000573584 NUDCD2Q8WVJ2 157 aa13.98□□□□□ -0.17
NUP88-207ENST00000573584 NPAS1Q99742 590 aa13.98□□□□□ -0.17
NUP88-207ENST00000573584 NKX6-2Q9C056 277 aaPredicted RBP13.98□□□□□ -0.17
NUP88-207ENST00000573584 DHCR7Q9UBM7 475 aaKnown RBP13.98□□□□□ -0.17
NUP88-207ENST00000573584 MMP17Q9ULZ9 603 aa13.98□□□□□ -0.17
NUP88-207ENST00000573584 TMEM131Q92545 1883 aa13.98□□□□□ -0.17
NUP88-207ENST00000573584 MPTX1A8MV57 137 aa13.97□□□□□ -0.17
NUP88-207ENST00000573584 OR2T1O43869 369 aa13.97□□□□□ -0.17
NUP88-207ENST00000573584 IL2RAP01589 272 aa13.97□□□□□ -0.17
NUP88-207ENST00000573584 IL11P20809 199 aa13.97□□□□□ -0.17
NUP88-207ENST00000573584 GNALP38405 381 aa13.97□□□□□ -0.17
NUP88-207ENST00000573584 CD96P40200 585 aa13.97□□□□□ -0.17
NUP88-207ENST00000573584 PDSS1Q5T2R2 415 aa13.97□□□□□ -0.17
NUP88-207ENST00000573584 CCDC36Q8IYA8 594 aa13.97□□□□□ -0.17
NUP88-207ENST00000573584 PRSS58Q8IYP2 241 aa13.97□□□□□ -0.17
NUP88-207ENST00000573584 PAQR4Q8N4S7 273 aaPredicted RBP13.97□□□□□ -0.17
NUP88-207ENST00000573584 ZDHHC22Q8N966 263 aa13.97□□□□□ -0.17
NUP88-207ENST00000573584 WWTR1Q9GZV5 400 aa13.97□□□□□ -0.17
NUP88-207ENST00000573584 PIGMQ9H3S5 423 aa13.97□□□□□ -0.17
NUP88-207ENST00000573584 RHBDD3Q9Y3P4 386 aa13.97□□□□□ -0.17
NUP88-207ENST00000573584 EEF1E1-BLOC1S5C9J1V9 151 aa13.97□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms