RNA–Protein interactions for RNA: ENST00000573166.5

SMG6-213, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 1 (best)

Gene SMG6, Length 4,236 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-213ENST00000573166 ZNF385CQ66K41 422 aaPredicted RBP9□□□□□ -0.97
SMG6-213ENST00000573166 UNQ6494/PRO21346Q6UXR6 183 aa9□□□□□ -0.97
SMG6-213ENST00000573166 FJX1Q86VR8 437 aa9□□□□□ -0.97
SMG6-213ENST00000573166 SYS1Q8N2H4 156 aa9□□□□□ -0.97
SMG6-213ENST00000573166 OR5T2Q8NGG2 359 aa9□□□□□ -0.97
SMG6-213ENST00000573166 OTOSQ8NHW6 89 aa9□□□□□ -0.97
SMG6-213ENST00000573166 PPP1R35Q8TAP8 253 aa9□□□□□ -0.97
SMG6-213ENST00000573166 SUN5Q8TC36 379 aa9□□□□□ -0.97
SMG6-213ENST00000573166 NINJ1Q92982 152 aa9□□□□□ -0.97
SMG6-213ENST00000573166 GPN1Q9HCN4 374 aaPredicted RBP9□□□□□ -0.97
SMG6-213ENST00000573166 REV1Q9UBZ9 1251 aa9□□□□□ -0.97
SMG6-213ENST00000573166 KCNN3Q9UGI6 736 aa9□□□□□ -0.97
SMG6-213ENST00000573166 SLC22A13Q9Y226 551 aa9□□□□□ -0.97
SMG6-213ENST00000573166 TRAV18A0A075B6X5 111 aa9□□□□□ -0.97
SMG6-213ENST00000573166 LOC100509620A0A075B734 347 aa9□□□□□ -0.97
SMG6-213ENST00000573166 ZNF35P13682 527 aa9□□□□□ -0.97
SMG6-213ENST00000573166 SHC1P29353 583 aa9□□□□□ -0.97
SMG6-213ENST00000573166 LIPAP38571 399 aa9□□□□□ -0.97
SMG6-213ENST00000573166 EGR3Q06889 387 aa9□□□□□ -0.97
SMG6-213ENST00000573166 SEMA6DQ8NFY4 1073 aa9□□□□□ -0.97
SMG6-213ENST00000573166 SLC39A7Q92504 469 aa9□□□□□ -0.97
SMG6-213ENST00000573166 FOXRED1Q96CU9 486 aaPredicted RBP9□□□□□ -0.97
SMG6-213ENST00000573166 ZNF416Q9BWM5 594 aa9□□□□□ -0.97
SMG6-213ENST00000573166 CDCA4Q9BXL8 241 aa9□□□□□ -0.97
SMG6-213ENST00000573166 FAM172BPA6NC97 362 aa9□□□□□ -0.97
SMG6-213ENST00000573166 AHRRA9YTQ3 701 aa9□□□□□ -0.97
SMG6-213ENST00000573166 NOS1APO75052 506 aaPredicted RBP9□□□□□ -0.97
SMG6-213ENST00000573166 RBBP9O75884 186 aa9□□□□□ -0.97
SMG6-213ENST00000573166 SULT1C4O75897 302 aa9□□□□□ -0.97
SMG6-213ENST00000573166 UBL3O95164 117 aa9□□□□□ -0.97
SMG6-213ENST00000573166 SERPINA2P20848 420 aa9□□□□□ -0.97
SMG6-213ENST00000573166 BDKRB2P30411 391 aa9□□□□□ -0.97
SMG6-213ENST00000573166 YIF1BQ5BJH7 314 aa9□□□□□ -0.97
SMG6-213ENST00000573166 MESTQ5EB52 335 aa9□□□□□ -0.97
SMG6-213ENST00000573166 LYPD4Q6UWN0 246 aa9□□□□□ -0.97
SMG6-213ENST00000573166 DBX2Q6ZNG2 339 aa9□□□□□ -0.97
SMG6-213ENST00000573166 CELF2-AS1Q8N7Q2 184 aa9□□□□□ -0.97
SMG6-213ENST00000573166 ASB10Q8WXI3 467 aa9□□□□□ -0.97
SMG6-213ENST00000573166 PIGTQ969N2 578 aa9□□□□□ -0.97
SMG6-213ENST00000573166 WACQ9BTA9 647 aa9□□□□□ -0.97
SMG6-213ENST00000573166 GPR84Q9NQS5 396 aa9□□□□□ -0.97
SMG6-213ENST00000573166 AKAP6Q13023 2319 aa8.99□□□□□ -0.97
SMG6-213ENST00000573166 IGHV3-64DA0A0J9YX35 117 aa8.99□□□□□ -0.97
SMG6-213ENST00000573166 AGFG2O95081 481 aa8.99□□□□□ -0.97
SMG6-213ENST00000573166 MPZL1O95297 269 aa8.99□□□□□ -0.97
SMG6-213ENST00000573166 CELA3AP09093 270 aa8.99□□□□□ -0.97
SMG6-213ENST00000573166 ZNF718Q3SXZ3 478 aa8.99□□□□□ -0.97
SMG6-213ENST00000573166 ZMAT1Q5H9K5 638 aa8.99□□□□□ -0.97
SMG6-213ENST00000573166 ZNF517Q6ZMY9 492 aaPredicted RBP8.99□□□□□ -0.97
SMG6-213ENST00000573166 DOK3Q7L591 496 aa8.99□□□□□ -0.97
SMG6-213ENST00000573166 SERPINA12Q8IW75 414 aa8.99□□□□□ -0.97
SMG6-213ENST00000573166 OR1F12Q8NHA8 337 aa8.99□□□□□ -0.97
SMG6-213ENST00000573166 GMPPAQ96IJ6 420 aaPredicted RBP8.99□□□□□ -0.97
SMG6-213ENST00000573166 BCL7BQ9BQE9 202 aa8.99□□□□□ -0.97
SMG6-213ENST00000573166 OR14J1Q9UGF5 321 aa8.99□□□□□ -0.97
SMG6-213ENST00000573166 NEUROG3Q9Y4Z2 214 aa8.99□□□□□ -0.97
SMG6-213ENST00000573166 A0A0G2JMM0 328 aa8.99□□□□□ -0.97
SMG6-213ENST00000573166 A0A1W2PPB8 328 aa8.99□□□□□ -0.97
SMG6-213ENST00000573166 A0A1W2PRS3 328 aa8.99□□□□□ -0.97
SMG6-213ENST00000573166 HSPB2A8KAH6 182 aa8.99□□□□□ -0.97
SMG6-213ENST00000573166 KIR3DP1A8MWS1 328 aa8.99□□□□□ -0.97
SMG6-213ENST00000573166 FAM25EA8MYX2 175 aa8.99□□□□□ -0.97
SMG6-213ENST00000573166 BHLHE40O14503 412 aa8.99□□□□□ -0.97
SMG6-213ENST00000573166 WDR1O75083 606 aa8.99□□□□□ -0.97
SMG6-213ENST00000573166 PSKH1P11801 424 aa8.99□□□□□ -0.97
SMG6-213ENST00000573166 RAD52P43351 418 aa8.99□□□□□ -0.97
SMG6-213ENST00000573166 CBX5P45973 191 aa8.99□□□□□ -0.97
SMG6-213ENST00000573166 RTP5Q14D33 572 aa8.99□□□□□ -0.97
SMG6-213ENST00000573166 HSPB2Q16082 182 aa8.99□□□□□ -0.97
SMG6-213ENST00000573166 PABPC1L2AQ5JQF8 200 aa8.99□□□□□ -0.97
SMG6-213ENST00000573166 SPATA46Q5T0L3 261 aa8.99□□□□□ -0.97
SMG6-213ENST00000573166 CREB3L2Q70SY1 520 aa8.99□□□□□ -0.97
SMG6-213ENST00000573166 OR11L1Q8NGX0 322 aa8.99□□□□□ -0.97
SMG6-213ENST00000573166 RNF170Q96K19 258 aa8.99□□□□□ -0.97
SMG6-213ENST00000573166 MOB1AQ9H8S9 216 aa8.99□□□□□ -0.97
SMG6-213ENST00000573166 DECR2Q9NUI1 292 aa8.99□□□□□ -0.97
SMG6-213ENST00000573166 RCE1Q9Y256 329 aa8.99□□□□□ -0.97
SMG6-213ENST00000573166 TRIM64CA6NLI5 447 aa8.99□□□□□ -0.97
SMG6-213ENST00000573166 GRPP07492 148 aa8.99□□□□□ -0.97
SMG6-213ENST00000573166 CAV3P56539 151 aa8.99□□□□□ -0.97
SMG6-213ENST00000573166 ZNF121P58317 390 aaPredicted RBP8.99□□□□□ -0.97
SMG6-213ENST00000573166 ZNF45Q02386 682 aa8.99□□□□□ -0.97
SMG6-213ENST00000573166 ABCA11PQ4W5N1 156 aa8.99□□□□□ -0.97
SMG6-213ENST00000573166 STEAP3Q658P3 488 aa8.99□□□□□ -0.97
SMG6-213ENST00000573166 MTFR2Q6P444 385 aa8.99□□□□□ -0.97
SMG6-213ENST00000573166 ZNF782Q6ZMW2 699 aaPredicted RBP8.99□□□□□ -0.97
SMG6-213ENST00000573166 ZNF584Q8IVC4 421 aa8.99□□□□□ -0.97
SMG6-213ENST00000573166 FAM71CQ8NEG0 241 aa8.99□□□□□ -0.97
SMG6-213ENST00000573166 STEAP2Q8NFT2 490 aa8.99□□□□□ -0.97
SMG6-213ENST00000573166 OR6Q1Q8NGQ2 317 aa8.99□□□□□ -0.97
SMG6-213ENST00000573166 OR6S1Q8NH40 331 aa8.99□□□□□ -0.97
SMG6-213ENST00000573166 FCAMRQ8WWV6 532 aa8.99□□□□□ -0.97
SMG6-213ENST00000573166 CENPOQ9BU64 300 aa8.99□□□□□ -0.97
SMG6-213ENST00000573166 FGF20Q9NP95 211 aaPredicted RBP8.99□□□□□ -0.97
SMG6-213ENST00000573166 SERPINA5P05154 406 aa8.98□□□□□ -0.97
SMG6-213ENST00000573166 ACHEP22303 614 aa8.98□□□□□ -0.97
SMG6-213ENST00000573166 APEX1P27695 318 aaKnown RBP8.98□□□□□ -0.97
SMG6-213ENST00000573166 CLDN12P56749 244 aa8.98□□□□□ -0.97
SMG6-213ENST00000573166 CCDC58Q4VC31 144 aa8.98□□□□□ -0.97
SMG6-213ENST00000573166 SPIN3Q5JUX0 258 aa8.98□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 57.6 ms