RNA–Protein interactions for RNA: ENST00000572579.1

CHD3-214, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 2

Gene CHD3, Length 931 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-214ENST00000572579 TUBG2Q9NRH3 451 aa15.24■□□□□ 0.03
CHD3-214ENST00000572579 PTTG3PQ9NZH4 202 aa15.24■□□□□ 0.03
CHD3-214ENST00000572579 PCDHB10Q9UN67 800 aa15.24■□□□□ 0.03
CHD3-214ENST00000572579 J3QLI3 93 aa15.23■□□□□ 0.03
CHD3-214ENST00000572579 RAC2P15153 192 aa15.23■□□□□ 0.03
CHD3-214ENST00000572579 HIST1H1CP16403 213 aaKnown RBP15.23■□□□□ 0.03
CHD3-214ENST00000572579 CFPP27918 469 aa15.23■□□□□ 0.03
CHD3-214ENST00000572579 PMELP40967 661 aa15.23■□□□□ 0.03
CHD3-214ENST00000572579 SLC6A9P48067 706 aa15.23■□□□□ 0.03
CHD3-214ENST00000572579 PRSS12P56730 875 aa15.23■□□□□ 0.03
CHD3-214ENST00000572579 SLC3A1Q07837 685 aa15.23■□□□□ 0.03
CHD3-214ENST00000572579 FBXW12Q6X9E4 464 aa15.23■□□□□ 0.03
CHD3-214ENST00000572579 CFAP77Q6ZQR2 320 aa15.23■□□□□ 0.03
CHD3-214ENST00000572579 COLCA1Q6ZS62 124 aa15.23■□□□□ 0.03
CHD3-214ENST00000572579 ZDHHC22Q8N966 263 aa15.23■□□□□ 0.03
CHD3-214ENST00000572579 OR4K13Q8NH42 304 aa15.23■□□□□ 0.03
CHD3-214ENST00000572579 C22orf15Q8WYQ4 148 aa15.23■□□□□ 0.03
CHD3-214ENST00000572579 OR2V2Q96R30 315 aa15.23■□□□□ 0.03
CHD3-214ENST00000572579 DDOQ99489 341 aa15.23■□□□□ 0.03
CHD3-214ENST00000572579 OR52D1Q9H346 318 aa15.23■□□□□ 0.03
CHD3-214ENST00000572579 GCM1Q9NP62 436 aa15.23■□□□□ 0.03
CHD3-214ENST00000572579 PNRC2Q9NPJ4 139 aaKnown RBP15.23■□□□□ 0.03
CHD3-214ENST00000572579 ARL8BQ9NVJ2 186 aa15.23■□□□□ 0.03
CHD3-214ENST00000572579 SAMD4AQ9UPU9 718 aaKnown RBP15.23■□□□□ 0.03
CHD3-214ENST00000572579 AURKCQ9UQB9 309 aa15.23■□□□□ 0.03
CHD3-214ENST00000572579 IGHV3-64DA0A0J9YX35 117 aa15.22■□□□□ 0.03
CHD3-214ENST00000572579 OR6C68A6NDL8 312 aa15.22■□□□□ 0.03
CHD3-214ENST00000572579 F5H0A9 414 aaPredicted RBP15.22■□□□□ 0.03
CHD3-214ENST00000572579 TMEM178BH3BS89 294 aa15.22■□□□□ 0.03
CHD3-214ENST00000572579 ARPC3O15145 178 aa15.22■□□□□ 0.03
CHD3-214ENST00000572579 HSD17B1P14061 328 aa15.22■□□□□ 0.03
CHD3-214ENST00000572579 COX10Q12887 443 aa15.22■□□□□ 0.03
CHD3-214ENST00000572579 ZMAT1Q5H9K5 638 aa15.22■□□□□ 0.03
CHD3-214ENST00000572579 KLF17Q5JT82 389 aaPredicted RBP15.22■□□□□ 0.03
CHD3-214ENST00000572579 LEG1Q6P5S2 330 aa15.22■□□□□ 0.03
CHD3-214ENST00000572579 SLC26A10Q8NG04 563 aa15.22■□□□□ 0.03
CHD3-214ENST00000572579 ZNRF4Q8WWF5 429 aa15.22■□□□□ 0.03
CHD3-214ENST00000572579 WDR76Q9H967 626 aa15.22■□□□□ 0.03
CHD3-214ENST00000572579 PATZ1Q9HBE1 687 aaKnown RBP15.22■□□□□ 0.03
CHD3-214ENST00000572579 IL19Q9UHD0 177 aa15.22■□□□□ 0.03
CHD3-214ENST00000572579 POLR3KQ9Y2Y1 108 aaPredicted RBP15.22■□□□□ 0.03
CHD3-214ENST00000572579 PPIAL4EA0A075B759 164 aa15.21■□□□□ 0.03
CHD3-214ENST00000572579 PPIAL4CA0A0B4J2A2 164 aa15.21■□□□□ 0.03
CHD3-214ENST00000572579 A0A1B0GWJ7 208 aa15.21■□□□□ 0.03
CHD3-214ENST00000572579 PPIAL4DF5H284 164 aa15.21■□□□□ 0.03
CHD3-214ENST00000572579 HAX1O00165 279 aa15.21■□□□□ 0.03
CHD3-214ENST00000572579 MLNRO43193 412 aa15.21■□□□□ 0.03
CHD3-214ENST00000572579 ZNF205O95201 554 aa15.21■□□□□ 0.03
CHD3-214ENST00000572579 PPIAL4FP0DN26 164 aa15.21■□□□□ 0.03
CHD3-214ENST00000572579 PSKH1P11801 424 aa15.21■□□□□ 0.03
CHD3-214ENST00000572579 SELEP16581 610 aa15.21■□□□□ 0.03
CHD3-214ENST00000572579 FPR3P25089 353 aa15.21■□□□□ 0.03
CHD3-214ENST00000572579 GGT2P36268 569 aa15.21■□□□□ 0.03
CHD3-214ENST00000572579 GSSP48637 474 aa15.21■□□□□ 0.03
CHD3-214ENST00000572579 CENPAP49450 140 aa15.21■□□□□ 0.03
CHD3-214ENST00000572579 MMP16P51512 607 aa15.21■□□□□ 0.03
CHD3-214ENST00000572579 RPS6KA3P51812 740 aa15.21■□□□□ 0.03
CHD3-214ENST00000572579 GYS2P54840 703 aa15.21■□□□□ 0.03
CHD3-214ENST00000572579 BTG1P62324 171 aa15.21■□□□□ 0.03
CHD3-214ENST00000572579 TMEM155Q4W5P6 130 aa15.21■□□□□ 0.03
CHD3-214ENST00000572579 ZNF362Q5T0B9 420 aaPredicted RBP15.21■□□□□ 0.03
CHD3-214ENST00000572579 SLC18B1Q6NT16 456 aa15.21■□□□□ 0.03
CHD3-214ENST00000572579 ZBTB46Q86UZ6 589 aa15.21■□□□□ 0.03
CHD3-214ENST00000572579 LINC00346Q8IVM7 164 aa15.21■□□□□ 0.03
CHD3-214ENST00000572579 OR8G5Q8NG78 346 aa15.21■□□□□ 0.03
CHD3-214ENST00000572579 OR10AD1Q8NGE0 317 aa15.21■□□□□ 0.03
CHD3-214ENST00000572579 ZNF420Q8TAQ5 688 aaPredicted RBP15.21■□□□□ 0.03
CHD3-214ENST00000572579 NANPQ8TBE9 248 aa15.21■□□□□ 0.03
CHD3-214ENST00000572579 ZNF418Q8TF45 676 aaPredicted RBP15.21■□□□□ 0.03
CHD3-214ENST00000572579 FAM216AQ8WUB2 273 aa15.21■□□□□ 0.03
CHD3-214ENST00000572579 MEGF10Q96KG7 1140 aa15.21■□□□□ 0.03
CHD3-214ENST00000572579 CDRT15Q96T59 188 aa15.21■□□□□ 0.03
CHD3-214ENST00000572579 COQ7Q99807 217 aa15.21■□□□□ 0.03
CHD3-214ENST00000572579 FN3KQ9H479 309 aa15.21■□□□□ 0.03
CHD3-214ENST00000572579 MRPL22Q9NWU5 206 aaKnown RBP15.21■□□□□ 0.03
CHD3-214ENST00000572579 PPP1R3CQ9UQK1 317 aa15.21■□□□□ 0.03
CHD3-214ENST00000572579 TRRAPQ9Y4A5 3859 aa15.2■□□□□ 0.02
CHD3-214ENST00000572579 TMEM89A2RUT3 159 aa15.2■□□□□ 0.02
CHD3-214ENST00000572579 C5orf63A6NC05 138 aa15.2■□□□□ 0.02
CHD3-214ENST00000572579 ARPC2O15144 300 aa15.2■□□□□ 0.02
CHD3-214ENST00000572579 GADD45GO95257 159 aa15.2■□□□□ 0.02
CHD3-214ENST00000572579 GATA3P23771 443 aa15.2■□□□□ 0.02
CHD3-214ENST00000572579 COMPP49747 757 aaPredicted RBP15.2■□□□□ 0.02
CHD3-214ENST00000572579 HOXA4Q00056 320 aaPredicted RBP15.2■□□□□ 0.02
CHD3-214ENST00000572579 SPIBQ01892 262 aa15.2■□□□□ 0.02
CHD3-214ENST00000572579 PAX2Q02962 417 aa15.2■□□□□ 0.02
CHD3-214ENST00000572579 ZNF154Q13106 437 aa15.2■□□□□ 0.02
CHD3-214ENST00000572579 PGBD2Q6P3X8 592 aa15.2■□□□□ 0.02
CHD3-214ENST00000572579 BCL6BQ8N143 479 aaPredicted RBP15.2■□□□□ 0.02
CHD3-214ENST00000572579 ATG16L2Q8NAA4 619 aa15.2■□□□□ 0.02
CHD3-214ENST00000572579 GJC3Q8NFK1 279 aa15.2■□□□□ 0.02
CHD3-214ENST00000572579 OR10S1Q8NGN2 331 aa15.2■□□□□ 0.02
CHD3-214ENST00000572579 FANK1Q8TC84 345 aa15.2■□□□□ 0.02
CHD3-214ENST00000572579 SLC30A2Q9BRI3 323 aa15.2■□□□□ 0.02
CHD3-214ENST00000572579 C1QTNF5Q9BXJ0 243 aa15.2■□□□□ 0.02
CHD3-214ENST00000572579 NDEL1Q9GZM8 345 aa15.2■□□□□ 0.02
CHD3-214ENST00000572579 TMEM165Q9HC07 324 aa15.2■□□□□ 0.02
CHD3-214ENST00000572579 RPRD1BQ9NQG5 326 aaKnown RBP15.2■□□□□ 0.02
CHD3-214ENST00000572579 ATPIF1Q9UII2 106 aa15.2■□□□□ 0.02
CHD3-214ENST00000572579 SOX21Q9Y651 276 aaPredicted RBP15.2■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms