RNA–Protein interactions for RNA: ENST00000571613.5

RPAIN-210, Transcript of RPA interacting protein, humanhuman

TSL 2

Gene RPAIN, Length 1,688 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAIN-210ENST00000571613 SPRR3Q9UBC9 169 aa17.12■□□□□ 0.33
RPAIN-210ENST00000571613 RABL2AQ9UBK7 228 aaPredicted RBP17.12■□□□□ 0.33
RPAIN-210ENST00000571613 RABL2BQ9UNT1 228 aa17.12■□□□□ 0.33
RPAIN-210ENST00000571613 CAMK2AQ9UQM7 478 aa17.12■□□□□ 0.33
RPAIN-210ENST00000571613 LOC107986453A0A1B0GWG9 222 aa17.11■□□□□ 0.33
RPAIN-210ENST00000571613 MEGF11A6BM72 1044 aa17.11■□□□□ 0.33
RPAIN-210ENST00000571613 ANXA2P2A6NMY6 339 aa17.11■□□□□ 0.33
RPAIN-210ENST00000571613 FAM25AB3EWG3 89 aa17.11■□□□□ 0.33
RPAIN-210ENST00000571613 FAM25CB3EWG5 89 aa17.11■□□□□ 0.33
RPAIN-210ENST00000571613 FAM25GB3EWG6 89 aa17.11■□□□□ 0.33
RPAIN-210ENST00000571613 ANXA2P07355 339 aaKnown RBP17.11■□□□□ 0.33
RPAIN-210ENST00000571613 FSTP19883 344 aa17.11■□□□□ 0.33
RPAIN-210ENST00000571613 SCAND1P57086 179 aa17.11■□□□□ 0.33
RPAIN-210ENST00000571613 CEACAM16Q2WEN9 425 aa17.11■□□□□ 0.33
RPAIN-210ENST00000571613 SLC25A35Q3KQZ1 300 aa17.11■□□□□ 0.33
RPAIN-210ENST00000571613 CNIH2Q6PI25 160 aa17.11■□□□□ 0.33
RPAIN-210ENST00000571613 TUSC5Q8IXB3 177 aa17.11■□□□□ 0.33
RPAIN-210ENST00000571613 OR51A4Q8NGJ6 313 aa17.11■□□□□ 0.33
RPAIN-210ENST00000571613 OR10AC1Q8NH08 325 aa17.11■□□□□ 0.33
RPAIN-210ENST00000571613 ZNF671Q8TAW3 534 aa17.11■□□□□ 0.33
RPAIN-210ENST00000571613 SPTSSAQ969W0 71 aa17.11■□□□□ 0.33
RPAIN-210ENST00000571613 SARAFQ96BY9 339 aa17.11■□□□□ 0.33
RPAIN-210ENST00000571613 ALKBH3Q96Q83 286 aaPredicted RBP17.11■□□□□ 0.33
RPAIN-210ENST00000571613 CYSLTR2Q9NS75 346 aa17.11■□□□□ 0.33
RPAIN-210ENST00000571613 SPATA2Q9UM82 520 aa17.11■□□□□ 0.33
RPAIN-210ENST00000571613 SLC22A20A6NK97 555 aa17.1■□□□□ 0.33
RPAIN-210ENST00000571613 APOA1P02647 267 aa17.1■□□□□ 0.33
RPAIN-210ENST00000571613 ATF1P18846 271 aa17.1■□□□□ 0.33
RPAIN-210ENST00000571613 PMP22Q01453 160 aa17.1■□□□□ 0.33
RPAIN-210ENST00000571613 RIN1Q13671 783 aa17.1■□□□□ 0.33
RPAIN-210ENST00000571613 ABHD12BQ7Z5M8 362 aaPredicted RBP17.1■□□□□ 0.33
RPAIN-210ENST00000571613 LRRTM1Q86UE6 522 aa17.1■□□□□ 0.33
RPAIN-210ENST00000571613 LYSMD2Q8IV50 215 aa17.1■□□□□ 0.33
RPAIN-210ENST00000571613 LRRC18Q8N456 261 aa17.1■□□□□ 0.33
RPAIN-210ENST00000571613 ZNF283Q8N7M2 679 aa17.1■□□□□ 0.33
RPAIN-210ENST00000571613 OR13C3Q8NGS6 347 aa17.1■□□□□ 0.33
RPAIN-210ENST00000571613 APH1AQ96BI3 265 aa17.1■□□□□ 0.33
RPAIN-210ENST00000571613 SOSTQ9BQB4 213 aa17.1■□□□□ 0.33
RPAIN-210ENST00000571613 SRRQ9GZT4 340 aa17.1■□□□□ 0.33
RPAIN-210ENST00000571613 SLC25A18Q9H1K4 315 aa17.1■□□□□ 0.33
RPAIN-210ENST00000571613 CALHM2Q9HA72 323 aa17.1■□□□□ 0.33
RPAIN-210ENST00000571613 BRD7Q9NPI1 651 aa17.1■□□□□ 0.33
RPAIN-210ENST00000571613 A0A087WV48 116 aa17.1■□□□□ 0.33
RPAIN-210ENST00000571613 A0A1B0GVI7 797 aa17.1■□□□□ 0.33
RPAIN-210ENST00000571613 ZNF587BE7ETH6 402 aa17.1■□□□□ 0.33
RPAIN-210ENST00000571613 TTRP02766 147 aa17.1■□□□□ 0.33
RPAIN-210ENST00000571613 CALCBP10092 127 aa17.1■□□□□ 0.33
RPAIN-210ENST00000571613 CFPP27918 469 aa17.1■□□□□ 0.33
RPAIN-210ENST00000571613 MAGEB1P43366 347 aa17.1■□□□□ 0.33
RPAIN-210ENST00000571613 RANBP1P43487 201 aa17.1■□□□□ 0.33
RPAIN-210ENST00000571613 CX3CR1P49238 355 aa17.1■□□□□ 0.33
RPAIN-210ENST00000571613 RAB35Q15286 201 aa17.1■□□□□ 0.33
RPAIN-210ENST00000571613 TSPO2Q5TGU0 170 aa17.1■□□□□ 0.33
RPAIN-210ENST00000571613 Q6ZS92 163 aa17.1■□□□□ 0.33
RPAIN-210ENST00000571613 SLC22A24Q8N4F4 322 aa17.1■□□□□ 0.33
RPAIN-210ENST00000571613 SAMD12Q8N8I0 201 aa17.1■□□□□ 0.33
RPAIN-210ENST00000571613 CCDC54Q8NEL0 328 aa17.1■□□□□ 0.33
RPAIN-210ENST00000571613 PPP1R14AQ96A00 147 aa17.1■□□□□ 0.33
RPAIN-210ENST00000571613 SP140LQ9H930 580 aa17.1■□□□□ 0.33
RPAIN-210ENST00000571613 PLEK2Q9NYT0 353 aa17.1■□□□□ 0.33
RPAIN-210ENST00000571613 UPB1Q9UBR1 384 aa17.1■□□□□ 0.33
RPAIN-210ENST00000571613 TIMM10BQ9Y5J6 103 aa17.1■□□□□ 0.33
RPAIN-210ENST00000571613 MKRN2OSH3BPM6 223 aa17.09■□□□□ 0.33
RPAIN-210ENST00000571613 SYT7O43581 403 aa17.09■□□□□ 0.33
RPAIN-210ENST00000571613 ACSM4P0C7M7 580 aa17.09■□□□□ 0.33
RPAIN-210ENST00000571613 SLC2A2P11168 524 aaPredicted RBP17.09■□□□□ 0.33
RPAIN-210ENST00000571613 PRKXP51817 358 aa17.09■□□□□ 0.33
RPAIN-210ENST00000571613 ZNF121P58317 390 aaPredicted RBP17.09■□□□□ 0.33
RPAIN-210ENST00000571613 IFITM3Q01628 133 aa17.09■□□□□ 0.33
RPAIN-210ENST00000571613 ZNF79Q15937 498 aa17.09■□□□□ 0.33
RPAIN-210ENST00000571613 TRIM16LQ309B1 348 aa17.09■□□□□ 0.33
RPAIN-210ENST00000571613 CCDC92Q53HC0 331 aaPredicted RBP17.09■□□□□ 0.33
RPAIN-210ENST00000571613 RPUSD3Q6P087 351 aaKnown RBP17.09■□□□□ 0.33
RPAIN-210ENST00000571613 BAIAP2L2Q6UXY1 529 aa17.09■□□□□ 0.33
RPAIN-210ENST00000571613 OR8H2Q8N162 312 aa17.09■□□□□ 0.33
RPAIN-210ENST00000571613 ZNF837Q96EG3 531 aaPredicted RBP17.09■□□□□ 0.33
RPAIN-210ENST00000571613 WASF3Q9UPY6 502 aa17.09■□□□□ 0.33
RPAIN-210ENST00000571613 ETV7Q9Y603 341 aa17.09■□□□□ 0.33
RPAIN-210ENST00000571613 SGCEO43556 437 aa17.08■□□□□ 0.32
RPAIN-210ENST00000571613 OTX1P32242 354 aaPredicted RBP17.08■□□□□ 0.32
RPAIN-210ENST00000571613 STEAP3Q658P3 488 aa17.08■□□□□ 0.32
RPAIN-210ENST00000571613 Q6ZNX1 250 aa17.08■□□□□ 0.32
RPAIN-210ENST00000571613 ZNF627Q7L945 461 aa17.08■□□□□ 0.32
RPAIN-210ENST00000571613 SLC16A14Q7RTX9 510 aa17.08■□□□□ 0.32
RPAIN-210ENST00000571613 P4HA3Q7Z4N8 544 aa17.08■□□□□ 0.32
RPAIN-210ENST00000571613 ZNF100Q8IYN0 542 aa17.08■□□□□ 0.32
RPAIN-210ENST00000571613 SETD6Q8TBK2 473 aa17.08■□□□□ 0.32
RPAIN-210ENST00000571613 HTRA1Q92743 480 aa17.08■□□□□ 0.32
RPAIN-210ENST00000571613 FBXO17Q96EF6 278 aa17.08■□□□□ 0.32
RPAIN-210ENST00000571613 PLSCR2Q9NRY7 297 aa17.08■□□□□ 0.32
RPAIN-210ENST00000571613 ZNF275Q9NSD4 429 aaPredicted RBP17.08■□□□□ 0.32
RPAIN-210ENST00000571613 EXTL2Q9UBQ6 330 aa17.08■□□□□ 0.32
RPAIN-210ENST00000571613 DKK4Q9UBT3 224 aa17.08■□□□□ 0.32
RPAIN-210ENST00000571613 SLC5A6Q9Y289 635 aa17.08■□□□□ 0.32
RPAIN-210ENST00000571613 P2RY10O00398 339 aa17.07■□□□□ 0.32
RPAIN-210ENST00000571613 ELK1P19419 428 aa17.07■□□□□ 0.32
RPAIN-210ENST00000571613 IL18Q14116 193 aa17.07■□□□□ 0.32
RPAIN-210ENST00000571613 SF3B4Q15427 424 aaKnown RBP eCLIP17.07■□□□□ 0.325e-17■■■■■ 28.1
RPAIN-210ENST00000571613 C3AR1Q16581 482 aa17.07■□□□□ 0.32
RPAIN-210ENST00000571613 PYDC2Q56P42 97 aa17.07■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms