RNA–Protein interactions for RNA: ENST00000570484.1

CTDNEP1-204, Transcript of CTD nuclear envelope phosphatase 1, humanhuman

TSL 2

Gene CTDNEP1, Length 393 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDNEP1-204ENST00000570484 SYS1Q8N2H4 156 aa5.75□□□□□ -1.49
CTDNEP1-204ENST00000570484 RFLNBQ8N5W9 214 aa5.75□□□□□ -1.49
CTDNEP1-204ENST00000570484 ZNF283Q8N7M2 679 aa5.75□□□□□ -1.49
CTDNEP1-204ENST00000570484 LILRB4Q8NHJ6 448 aa5.75□□□□□ -1.49
CTDNEP1-204ENST00000570484 AKR7LQ8NHP1 331 aa5.75□□□□□ -1.49
CTDNEP1-204ENST00000570484 SMAP2Q8WU79 429 aaPredicted RBP5.75□□□□□ -1.49
CTDNEP1-204ENST00000570484 RNF133Q8WVZ7 376 aa5.75□□□□□ -1.49
CTDNEP1-204ENST00000570484 HSD17B8Q92506 261 aa5.75□□□□□ -1.49
CTDNEP1-204ENST00000570484 RORBQ92753 470 aa5.75□□□□□ -1.49
CTDNEP1-204ENST00000570484 BCL2L2Q92843 193 aaPredicted RBP5.75□□□□□ -1.49
CTDNEP1-204ENST00000570484 FBXO17Q96EF6 278 aa5.75□□□□□ -1.49
CTDNEP1-204ENST00000570484 OR8B4Q96RC9 309 aa5.75□□□□□ -1.49
CTDNEP1-204ENST00000570484 ABHD6Q9BV23 337 aa5.75□□□□□ -1.49
CTDNEP1-204ENST00000570484 CDCA4Q9BXL8 241 aa5.75□□□□□ -1.49
CTDNEP1-204ENST00000570484 OR10A4Q9H209 315 aa5.75□□□□□ -1.49
CTDNEP1-204ENST00000570484 NIPAL2Q9H841 368 aa5.75□□□□□ -1.49
CTDNEP1-204ENST00000570484 MOB1AQ9H8S9 216 aa5.75□□□□□ -1.49
CTDNEP1-204ENST00000570484 SP140LQ9H930 580 aa5.75□□□□□ -1.49
CTDNEP1-204ENST00000570484 CDH20Q9HBT6 801 aa5.75□□□□□ -1.49
CTDNEP1-204ENST00000570484 NGBQ9NPG2 151 aa5.75□□□□□ -1.49
CTDNEP1-204ENST00000570484 ACOXLQ9NUZ1 547 aa5.75□□□□□ -1.49
CTDNEP1-204ENST00000570484 FKBP14Q9NWM8 211 aa5.75□□□□□ -1.49
CTDNEP1-204ENST00000570484 PAK1IP1Q9NWT1 392 aaPredicted RBP5.75□□□□□ -1.49
CTDNEP1-204ENST00000570484 JKAMPQ9P055 326 aa5.75□□□□□ -1.49
CTDNEP1-204ENST00000570484 RALYQ9UKM9 306 aaKnown RBP5.75□□□□□ -1.49
CTDNEP1-204ENST00000570484 COPS3Q9UNS2 423 aa5.75□□□□□ -1.49
CTDNEP1-204ENST00000570484 KLHDC2Q9Y2U9 406 aa5.75□□□□□ -1.49
CTDNEP1-204ENST00000570484 CAB39Q9Y376 341 aaPredicted RBP5.75□□□□□ -1.49
CTDNEP1-204ENST00000570484 DSPP15924 2871 aaKnown RBP5.75□□□□□ -1.49
CTDNEP1-204ENST00000570484 ATMQ13315 3056 aa5.74□□□□□ -1.49
CTDNEP1-204ENST00000570484 TLN1Q9Y490 2541 aaKnown RBP5.74□□□□□ -1.49
CTDNEP1-204ENST00000570484 TUBAL3A6NHL2 446 aa5.74□□□□□ -1.49
CTDNEP1-204ENST00000570484 LOC110117498-PIK3R3F6TDL0 507 aa5.74□□□□□ -1.49
CTDNEP1-204ENST00000570484 PYCARD-AS1I3L0S3 204 aa5.74□□□□□ -1.49
CTDNEP1-204ENST00000570484 J3QKU1 62 aa5.74□□□□□ -1.49
CTDNEP1-204ENST00000570484 M0R135 149 aa5.74□□□□□ -1.49
CTDNEP1-204ENST00000570484 M0R1B8 84 aa5.74□□□□□ -1.49
CTDNEP1-204ENST00000570484 NOL3O60936 208 aaKnown RBP5.74□□□□□ -1.49
CTDNEP1-204ENST00000570484 SULT1C4O75897 302 aa5.74□□□□□ -1.49
CTDNEP1-204ENST00000570484 RPP14O95059 124 aaKnown RBP5.74□□□□□ -1.49
CTDNEP1-204ENST00000570484 ABHD16AO95870 558 aa5.74□□□□□ -1.49
CTDNEP1-204ENST00000570484 CLPTM1O96005 669 aa5.74□□□□□ -1.49
CTDNEP1-204ENST00000570484 SCG5P05408 212 aa5.74□□□□□ -1.49
CTDNEP1-204ENST00000570484 ANXA2P07355 339 aaKnown RBP5.74□□□□□ -1.49
CTDNEP1-204ENST00000570484 HTR1AP08908 422 aa5.74□□□□□ -1.49
CTDNEP1-204ENST00000570484 PATE4P0C8F1 98 aa5.74□□□□□ -1.49
CTDNEP1-204ENST00000570484 PSKH1P11801 424 aa5.74□□□□□ -1.49
CTDNEP1-204ENST00000570484 STOMP27105 288 aa5.74□□□□□ -1.49
CTDNEP1-204ENST00000570484 CCKARP32238 428 aa5.74□□□□□ -1.49
CTDNEP1-204ENST00000570484 CX3CR1P49238 355 aa5.74□□□□□ -1.49
CTDNEP1-204ENST00000570484 ETV1P50549 477 aa5.74□□□□□ -1.49
CTDNEP1-204ENST00000570484 ZNF83P51522 516 aa5.74□□□□□ -1.49
CTDNEP1-204ENST00000570484 HCCSP53701 268 aa5.74□□□□□ -1.49
CTDNEP1-204ENST00000570484 TPTEP56180 551 aa5.74□□□□□ -1.49
CTDNEP1-204ENST00000570484 PSG4Q00888 419 aa5.74□□□□□ -1.49
CTDNEP1-204ENST00000570484 ROM1Q03395 351 aa5.74□□□□□ -1.49
CTDNEP1-204ENST00000570484 ZNF85Q03923 595 aa5.74□□□□□ -1.49
CTDNEP1-204ENST00000570484 RAB39AQ14964 217 aa5.74□□□□□ -1.49
CTDNEP1-204ENST00000570484 TAB1Q15750 504 aa5.74□□□□□ -1.49
CTDNEP1-204ENST00000570484 GFOD2Q3B7J2 385 aa5.74□□□□□ -1.49
CTDNEP1-204ENST00000570484 CDONQ4KMG0 1287 aa5.74□□□□□ -1.49
CTDNEP1-204ENST00000570484 BCL2L15Q5TBC7 163 aa5.74□□□□□ -1.49
CTDNEP1-204ENST00000570484 OR2G6Q5TZ20 316 aa5.74□□□□□ -1.49
CTDNEP1-204ENST00000570484 ZNF774Q6NX45 483 aa5.74□□□□□ -1.49
CTDNEP1-204ENST00000570484 DEGS2Q6QHC5 323 aa5.74□□□□□ -1.49
CTDNEP1-204ENST00000570484 UNQ6126/PRO20091Q6UXV3 157 aa5.74□□□□□ -1.49
CTDNEP1-204ENST00000570484 KCTD8Q6ZWB6 473 aa5.74□□□□□ -1.49
CTDNEP1-204ENST00000570484 RHOUQ7L0Q8 258 aa5.74□□□□□ -1.49
CTDNEP1-204ENST00000570484 SSX6Q7RTT6 188 aa5.74□□□□□ -1.49
CTDNEP1-204ENST00000570484 KLBQ86Z14 1044 aa5.74□□□□□ -1.49
CTDNEP1-204ENST00000570484 SPARTQ8N0X7 666 aa5.74□□□□□ -1.49
CTDNEP1-204ENST00000570484 SLC30A7Q8NEW0 376 aa5.74□□□□□ -1.49
CTDNEP1-204ENST00000570484 OR1J2Q8NGS2 313 aa5.74□□□□□ -1.49
CTDNEP1-204ENST00000570484 OR1F12Q8NHA8 337 aa5.74□□□□□ -1.49
CTDNEP1-204ENST00000570484 ST7LQ8TDW4 575 aa5.74□□□□□ -1.49
CTDNEP1-204ENST00000570484 SPRYD4Q8WW59 207 aaPredicted RBP5.74□□□□□ -1.49
CTDNEP1-204ENST00000570484 ITLN2Q8WWU7 325 aaPredicted RBP5.74□□□□□ -1.49
CTDNEP1-204ENST00000570484 SGCDQ92629 289 aa5.74□□□□□ -1.49
CTDNEP1-204ENST00000570484 UFD1Q92890 307 aa5.74□□□□□ -1.49
CTDNEP1-204ENST00000570484 ZNF799Q96GE5 643 aa5.74□□□□□ -1.49
CTDNEP1-204ENST00000570484 ZC3HAV1LQ96H79 300 aaKnown RBP5.74□□□□□ -1.49
CTDNEP1-204ENST00000570484 MAP6Q96JE9 813 aa5.74□□□□□ -1.49
CTDNEP1-204ENST00000570484 DOK1Q99704 481 aa5.74□□□□□ -1.49
CTDNEP1-204ENST00000570484 COQ7Q99807 217 aa5.74□□□□□ -1.49
CTDNEP1-204ENST00000570484 COMMD4Q9H0A8 199 aa5.74□□□□□ -1.49
CTDNEP1-204ENST00000570484 WNT5BQ9H1J7 359 aa5.74□□□□□ -1.49
CTDNEP1-204ENST00000570484 ACOT13Q9NPJ3 140 aa5.74□□□□□ -1.49
CTDNEP1-204ENST00000570484 DDX28Q9NUL7 540 aaKnown RBP5.74□□□□□ -1.49
CTDNEP1-204ENST00000570484 EIF3KQ9UBQ5 218 aaKnown RBP5.74□□□□□ -1.49
CTDNEP1-204ENST00000570484 LRP12Q9Y561 859 aa5.74□□□□□ -1.49
CTDNEP1-204ENST00000570484 PIEZO2Q9H5I5 2752 aa5.74□□□□□ -1.49
CTDNEP1-204ENST00000570484 BOD1L1Q8NFC6 3051 aa5.74□□□□□ -1.49
CTDNEP1-204ENST00000570484 SPTA1P02549 2419 aa5.74□□□□□ -1.49
CTDNEP1-204ENST00000570484 TPRP12270 2363 aaKnown RBP5.73□□□□□ -1.49
CTDNEP1-204ENST00000570484 KIAA1549Q9HCM3 1950 aa5.73□□□□□ -1.49
CTDNEP1-204ENST00000570484 PNMA8CA0A1B0GUJ8 204 aa5.73□□□□□ -1.49
CTDNEP1-204ENST00000570484 TMEM269A0A1B0GVZ9 245 aa5.73□□□□□ -1.49
CTDNEP1-204ENST00000570484 C5orf49A4QMS7 147 aa5.73□□□□□ -1.49
CTDNEP1-204ENST00000570484 F5H5K5 113 aa5.73□□□□□ -1.49
CTDNEP1-204ENST00000570484 J3QRE1 110 aa5.73□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms