RNA–Protein interactions for RNA: ENST00000569422.1

LINC00558-201, long intergenic non-protein coding RNA 558, humanhuman

TSL 1 (best) BASIC

Gene LINC00558, Length 3,163 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00558-201ENST00000569422 ASPHD2Q6ICH7 369 aa7.83□□□□□ -1.16
LINC00558-201ENST00000569422 RNF128Q8TEB7 428 aa7.83□□□□□ -1.16
LINC00558-201ENST00000569422 ASB5Q8WWX0 329 aa7.83□□□□□ -1.16
LINC00558-201ENST00000569422 TMEM234Q8WY98 164 aa7.83□□□□□ -1.16
LINC00558-201ENST00000569422 C7orf50Q9BRJ6 194 aaKnown RBP7.83□□□□□ -1.16
LINC00558-201ENST00000569422 EDEM2Q9BV94 578 aa7.83□□□□□ -1.16
LINC00558-201ENST00000569422 ACTR6Q9GZN1 396 aa7.83□□□□□ -1.16
LINC00558-201ENST00000569422 EML5Q05BV3 1969 aa7.83□□□□□ -1.16
LINC00558-201ENST00000569422 SDK2Q58EX2 2172 aa7.83□□□□□ -1.16
LINC00558-201ENST00000569422 MEIKINA0A087WXM9 373 aa7.83□□□□□ -1.16
LINC00558-201ENST00000569422 A0A1B0GVI7 797 aa7.83□□□□□ -1.16
LINC00558-201ENST00000569422 A0A1W2PQD3 144 aa7.83□□□□□ -1.16
LINC00558-201ENST00000569422 A0A1W2PQM1 296 aa7.83□□□□□ -1.16
LINC00558-201ENST00000569422 NPIPB7O75200 414 aa7.83□□□□□ -1.16
LINC00558-201ENST00000569422 SCAF4O95104 1147 aaKnown RBP7.83□□□□□ -1.16
LINC00558-201ENST00000569422 H2BFMP0C1H6 154 aa7.83□□□□□ -1.16
LINC00558-201ENST00000569422 SULT1A3P0DMM9 295 aa7.83□□□□□ -1.16
LINC00558-201ENST00000569422 SULT1A4P0DMN0 295 aa7.83□□□□□ -1.16
LINC00558-201ENST00000569422 ANGPT1Q15389 498 aa7.83□□□□□ -1.16
LINC00558-201ENST00000569422 CCDC157Q569K6 752 aa7.83□□□□□ -1.16
LINC00558-201ENST00000569422 LIX1LQ8IVB5 337 aa7.83□□□□□ -1.16
LINC00558-201ENST00000569422 SPEM1Q8N4L4 309 aa7.83□□□□□ -1.16
LINC00558-201ENST00000569422 ACBD4Q8NC06 268 aa7.83□□□□□ -1.16
LINC00558-201ENST00000569422 OR10H5Q8NGA6 315 aa7.83□□□□□ -1.16
LINC00558-201ENST00000569422 OR52N5Q8NH56 324 aa7.83□□□□□ -1.16
LINC00558-201ENST00000569422 RPS4Y2Q8TD47 263 aa7.83□□□□□ -1.16
LINC00558-201ENST00000569422 CLEC4MQ9H2X3 399 aaPredicted RBP7.83□□□□□ -1.16
LINC00558-201ENST00000569422 TAS2R3Q9NYW6 316 aa7.83□□□□□ -1.16
LINC00558-201ENST00000569422 MRPS18BQ9Y676 258 aaKnown RBP7.83□□□□□ -1.16
LINC00558-201ENST00000569422 TRBV5-7A0A0A0MS05 114 aa7.83□□□□□ -1.16
LINC00558-201ENST00000569422 TMEM272A0A1B0GTI8 110 aa7.83□□□□□ -1.16
LINC00558-201ENST00000569422 TEX51A0A1B0GUA7 166 aa7.83□□□□□ -1.16
LINC00558-201ENST00000569422 LOC107986453A0A1B0GWG9 222 aa7.83□□□□□ -1.16
LINC00558-201ENST00000569422 A0A1W2PPH5 198 aa7.83□□□□□ -1.16
LINC00558-201ENST00000569422 LOC390937A0A1W2PQ73 354 aa7.83□□□□□ -1.16
LINC00558-201ENST00000569422 VSTM2BA6NLU5 285 aa7.83□□□□□ -1.16
LINC00558-201ENST00000569422 PHYHO14832 338 aa7.83□□□□□ -1.16
LINC00558-201ENST00000569422 TO15178 435 aa7.83□□□□□ -1.16
LINC00558-201ENST00000569422 XRCC3O43542 346 aa7.83□□□□□ -1.16
LINC00558-201ENST00000569422 SIGLEC6O43699 453 aa7.83□□□□□ -1.16
LINC00558-201ENST00000569422 SNAPINO95295 136 aa7.83□□□□□ -1.16
LINC00558-201ENST00000569422 CELA2AP08217 269 aa7.83□□□□□ -1.16
LINC00558-201ENST00000569422 KLK2P20151 261 aa7.83□□□□□ -1.16
LINC00558-201ENST00000569422 CRABP1P29762 137 aa7.83□□□□□ -1.16
LINC00558-201ENST00000569422 PRSS3P35030 304 aa7.83□□□□□ -1.16
LINC00558-201ENST00000569422 AP2S1P53680 142 aaPredicted RBP7.83□□□□□ -1.16
LINC00558-201ENST00000569422 PER3P56645 1201 aa7.83□□□□□ -1.16
LINC00558-201ENST00000569422 HSF1Q00613 529 aa7.83□□□□□ -1.16
LINC00558-201ENST00000569422 SHBQ15464 509 aa7.83□□□□□ -1.16
LINC00558-201ENST00000569422 SCGB2B2Q4G0G5 96 aa7.83□□□□□ -1.16
LINC00558-201ENST00000569422 RHBDD2Q6NTF9 364 aa7.83□□□□□ -1.16
LINC00558-201ENST00000569422 TMEM71Q6P5X7 295 aa7.83□□□□□ -1.16
LINC00558-201ENST00000569422 BRICD5Q6PL45 260 aa7.83□□□□□ -1.16
LINC00558-201ENST00000569422 H1FNTQ75WM6 255 aaPredicted RBP7.83□□□□□ -1.16
LINC00558-201ENST00000569422 EID2Q8N6I1 236 aa7.83□□□□□ -1.16
LINC00558-201ENST00000569422 ZNF441Q8N8Z8 693 aa7.83□□□□□ -1.16
LINC00558-201ENST00000569422 SREK1IP1Q8N9Q2 155 aaPredicted RBP7.83□□□□□ -1.16
LINC00558-201ENST00000569422 CHST4Q8NCG5 386 aa7.83□□□□□ -1.16
LINC00558-201ENST00000569422 MCHR2Q969V1 340 aa7.83□□□□□ -1.16
LINC00558-201ENST00000569422 FGGYQ96C11 551 aa7.83□□□□□ -1.16
LINC00558-201ENST00000569422 JSRP1Q96MG2 331 aaPredicted RBP7.83□□□□□ -1.16
LINC00558-201ENST00000569422 OR5B2Q96R09 309 aa7.83□□□□□ -1.16
LINC00558-201ENST00000569422 CHST6Q9GZX3 395 aa7.83□□□□□ -1.16
LINC00558-201ENST00000569422 RARRES3Q9UL19 164 aa7.83□□□□□ -1.16
LINC00558-201ENST00000569422 ATP6V1G2-DDX39BF2Z307 99 aa7.82□□□□□ -1.16
LINC00558-201ENST00000569422 CREBL2O60519 120 aaPredicted RBP7.82□□□□□ -1.16
LINC00558-201ENST00000569422 ZNF432O94892 652 aa7.82□□□□□ -1.16
LINC00558-201ENST00000569422 RAF1P04049 648 aa7.82□□□□□ -1.16
LINC00558-201ENST00000569422 HTR2CP28335 458 aa7.82□□□□□ -1.16
LINC00558-201ENST00000569422 ZNF41P51814 821 aaPredicted RBP7.82□□□□□ -1.16
LINC00558-201ENST00000569422 DCDP81605 110 aaKnown RBP7.82□□□□□ -1.16
LINC00558-201ENST00000569422 NKPD1Q17RQ9 610 aa7.82□□□□□ -1.16
LINC00558-201ENST00000569422 TEX261Q6UWH6 196 aa7.82□□□□□ -1.16
LINC00558-201ENST00000569422 PLPP5Q8NEB5 264 aa7.82□□□□□ -1.16
LINC00558-201ENST00000569422 ASB17Q8WXJ9 295 aa7.82□□□□□ -1.16
LINC00558-201ENST00000569422 HLA-CQ95604 372 aa7.82□□□□□ -1.16
LINC00558-201ENST00000569422 CMBLQ96DG6 245 aa7.82□□□□□ -1.16
LINC00558-201ENST00000569422 SHDQ96IW2 340 aa7.82□□□□□ -1.16
LINC00558-201ENST00000569422 MICU1Q9BPX6 476 aa7.82□□□□□ -1.16
LINC00558-201ENST00000569422 ZNF768Q9H5H4 540 aaKnown RBP7.82□□□□□ -1.16
LINC00558-201ENST00000569422 OCIAD1Q9NX40 245 aa7.82□□□□□ -1.16
LINC00558-201ENST00000569422 FBXL2Q9UKC9 423 aa7.82□□□□□ -1.16
LINC00558-201ENST00000569422 OR52A1Q9UKL2 312 aa7.82□□□□□ -1.16
LINC00558-201ENST00000569422 U3KQ87 197 aa7.82□□□□□ -1.16
LINC00558-201ENST00000569422 COL4A2P08572 1712 aa7.82□□□□□ -1.16
LINC00558-201ENST00000569422 PRSS44E7EML9 344 aa7.82□□□□□ -1.16
LINC00558-201ENST00000569422 TEX46H3BTG2 121 aa7.82□□□□□ -1.16
LINC00558-201ENST00000569422 EFNA2O43921 213 aa7.82□□□□□ -1.16
LINC00558-201ENST00000569422 CFDP00746 253 aaPredicted RBP7.82□□□□□ -1.16
LINC00558-201ENST00000569422 IGF2P01344 180 aa7.82□□□□□ -1.16
LINC00558-201ENST00000569422 GRK1Q15835 563 aa7.82□□□□□ -1.16
LINC00558-201ENST00000569422 C2orf68Q2NKX9 166 aa7.82□□□□□ -1.16
LINC00558-201ENST00000569422 MOGAT2Q3SYC2 334 aa7.82□□□□□ -1.16
LINC00558-201ENST00000569422 ZBTB37Q5TC79 503 aa7.82□□□□□ -1.16
LINC00558-201ENST00000569422 GLT8D1Q68CQ7 371 aa7.82□□□□□ -1.16
LINC00558-201ENST00000569422 ZNF767PQ75MW2 155 aa7.82□□□□□ -1.16
LINC00558-201ENST00000569422 Q7L0L9 218 aa7.82□□□□□ -1.16
LINC00558-201ENST00000569422 CD163Q86VB7 1156 aa7.82□□□□□ -1.16
LINC00558-201ENST00000569422 FJX1Q86VR8 437 aa7.82□□□□□ -1.16
LINC00558-201ENST00000569422 TNFAIP8L1Q8WVP5 186 aa7.82□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms