RNA–Protein interactions for RNA: ENST00000568883.5

PKM-222, Transcript of pyruvate kinase M1/2, human

TSL 5 BASIC

Gene PKM, Length 1,863 nt, Biotype protein coding, Subcellular localisation Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PKM-222	ENST00000568883	KLHL13	Q9P2N7	655 aa		11.32	□□□□□ -0.6
PKM-222	ENST00000568883	GDF2	Q9UK05	429 aa	Predicted RBP	11.32	□□□□□ -0.6
PKM-222	ENST00000568883	VDAC3	Q9Y277	283 aa		11.32	□□□□□ -0.6
PKM-222	ENST00000568883	PLEKHA6	Q9Y2H5	1048 aa		11.32	□□□□□ -0.6
PKM-222	ENST00000568883	TDRD6	O60522	2096 aa	Known RBP	11.31	□□□□□ -0.6
PKM-222	ENST00000568883	IGLV3-32	A0A0A0MS00	114 aa		11.31	□□□□□ -0.6
PKM-222	ENST00000568883	MSANTD3-TMEFF1	A0A0A6YYJ0	341 aa		11.31	□□□□□ -0.6
PKM-222	ENST00000568883	ZFAND5	O76080	213 aa		11.31	□□□□□ -0.6
PKM-222	ENST00000568883	IGHG1	P01857	330 aa		11.31	□□□□□ -0.6
PKM-222	ENST00000568883	GIMD1	P0DJR0	217 aa		11.31	□□□□□ -0.6
PKM-222	ENST00000568883	NR2C1	P13056	603 aa		11.31	□□□□□ -0.6
PKM-222	ENST00000568883	RAB3A	P20336	220 aa		11.31	□□□□□ -0.6
PKM-222	ENST00000568883	IL11	P20809	199 aa		11.31	□□□□□ -0.6
PKM-222	ENST00000568883	GNAL	P38405	381 aa		11.31	□□□□□ -0.6
PKM-222	ENST00000568883	EMP2	P54851	167 aa		11.31	□□□□□ -0.6
PKM-222	ENST00000568883	BID	P55957	195 aa		11.31	□□□□□ -0.6
PKM-222	ENST00000568883	CLRN1	P58418	232 aa		11.31	□□□□□ -0.6
PKM-222	ENST00000568883	DCD	P81605	110 aa	Known RBP	11.31	□□□□□ -0.6
PKM-222	ENST00000568883	SLC51B	Q86UW2	128 aa		11.31	□□□□□ -0.6
PKM-222	ENST00000568883	OR1M1	Q8NGA1	313 aa		11.31	□□□□□ -0.6
PKM-222	ENST00000568883	OR51A2	Q8NGJ7	313 aa		11.31	□□□□□ -0.6
PKM-222	ENST00000568883	OR2AJ1	Q8NGZ0	328 aa		11.31	□□□□□ -0.6
PKM-222	ENST00000568883	C11orf40	Q8WZ69	217 aa		11.31	□□□□□ -0.6
PKM-222	ENST00000568883	AQP3	Q92482	292 aa		11.31	□□□□□ -0.6
PKM-222	ENST00000568883	NUDT22	Q9BRQ3	303 aa		11.31	□□□□□ -0.6
PKM-222	ENST00000568883	EDEM2	Q9BV94	578 aa		11.31	□□□□□ -0.6
PKM-222	ENST00000568883	DUSP23	Q9BVJ7	150 aa		11.31	□□□□□ -0.6
PKM-222	ENST00000568883	TTYH1	Q9H313	450 aa	Predicted RBP	11.31	□□□□□ -0.6
PKM-222	ENST00000568883	CDCP1	Q9H5V8	836 aa		11.31	□□□□□ -0.6
PKM-222	ENST00000568883	SLC22A11	Q9NSA0	550 aa		11.31	□□□□□ -0.6
PKM-222	ENST00000568883	FBLN5	Q9UBX5	448 aa		11.31	□□□□□ -0.6
PKM-222	ENST00000568883	CYB5R1	Q9UHQ9	305 aa		11.31	□□□□□ -0.6
PKM-222	ENST00000568883	THADA	Q6YHU6	1953 aa		11.31	□□□□□ -0.6
PKM-222	ENST00000568883		A0A0D9SG52	128 aa		11.3	□□□□□ -0.6
PKM-222	ENST00000568883	MEN1	O00255	615 aa		11.3	□□□□□ -0.6
PKM-222	ENST00000568883	SIX6	O95475	246 aa		11.3	□□□□□ -0.6
PKM-222	ENST00000568883	ACSM4	P0C7M7	580 aa		11.3	□□□□□ -0.6
PKM-222	ENST00000568883	ZNF20	P17024	532 aa		11.3	□□□□□ -0.6
PKM-222	ENST00000568883	STARD6	P59095	220 aa		11.3	□□□□□ -0.6
PKM-222	ENST00000568883	SQSTM1	Q13501	440 aa		11.3	□□□□□ -0.6
PKM-222	ENST00000568883	C3orf33	Q6P1S2	294 aa		11.3	□□□□□ -0.6
PKM-222	ENST00000568883	ARSK	Q6UWY0	536 aa		11.3	□□□□□ -0.6
PKM-222	ENST00000568883	ZNF813	Q6ZN06	617 aa		11.3	□□□□□ -0.6
PKM-222	ENST00000568883	TMED4	Q7Z7H5	227 aa		11.3	□□□□□ -0.6
PKM-222	ENST00000568883	LYPD6	Q86Y78	171 aa		11.3	□□□□□ -0.6
PKM-222	ENST00000568883	ZDHHC22	Q8N966	263 aa		11.3	□□□□□ -0.6
PKM-222	ENST00000568883	DTWD2	Q8NBA8	298 aa		11.3	□□□□□ -0.6
PKM-222	ENST00000568883	OR6K3	Q8NGY3	331 aa		11.3	□□□□□ -0.6
PKM-222	ENST00000568883	SLC25A43	Q8WUT9	341 aa	Predicted RBP	11.3	□□□□□ -0.6
PKM-222	ENST00000568883	PMEPA1	Q969W9	287 aa		11.3	□□□□□ -0.6
PKM-222	ENST00000568883	FGGY	Q96C11	551 aa		11.3	□□□□□ -0.6
PKM-222	ENST00000568883	PBOV1	Q9GZY1	135 aa		11.3	□□□□□ -0.6
PKM-222	ENST00000568883	MFF	Q9GZY8	342 aa		11.3	□□□□□ -0.6
PKM-222	ENST00000568883	DUSP15	Q9H1R2	295 aa	Predicted RBP	11.3	□□□□□ -0.6
PKM-222	ENST00000568883	METTL7A	Q9H8H3	244 aa		11.3	□□□□□ -0.6
PKM-222	ENST00000568883	MED29	Q9NX70	200 aa		11.3	□□□□□ -0.6
PKM-222	ENST00000568883	COMMD9	Q9P000	198 aa		11.3	□□□□□ -0.6
PKM-222	ENST00000568883	RARRES3	Q9UL19	164 aa		11.3	□□□□□ -0.6
PKM-222	ENST00000568883	SLC5A6	Q9Y289	635 aa		11.3	□□□□□ -0.6
PKM-222	ENST00000568883	POLR1D	Q9Y2S0	133 aa		11.3	□□□□□ -0.6
PKM-222	ENST00000568883	CPED1	A4D0V7	1026 aa		11.29	□□□□□ -0.6
PKM-222	ENST00000568883	ZNF878	C9JN71	531 aa		11.29	□□□□□ -0.6
PKM-222	ENST00000568883		M0QYG6	137 aa		11.29	□□□□□ -0.6
PKM-222	ENST00000568883	EIF1AY	O14602	144 aa	Known RBP	11.29	□□□□□ -0.6
PKM-222	ENST00000568883	SCRG1	O75711	98 aa		11.29	□□□□□ -0.6
PKM-222	ENST00000568883	UBB	P0CG47	229 aa		11.29	□□□□□ -0.6
PKM-222	ENST00000568883	FOSL2	P15408	326 aa		11.29	□□□□□ -0.6
PKM-222	ENST00000568883	ZP3	P21754	424 aa		11.29	□□□□□ -0.6
PKM-222	ENST00000568883	CD34	P28906	385 aa		11.29	□□□□□ -0.6
PKM-222	ENST00000568883	EIF1AX	P47813	144 aa	Known RBP	11.29	□□□□□ -0.6
PKM-222	ENST00000568883	RPS27A	P62979	156 aa	Known RBP	11.29	□□□□□ -0.6
PKM-222	ENST00000568883	UBA52	P62987	128 aa	Known RBP	11.29	□□□□□ -0.6
PKM-222	ENST00000568883	FAHD2B	Q6P2I3	314 aa	Predicted RBP	11.29	□□□□□ -0.6
PKM-222	ENST00000568883	CPEB2	Q7Z5Q1	589 aa	Known RBP	11.29	□□□□□ -0.6
PKM-222	ENST00000568883	BEST3	Q8N1M1	668 aa		11.29	□□□□□ -0.6
PKM-222	ENST00000568883	GALNT16	Q8N428	558 aa		11.29	□□□□□ -0.6
PKM-222	ENST00000568883	NOXO1	Q8NFA2	376 aa		11.29	□□□□□ -0.6
PKM-222	ENST00000568883	STEAP2	Q8NFT2	490 aa		11.29	□□□□□ -0.6
PKM-222	ENST00000568883	OR4D6	Q8NGJ1	314 aa		11.29	□□□□□ -0.6
PKM-222	ENST00000568883	THAP3	Q8WTV1	239 aa	Predicted RBP	11.29	□□□□□ -0.6
PKM-222	ENST00000568883	FAHD2A	Q96GK7	314 aa		11.29	□□□□□ -0.6
PKM-222	ENST00000568883	TINAGL1	Q9GZM7	467 aa	Predicted RBP	11.29	□□□□□ -0.6
PKM-222	ENST00000568883	NARFL	Q9H6Q4	476 aa		11.29	□□□□□ -0.6
PKM-222	ENST00000568883	IFT46	Q9NQC8	304 aa		11.29	□□□□□ -0.6
PKM-222	ENST00000568883	GPN3	Q9UHW5	284 aa	Predicted RBP	11.29	□□□□□ -0.6
PKM-222	ENST00000568883	WIF1	Q9Y5W5	379 aa		11.29	□□□□□ -0.6
PKM-222	ENST00000568883	C2orf72	A6NCS6	295 aa		11.29	□□□□□ -0.6
PKM-222	ENST00000568883	TMEM235	A6NFC5	223 aa		11.29	□□□□□ -0.6
PKM-222	ENST00000568883	KRBOX1	C9JBD0	128 aa		11.29	□□□□□ -0.6
PKM-222	ENST00000568883		H3BML4	177 aa		11.29	□□□□□ -0.6
PKM-222	ENST00000568883	CD8A	P01732	235 aa		11.29	□□□□□ -0.6
PKM-222	ENST00000568883	TTR	P02766	147 aa		11.29	□□□□□ -0.6
PKM-222	ENST00000568883	CHRM2	P08172	466 aa		11.29	□□□□□ -0.6
PKM-222	ENST00000568883	ZNF735	P0CB33	412 aa		11.29	□□□□□ -0.6
PKM-222	ENST00000568883	ENPP1	P22413	925 aa		11.29	□□□□□ -0.6
PKM-222	ENST00000568883	SORD	Q00796	357 aa		11.29	□□□□□ -0.6
PKM-222	ENST00000568883	SRSF4	Q08170	494 aa	Known RBP	11.29	□□□□□ -0.6
PKM-222	ENST00000568883	MYBPH	Q13203	477 aa		11.29	□□□□□ -0.6
PKM-222	ENST00000568883	NR0B2	Q15466	257 aa		11.29	□□□□□ -0.6
PKM-222	ENST00000568883	TAF13	Q15543	124 aa		11.29	□□□□□ -0.6

Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms