RNA–Protein interactions for RNA: ENST00000568038.1

SMG1-214, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 2

Gene SMG1, Length 1,210 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-214ENST00000568038 UBAP1Q9NZ09 502 aa6.75□□□□□ -1.33
SMG1-214ENST00000568038 WARS2Q9UGM6 360 aaKnown RBP6.75□□□□□ -1.33
SMG1-214ENST00000568038 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP6.75□□□□□ -1.33
SMG1-214ENST00000568038 COMMD3-BMI1R4GMX3 469 aa6.75□□□□□ -1.33
SMG1-214ENST00000568038 RP1L1Q8IWN7 2480 aaPredicted RBP6.74□□□□□ -1.33
SMG1-214ENST00000568038 ZFYVE26Q68DK2 2539 aa6.74□□□□□ -1.33
SMG1-214ENST00000568038 FAM208BQ5VWN6 2430 aa6.74□□□□□ -1.33
SMG1-214ENST00000568038 FAM20BO75063 409 aa6.74□□□□□ -1.33
SMG1-214ENST00000568038 HLA-HP01893 362 aa6.74□□□□□ -1.33
SMG1-214ENST00000568038 SPARCP09486 303 aa6.74□□□□□ -1.33
SMG1-214ENST00000568038 DBTP11182 482 aaKnown RBP6.74□□□□□ -1.33
SMG1-214ENST00000568038 PSKH1P11801 424 aa6.74□□□□□ -1.33
SMG1-214ENST00000568038 CD79AP11912 226 aa6.74□□□□□ -1.33
SMG1-214ENST00000568038 UGT2B10P36537 528 aa6.74□□□□□ -1.33
SMG1-214ENST00000568038 MTNR1AP48039 350 aa6.74□□□□□ -1.33
SMG1-214ENST00000568038 ENTPD1P49961 510 aa6.74□□□□□ -1.33
SMG1-214ENST00000568038 BLVRAP53004 296 aa6.74□□□□□ -1.33
SMG1-214ENST00000568038 HCCSP53701 268 aa6.74□□□□□ -1.33
SMG1-214ENST00000568038 ZNF91Q05481 1191 aa6.74□□□□□ -1.33
SMG1-214ENST00000568038 PIGFQ07326 219 aa6.74□□□□□ -1.33
SMG1-214ENST00000568038 ENDOGQ14249 297 aaKnown RBP6.74□□□□□ -1.33
SMG1-214ENST00000568038 FBXL19-AS1Q494R0 122 aa6.74□□□□□ -1.33
SMG1-214ENST00000568038 FAM27BQ5VT28 67 aa6.74□□□□□ -1.33
SMG1-214ENST00000568038 OR7E24Q6IFN5 339 aa6.74□□□□□ -1.33
SMG1-214ENST00000568038 TMEM154Q6P9G4 183 aa6.74□□□□□ -1.33
SMG1-214ENST00000568038 CORO6Q6QEF8 472 aa6.74□□□□□ -1.33
SMG1-214ENST00000568038 SLC16A14Q7RTX9 510 aa6.74□□□□□ -1.33
SMG1-214ENST00000568038 DPY19L4Q7Z388 723 aa6.74□□□□□ -1.33
SMG1-214ENST00000568038 TIGD4Q8IY51 512 aa6.74□□□□□ -1.33
SMG1-214ENST00000568038 ZNF786Q8N393 782 aa6.74□□□□□ -1.33
SMG1-214ENST00000568038 WDR31Q8NA23 367 aa6.74□□□□□ -1.33
SMG1-214ENST00000568038 C1orf162Q8NEQ5 155 aaPredicted RBP6.74□□□□□ -1.33
SMG1-214ENST00000568038 STEAP2Q8NFT2 490 aa6.74□□□□□ -1.33
SMG1-214ENST00000568038 OR4F15Q8NGB8 312 aa6.74□□□□□ -1.33
SMG1-214ENST00000568038 OR2AJ1Q8NGZ0 328 aa6.74□□□□□ -1.33
SMG1-214ENST00000568038 FGFBP3Q8TAT2 258 aa6.74□□□□□ -1.33
SMG1-214ENST00000568038 S100PBPQ96BU1 408 aa6.74□□□□□ -1.33
SMG1-214ENST00000568038 FBXO17Q96EF6 278 aa6.74□□□□□ -1.33
SMG1-214ENST00000568038 ZC3HAV1LQ96H79 300 aaKnown RBP6.74□□□□□ -1.33
SMG1-214ENST00000568038 CNN2Q99439 309 aaKnown RBP6.74□□□□□ -1.33
SMG1-214ENST00000568038 TBX5Q99593 518 aa6.74□□□□□ -1.33
SMG1-214ENST00000568038 RHNO1Q9BSD3 238 aa6.74□□□□□ -1.33
SMG1-214ENST00000568038 C1QTNF6Q9BXI9 259 aa6.74□□□□□ -1.33
SMG1-214ENST00000568038 ACTR6Q9GZN1 396 aa6.74□□□□□ -1.33
SMG1-214ENST00000568038 ADGRL4Q9HBW9 690 aa6.74□□□□□ -1.33
SMG1-214ENST00000568038 CCNB1IP1Q9NPC3 277 aa6.74□□□□□ -1.33
SMG1-214ENST00000568038 SLC17A5Q9NRA2 495 aa6.74□□□□□ -1.33
SMG1-214ENST00000568038 RPL36Q9Y3U8 105 aaKnown RBP6.74□□□□□ -1.33
SMG1-214ENST00000568038 IGSF10Q6WRI0 2623 aa6.73□□□□□ -1.33
SMG1-214ENST00000568038 ITPR1Q14643 2758 aa6.73□□□□□ -1.33
SMG1-214ENST00000568038 WIPF3A6NGB9 483 aa6.73□□□□□ -1.33
SMG1-214ENST00000568038 OR5H1A6NKK0 313 aa6.73□□□□□ -1.33
SMG1-214ENST00000568038 C12orf71A8MTZ7 269 aa6.73□□□□□ -1.33
SMG1-214ENST00000568038 PTGES3LE9PB15 166 aa6.73□□□□□ -1.33
SMG1-214ENST00000568038 SLC1A7O00341 560 aa6.73□□□□□ -1.33
SMG1-214ENST00000568038 RER1O15258 196 aa6.73□□□□□ -1.33
SMG1-214ENST00000568038 TMCC2O75069 709 aa6.73□□□□□ -1.33
SMG1-214ENST00000568038 HRGP04196 525 aa6.73□□□□□ -1.33
SMG1-214ENST00000568038 CST2P09228 141 aa6.73□□□□□ -1.33
SMG1-214ENST00000568038 SBK2P0C263 348 aa6.73□□□□□ -1.33
SMG1-214ENST00000568038 ZNF32P17041 273 aa6.73□□□□□ -1.33
SMG1-214ENST00000568038 CCKARP32238 428 aa6.73□□□□□ -1.33
SMG1-214ENST00000568038 LSM6P62312 80 aaKnown RBP6.73□□□□□ -1.33
SMG1-214ENST00000568038 TFF3Q07654 80 aa6.73□□□□□ -1.33
SMG1-214ENST00000568038 TMED1Q13445 227 aa6.73□□□□□ -1.33
SMG1-214ENST00000568038 EIF2B1Q14232 305 aaKnown RBP6.73□□□□□ -1.33
SMG1-214ENST00000568038 GGTLC2Q14390 218 aa6.73□□□□□ -1.33
SMG1-214ENST00000568038 NRN1LQ496H8 165 aa6.73□□□□□ -1.33
SMG1-214ENST00000568038 TIMM23BQ5SRD1 257 aa6.73□□□□□ -1.33
SMG1-214ENST00000568038 ZNF627Q7L945 461 aa6.73□□□□□ -1.33
SMG1-214ENST00000568038 SLC16A9Q7RTY1 509 aa6.73□□□□□ -1.33
SMG1-214ENST00000568038 DCXRQ7Z4W1 244 aa6.73□□□□□ -1.33
SMG1-214ENST00000568038 MDP1Q86V88 176 aa6.73□□□□□ -1.33
SMG1-214ENST00000568038 CDC20BQ86Y33 519 aa6.73□□□□□ -1.33
SMG1-214ENST00000568038 SLC35F2Q8IXU6 374 aa6.73□□□□□ -1.33
SMG1-214ENST00000568038 C17orf78Q8N4C9 275 aa6.73□□□□□ -1.33
SMG1-214ENST00000568038 ZNF540Q8NDQ6 660 aa6.73□□□□□ -1.33
SMG1-214ENST00000568038 OR10H4Q8NGA5 316 aa6.73□□□□□ -1.33
SMG1-214ENST00000568038 OR52I1Q8NGK6 324 aa6.73□□□□□ -1.33
SMG1-214ENST00000568038 LINC01560Q8TB33 94 aa6.73□□□□□ -1.33
SMG1-214ENST00000568038 SSC4DQ8WTU2 575 aa6.73□□□□□ -1.33
SMG1-214ENST00000568038 THEM6Q8WUY1 208 aa6.73□□□□□ -1.33
SMG1-214ENST00000568038 GGHQ92820 318 aa6.73□□□□□ -1.33
SMG1-214ENST00000568038 MUCL1Q96DR8 90 aa6.73□□□□□ -1.33
SMG1-214ENST00000568038 LGALS12Q96DT0 336 aa6.73□□□□□ -1.33
SMG1-214ENST00000568038 TTTY10Q9BZA0 68 aa6.73□□□□□ -1.33
SMG1-214ENST00000568038 MARCH7Q9H992 704 aa6.73□□□□□ -1.33
SMG1-214ENST00000568038 NOX3Q9HBY0 568 aa6.73□□□□□ -1.33
SMG1-214ENST00000568038 SCN3BQ9NY72 215 aa6.73□□□□□ -1.33
SMG1-214ENST00000568038 HAO2Q9NYQ3 351 aa6.73□□□□□ -1.33
SMG1-214ENST00000568038 ZNF224Q9NZL3 707 aa6.73□□□□□ -1.33
SMG1-214ENST00000568038 KCNG2Q9UJ96 466 aa6.73□□□□□ -1.33
SMG1-214ENST00000568038 COPS3Q9UNS2 423 aa6.73□□□□□ -1.33
SMG1-214ENST00000568038 LHFPL6Q9Y693 200 aa6.73□□□□□ -1.33
SMG1-214ENST00000568038 HIVEP3Q5T1R4 2406 aa6.73□□□□□ -1.33
SMG1-214ENST00000568038 TRBV23-1A0A0A0MS06 115 aa6.72□□□□□ -1.33
SMG1-214ENST00000568038 ARPC4-TTLL3A0A0A6YYG9 625 aa6.72□□□□□ -1.33
SMG1-214ENST00000568038 EFCAB10A6NFE3 127 aa6.72□□□□□ -1.33
SMG1-214ENST00000568038 ZNF670-ZNF695F2Z2N8 137 aa6.72□□□□□ -1.33
SMG1-214ENST00000568038 PSMD9O00233 223 aa6.72□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms