RNA–Protein interactions for RNA: ENST00000567805.5

CLK3-219, Transcript of CDC like kinase 3, humanhuman

TSL 3

Gene CLK3, Length 327 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-219ENST00000567805 B2RBV5 119 aa4.06□□□□□ -1.76
CLK3-219ENST00000567805 FAM157AC9JC47 383 aa4.06□□□□□ -1.76
CLK3-219ENST00000567805 DCTN6O00399 190 aa4.06□□□□□ -1.76
CLK3-219ENST00000567805 WNT9BO14905 357 aa4.06□□□□□ -1.76
CLK3-219ENST00000567805 RER1O15258 196 aa4.06□□□□□ -1.76
CLK3-219ENST00000567805 IDH3BO43837 385 aa4.06□□□□□ -1.76
CLK3-219ENST00000567805 TIMM8AO60220 97 aaPredicted RBP4.06□□□□□ -1.76
CLK3-219ENST00000567805 UBOX5O94941 541 aa4.06□□□□□ -1.76
CLK3-219ENST00000567805 PPP1R3DO95685 299 aa4.06□□□□□ -1.76
CLK3-219ENST00000567805 FAM107AO95990 144 aa4.06□□□□□ -1.76
CLK3-219ENST00000567805 PNPP00491 289 aa4.06□□□□□ -1.76
CLK3-219ENST00000567805 CD55P08174 381 aa4.06□□□□□ -1.76
CLK3-219ENST00000567805 HIST1H1CP16403 213 aaKnown RBP4.06□□□□□ -1.76
CLK3-219ENST00000567805 TNFRSF1AP19438 455 aa4.06□□□□□ -1.76
CLK3-219ENST00000567805 KITLGP21583 273 aa4.06□□□□□ -1.76
CLK3-219ENST00000567805 CALB2P22676 271 aa4.06□□□□□ -1.76
CLK3-219ENST00000567805 TNFSF4P23510 183 aa4.06□□□□□ -1.76
CLK3-219ENST00000567805 NOS3P29474 1203 aa4.06□□□□□ -1.76
CLK3-219ENST00000567805 SRP14P37108 136 aaKnown RBP4.06□□□□□ -1.76
CLK3-219ENST00000567805 MAGEA2P43356 314 aa4.06□□□□□ -1.76
CLK3-219ENST00000567805 GSSP48637 474 aa4.06□□□□□ -1.76
CLK3-219ENST00000567805 CENPAP49450 140 aa4.06□□□□□ -1.76
CLK3-219ENST00000567805 HMGA2P52926 109 aa4.06□□□□□ -1.76
CLK3-219ENST00000567805 LMO4P61968 165 aa4.06□□□□□ -1.76
CLK3-219ENST00000567805 HIST1H3AP68431 136 aa4.06□□□□□ -1.76
CLK3-219ENST00000567805 MVKQ03426 396 aa4.06□□□□□ -1.76
CLK3-219ENST00000567805 COX10Q12887 443 aa4.06□□□□□ -1.76
CLK3-219ENST00000567805 SCGB2A2Q13296 93 aa4.06□□□□□ -1.76
CLK3-219ENST00000567805 CDK5R2Q13319 367 aa4.06□□□□□ -1.76
CLK3-219ENST00000567805 CCDC92Q53HC0 331 aaPredicted RBP4.06□□□□□ -1.76
CLK3-219ENST00000567805 AVPI1Q5T686 147 aa4.06□□□□□ -1.76
CLK3-219ENST00000567805 HIST2H3PS2Q5TEC6 136 aa4.06□□□□□ -1.76
CLK3-219ENST00000567805 LCN8Q6JVE9 175 aa4.06□□□□□ -1.76
CLK3-219ENST00000567805 ACSM5Q6NUN0 579 aa4.06□□□□□ -1.76
CLK3-219ENST00000567805 RPL13AP3Q6NVV1 102 aa4.06□□□□□ -1.76
CLK3-219ENST00000567805 PGBD2Q6P3X8 592 aa4.06□□□□□ -1.76
CLK3-219ENST00000567805 CYP2R1Q6VVX0 501 aa4.06□□□□□ -1.76
CLK3-219ENST00000567805 ZNF620Q6ZNG0 422 aa4.06□□□□□ -1.76
CLK3-219ENST00000567805 RINLQ6ZS11 566 aa4.06□□□□□ -1.76
CLK3-219ENST00000567805 HIST2H3AQ71DI3 136 aa4.06□□□□□ -1.76
CLK3-219ENST00000567805 PEG10Q86TG7 708 aaKnown RBP4.06□□□□□ -1.76
CLK3-219ENST00000567805 ZBTB46Q86UZ6 589 aa4.06□□□□□ -1.76
CLK3-219ENST00000567805 JAZF1Q86VZ6 243 aa4.06□□□□□ -1.76
CLK3-219ENST00000567805 PHC2Q8IXK0 858 aa4.06□□□□□ -1.76
CLK3-219ENST00000567805 OR6V1Q8N148 313 aa4.06□□□□□ -1.76
CLK3-219ENST00000567805 RFLNBQ8N5W9 214 aa4.06□□□□□ -1.76
CLK3-219ENST00000567805 TEX29Q8N6K0 151 aa4.06□□□□□ -1.76
CLK3-219ENST00000567805 FITM2Q8N6M3 262 aa4.06□□□□□ -1.76
CLK3-219ENST00000567805 OR52L1Q8NGH7 329 aa4.06□□□□□ -1.76
CLK3-219ENST00000567805 OR5L1Q8NGL2 311 aa4.06□□□□□ -1.76
CLK3-219ENST00000567805 OR1F12Q8NHA8 337 aa4.06□□□□□ -1.76
CLK3-219ENST00000567805 GNPDA2Q8TDQ7 276 aa4.06□□□□□ -1.76
CLK3-219ENST00000567805 SLC7A6Q92536 515 aa4.06□□□□□ -1.76
CLK3-219ENST00000567805 CCL17Q92583 94 aa4.06□□□□□ -1.76
CLK3-219ENST00000567805 RAB1CQ92928 201 aa4.06□□□□□ -1.76
CLK3-219ENST00000567805 PTP4A1Q93096 173 aa4.06□□□□□ -1.76
CLK3-219ENST00000567805 HAVCR1Q96D42 359 aa4.06□□□□□ -1.76
CLK3-219ENST00000567805 SAMD8Q96LT4 415 aa4.06□□□□□ -1.76
CLK3-219ENST00000567805 TSSK2Q96PF2 358 aa4.06□□□□□ -1.76
CLK3-219ENST00000567805 CCT8L2Q96SF2 557 aa4.06□□□□□ -1.76
CLK3-219ENST00000567805 NMNAT3Q96T66 252 aa4.06□□□□□ -1.76
CLK3-219ENST00000567805 COQ7Q99807 217 aa4.06□□□□□ -1.76
CLK3-219ENST00000567805 IFT27Q9BW83 186 aa4.06□□□□□ -1.76
CLK3-219ENST00000567805 TRIM15Q9C019 465 aa4.06□□□□□ -1.76
CLK3-219ENST00000567805 HDHD2Q9H0R4 259 aa4.06□□□□□ -1.76
CLK3-219ENST00000567805 POFUT1Q9H488 388 aa4.06□□□□□ -1.76
CLK3-219ENST00000567805 MAGIXQ9H6Y5 334 aa4.06□□□□□ -1.76
CLK3-219ENST00000567805 ZNF665Q9H7R5 613 aa4.06□□□□□ -1.76
CLK3-219ENST00000567805 MSL2Q9HCI7 577 aa4.06□□□□□ -1.76
CLK3-219ENST00000567805 HIF1ANQ9NWT6 349 aa4.06□□□□□ -1.76
CLK3-219ENST00000567805 TREM2Q9NZC2 230 aa4.06□□□□□ -1.76
CLK3-219ENST00000567805 ACTR3BQ9P1U1 418 aa4.06□□□□□ -1.76
CLK3-219ENST00000567805 IL19Q9UHD0 177 aa4.06□□□□□ -1.76
CLK3-219ENST00000567805 PURGQ9UJV8 347 aaKnown RBP4.06□□□□□ -1.76
CLK3-219ENST00000567805 B9D1Q9UPM9 204 aa4.06□□□□□ -1.76
CLK3-219ENST00000567805 STARD10Q9Y365 291 aa4.06□□□□□ -1.76
CLK3-219ENST00000567805 GRIP1Q9Y3R0 1128 aa4.06□□□□□ -1.76
CLK3-219ENST00000567805 WIPI2Q9Y4P8 454 aa4.06□□□□□ -1.76
CLK3-219ENST00000567805 LYVE1Q9Y5Y7 322 aa4.06□□□□□ -1.76
CLK3-219ENST00000567805 LHFPL6Q9Y693 200 aa4.06□□□□□ -1.76
CLK3-219ENST00000567805 CACNG2Q9Y698 323 aa4.06□□□□□ -1.76
CLK3-219ENST00000567805 A0A0G2JMP0 313 aa4.05□□□□□ -1.76
CLK3-219ENST00000567805 A0A0X1KG70 313 aa4.05□□□□□ -1.76
CLK3-219ENST00000567805 TCRBV5S2A0A599 114 aa4.05□□□□□ -1.76
CLK3-219ENST00000567805 ISPDA4D126 451 aa4.05□□□□□ -1.76
CLK3-219ENST00000567805 OR6C68A6NDL8 312 aa4.05□□□□□ -1.76
CLK3-219ENST00000567805 TNFRSF11BO00300 401 aa4.05□□□□□ -1.76
CLK3-219ENST00000567805 BHLHE40O14503 412 aa4.05□□□□□ -1.76
CLK3-219ENST00000567805 SURF4O15260 269 aa4.05□□□□□ -1.76
CLK3-219ENST00000567805 TCF21O43680 179 aa4.05□□□□□ -1.76
CLK3-219ENST00000567805 DEAF1O75398 565 aaPredicted RBP4.05□□□□□ -1.76
CLK3-219ENST00000567805 GPANK1O95872 356 aa4.05□□□□□ -1.76
CLK3-219ENST00000567805 IGHV2-5P01817 119 aa4.05□□□□□ -1.76
CLK3-219ENST00000567805 HLA-DQA2P01906 255 aa4.05□□□□□ -1.76
CLK3-219ENST00000567805 DBHP09172 617 aa4.05□□□□□ -1.76
CLK3-219ENST00000567805 RAC2P15153 192 aa4.05□□□□□ -1.76
CLK3-219ENST00000567805 ATP6V1B2P21281 511 aa4.05□□□□□ -1.76
CLK3-219ENST00000567805 GATA3P23771 443 aa4.05□□□□□ -1.76
CLK3-219ENST00000567805 TNFAIP6P98066 277 aaPredicted RBP4.05□□□□□ -1.76
CLK3-219ENST00000567805 KHDRBS1Q07666 443 aaKnown RBP eCLIP4.05□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms