RNA–Protein interactions for RNA: ENST00000567720.5

COMMD4-220, Transcript of COMM domain containing 4, humanhuman

TSL 4

Gene COMMD4, Length 544 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-220ENST00000567720 ZNF593O00488 134 aaPredicted RBP14.78□□□□□ -0.04
COMMD4-220ENST00000567720 PEX2P28328 305 aa14.78□□□□□ -0.04
COMMD4-220ENST00000567720 NAA10P41227 235 aaPredicted RBP14.78□□□□□ -0.04
COMMD4-220ENST00000567720 ATP5J2P56134 94 aa14.78□□□□□ -0.04
COMMD4-220ENST00000567720 RPS7P62081 194 aaKnown RBP14.78□□□□□ -0.04
COMMD4-220ENST00000567720 ELF3P78545 371 aaPredicted RBP14.78□□□□□ -0.04
COMMD4-220ENST00000567720 RSPO1Q2MKA7 263 aaPredicted RBP14.78□□□□□ -0.04
COMMD4-220ENST00000567720 ZIK1Q3SY52 487 aaPredicted RBP14.78□□□□□ -0.04
COMMD4-220ENST00000567720 ZBTB49Q6ZSB9 765 aa14.78□□□□□ -0.04
COMMD4-220ENST00000567720 DPY19L4Q7Z388 723 aa14.78□□□□□ -0.04
COMMD4-220ENST00000567720 C4orf45Q96LM5 186 aa14.78□□□□□ -0.04
COMMD4-220ENST00000567720 IL4I1Q96RQ9 567 aa14.78□□□□□ -0.04
COMMD4-220ENST00000567720 PITX2Q99697 317 aa14.78□□□□□ -0.04
COMMD4-220ENST00000567720 TANC2Q9HCD6 1990 aa14.78□□□□□ -0.04
COMMD4-220ENST00000567720 CR1P17927 2039 aa14.77□□□□□ -0.04
COMMD4-220ENST00000567720 IGLV3-9A0A075B6K5 115 aa14.77□□□□□ -0.05
COMMD4-220ENST00000567720 TLX2O43763 284 aaPredicted RBP14.77□□□□□ -0.05
COMMD4-220ENST00000567720 CLPTM1O96005 669 aa14.77□□□□□ -0.05
COMMD4-220ENST00000567720 ZNF250P15622 560 aa14.77□□□□□ -0.05
COMMD4-220ENST00000567720 RAD52P43351 418 aa14.77□□□□□ -0.05
COMMD4-220ENST00000567720 PPOXP50336 477 aa14.77□□□□□ -0.05
COMMD4-220ENST00000567720 PPP1CBP62140 327 aa14.77□□□□□ -0.05
COMMD4-220ENST00000567720 MAD2L1BPQ15013 274 aaPredicted RBP14.77□□□□□ -0.05
COMMD4-220ENST00000567720 TRIP10Q15642 601 aa14.77□□□□□ -0.05
COMMD4-220ENST00000567720 AADACL4Q5VUY2 407 aa14.77□□□□□ -0.05
COMMD4-220ENST00000567720 WFDC11Q8NEX6 87 aa14.77□□□□□ -0.05
COMMD4-220ENST00000567720 FAM81AQ8TBF8 368 aa14.77□□□□□ -0.05
COMMD4-220ENST00000567720 SLC25A40Q8TBP6 338 aa14.77□□□□□ -0.05
COMMD4-220ENST00000567720 IPCEF1Q8WWN9 437 aaPredicted RBP14.77□□□□□ -0.05
COMMD4-220ENST00000567720 HRASLS5Q96KN8 279 aa14.77□□□□□ -0.05
COMMD4-220ENST00000567720 SORCS2Q96PQ0 1159 aa14.77□□□□□ -0.05
COMMD4-220ENST00000567720 AMELYQ99218 206 aa14.77□□□□□ -0.05
COMMD4-220ENST00000567720 DOK1Q99704 481 aa14.77□□□□□ -0.05
COMMD4-220ENST00000567720 EIF3KQ9UBQ5 218 aaKnown RBP14.77□□□□□ -0.05
COMMD4-220ENST00000567720 GRIP1Q9Y3R0 1128 aa14.77□□□□□ -0.05
COMMD4-220ENST00000567720 ANOS1P23352 680 aa14.76□□□□□ -0.05
COMMD4-220ENST00000567720 MPV17P39210 176 aa14.76□□□□□ -0.05
COMMD4-220ENST00000567720 EIF2B1Q14232 305 aaKnown RBP14.76□□□□□ -0.05
COMMD4-220ENST00000567720 LCN1P1Q5VSP4 162 aa14.76□□□□□ -0.05
COMMD4-220ENST00000567720 NXNL2Q5VZ03 156 aa14.76□□□□□ -0.05
COMMD4-220ENST00000567720 LPCAT4Q643R3 524 aa14.76□□□□□ -0.05
COMMD4-220ENST00000567720 SPNS3Q6ZMD2 512 aa14.76□□□□□ -0.05
COMMD4-220ENST00000567720 SLAMF6Q96DU3 332 aa14.76□□□□□ -0.05
COMMD4-220ENST00000567720 TRMT61AQ96FX7 289 aaKnown RBP14.76□□□□□ -0.05
COMMD4-220ENST00000567720 MARS2Q96GW9 593 aaKnown RBP14.76□□□□□ -0.05
COMMD4-220ENST00000567720 DCLRE1CQ96SD1 692 aaKnown RBP14.76□□□□□ -0.05
COMMD4-220ENST00000567720 OR2J1Q9GZK6 312 aa14.76□□□□□ -0.05
COMMD4-220ENST00000567720 ELOVL3Q9HB03 270 aa14.76□□□□□ -0.05
COMMD4-220ENST00000567720 TBCCD1Q9NVR7 557 aa14.76□□□□□ -0.05
COMMD4-220ENST00000567720 KLHDC2Q9Y2U9 406 aa14.76□□□□□ -0.05
COMMD4-220ENST00000567720 ACANP16112 2415 aa14.76□□□□□ -0.05
COMMD4-220ENST00000567720 MED13LQ71F56 2210 aa14.76□□□□□ -0.05
COMMD4-220ENST00000567720 ZANQ9Y493 2812 aa14.75□□□□□ -0.05
COMMD4-220ENST00000567720 A0A1W2PPW3 197 aa14.75□□□□□ -0.05
COMMD4-220ENST00000567720 ZNF878C9JN71 531 aa14.75□□□□□ -0.05
COMMD4-220ENST00000567720 DLGAP1O14490 977 aa14.75□□□□□ -0.05
COMMD4-220ENST00000567720 MRPL3P09001 348 aaKnown RBP14.75□□□□□ -0.05
COMMD4-220ENST00000567720 ACSM4P0C7M7 580 aa14.75□□□□□ -0.05
COMMD4-220ENST00000567720 OTX1P32242 354 aaPredicted RBP14.75□□□□□ -0.05
COMMD4-220ENST00000567720 ALDH3B1P43353 468 aa14.75□□□□□ -0.05
COMMD4-220ENST00000567720 EVX1P49640 407 aa14.75□□□□□ -0.05
COMMD4-220ENST00000567720 KLF3P57682 345 aaPredicted RBP14.75□□□□□ -0.05
COMMD4-220ENST00000567720 CDC42P60953 191 aa14.75□□□□□ -0.05
COMMD4-220ENST00000567720 ECH1Q13011 328 aa14.75□□□□□ -0.05
COMMD4-220ENST00000567720 GGTLC2Q14390 218 aa14.75□□□□□ -0.05
COMMD4-220ENST00000567720 LRRC36Q1X8D7 754 aa14.75□□□□□ -0.05
COMMD4-220ENST00000567720 SPATC1Q76KD6 591 aa14.75□□□□□ -0.05
COMMD4-220ENST00000567720 OTOSQ8NHW6 89 aa14.75□□□□□ -0.05
COMMD4-220ENST00000567720 SYNPRQ8TBG9 265 aa14.75□□□□□ -0.05
COMMD4-220ENST00000567720 TEAD3Q99594 435 aa14.75□□□□□ -0.05
COMMD4-220ENST00000567720 ABHD6Q9BV23 337 aa14.75□□□□□ -0.05
COMMD4-220ENST00000567720 DYNLRB1Q9NP97 96 aa14.75□□□□□ -0.05
COMMD4-220ENST00000567720 DNAJC27Q9NZQ0 273 aa14.75□□□□□ -0.05
COMMD4-220ENST00000567720 DUSP13Q9UII6 198 aa14.75□□□□□ -0.05
COMMD4-220ENST00000567720 PMF1-BGLAPU3KQ54 211 aa14.75□□□□□ -0.05
COMMD4-220ENST00000567720 VSTM5A8MXK1 200 aa14.74□□□□□ -0.05
COMMD4-220ENST00000567720 F5H5K5 113 aa14.74□□□□□ -0.05
COMMD4-220ENST00000567720 H3BSA7 217 aa14.74□□□□□ -0.05
COMMD4-220ENST00000567720 J3QW42 95 aa14.74□□□□□ -0.05
COMMD4-220ENST00000567720 M0R135 149 aa14.74□□□□□ -0.05
COMMD4-220ENST00000567720 M0R233 179 aa14.74□□□□□ -0.05
COMMD4-220ENST00000567720 LY6HO94772 140 aa14.74□□□□□ -0.05
COMMD4-220ENST00000567720 ALKBH6Q3KRA9 238 aa14.74□□□□□ -0.05
COMMD4-220ENST00000567720 MBNL2Q5VZF2 373 aaKnown RBP14.74□□□□□ -0.05
COMMD4-220ENST00000567720 ARL9Q6T311 187 aa14.74□□□□□ -0.05
COMMD4-220ENST00000567720 UNQ6126/PRO20091Q6UXV3 157 aa14.74□□□□□ -0.05
COMMD4-220ENST00000567720 MEPCEQ7L2J0 689 aaKnown RBP14.74□□□□□ -0.05
COMMD4-220ENST00000567720 GID4Q8IVV7 300 aa14.74□□□□□ -0.05
COMMD4-220ENST00000567720 ZCCHC24Q8N2G6 241 aaKnown RBP14.74□□□□□ -0.05
COMMD4-220ENST00000567720 RFLNBQ8N5W9 214 aa14.74□□□□□ -0.05
COMMD4-220ENST00000567720 OR8J1Q8NGP2 316 aa14.74□□□□□ -0.05
COMMD4-220ENST00000567720 KLF14Q8TD94 323 aaPredicted RBP14.74□□□□□ -0.05
COMMD4-220ENST00000567720 RNF133Q8WVZ7 376 aa14.74□□□□□ -0.05
COMMD4-220ENST00000567720 GTF3AQ92664 365 aaKnown RBP14.74□□□□□ -0.05
COMMD4-220ENST00000567720 ZNF799Q96GE5 643 aa14.74□□□□□ -0.05
COMMD4-220ENST00000567720 COPS4Q9BT78 406 aa14.74□□□□□ -0.05
COMMD4-220ENST00000567720 STARD10Q9Y365 291 aa14.74□□□□□ -0.05
COMMD4-220ENST00000567720 TEP1Q99973 2627 aaKnown RBP14.74□□□□□ -0.05
COMMD4-220ENST00000567720 SLC22A31A6NKX4 558 aa14.73□□□□□ -0.05
COMMD4-220ENST00000567720 CASQ2O14958 399 aaPredicted RBP14.73□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 71 ms