RNA–Protein interactions for RNA: ENST00000567704.5

CSPG4P13-202, Transcript of chondroitin sulfate proteoglycan 4 pseudogene 13, humanhuman

BASIC

Gene CSPG4P13, Length 4,801 nt, Biotype transcribed unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG4P13-202ENST00000567704 ERVK-16P61578 105 aa11.28□□□□□ -0.6
CSPG4P13-202ENST00000567704 MIDNQ504T8 468 aa11.28□□□□□ -0.6
CSPG4P13-202ENST00000567704 EXD3Q8N9H8 876 aa11.28□□□□□ -0.6
CSPG4P13-202ENST00000567704 OR4D9Q8NGE8 314 aa11.28□□□□□ -0.6
CSPG4P13-202ENST00000567704 OR5M9Q8NGP3 310 aa11.28□□□□□ -0.6
CSPG4P13-202ENST00000567704 PSMF1Q92530 271 aa11.28□□□□□ -0.6
CSPG4P13-202ENST00000567704 TRMT61AQ96FX7 289 aaKnown RBP11.28□□□□□ -0.6
CSPG4P13-202ENST00000567704 LRFN5Q96NI6 719 aa11.28□□□□□ -0.6
CSPG4P13-202ENST00000567704 OR51B6Q9H340 312 aa11.28□□□□□ -0.6
CSPG4P13-202ENST00000567704 NSG2Q9Y328 171 aa11.28□□□□□ -0.6
CSPG4P13-202ENST00000567704 QDPRP09417 244 aa11.28□□□□□ -0.6
CSPG4P13-202ENST00000567704 HOXA1P49639 335 aaPredicted RBP11.28□□□□□ -0.6
CSPG4P13-202ENST00000567704 GABREP78334 506 aa11.28□□□□□ -0.6
CSPG4P13-202ENST00000567704 NCMAPQ5T1S8 102 aa11.28□□□□□ -0.6
CSPG4P13-202ENST00000567704 DBX2Q6ZNG2 339 aa11.28□□□□□ -0.6
CSPG4P13-202ENST00000567704 ZC3HAV1Q7Z2W4 902 aaKnown RBP11.28□□□□□ -0.6
CSPG4P13-202ENST00000567704 EMG1Q92979 244 aaKnown RBP11.28□□□□□ -0.6
CSPG4P13-202ENST00000567704 ZG16BQ96DA0 208 aa11.28□□□□□ -0.6
CSPG4P13-202ENST00000567704 VPS25Q9BRG1 176 aa11.28□□□□□ -0.6
CSPG4P13-202ENST00000567704 ZCCHC4Q9H5U6 513 aa11.28□□□□□ -0.6
CSPG4P13-202ENST00000567704 FLVCR1Q9Y5Y0 555 aa11.28□□□□□ -0.6
CSPG4P13-202ENST00000567704 TUBGCP6Q96RT7 1819 aa11.28□□□□□ -0.6
CSPG4P13-202ENST00000567704 KCNE1BA0A087WTH5 132 aa11.28□□□□□ -0.6
CSPG4P13-202ENST00000567704 TRAPPC2LH3BP13 241 aa11.28□□□□□ -0.6
CSPG4P13-202ENST00000567704 ZFPL1O95159 310 aa11.28□□□□□ -0.6
CSPG4P13-202ENST00000567704 TMEM176BQ3YBM2 270 aaPredicted RBP11.28□□□□□ -0.6
CSPG4P13-202ENST00000567704 WDR88Q6ZMY6 472 aa11.28□□□□□ -0.6
CSPG4P13-202ENST00000567704 TMEM18Q96B42 140 aa11.28□□□□□ -0.6
CSPG4P13-202ENST00000567704 CMTM3Q96MX0 182 aa11.28□□□□□ -0.6
CSPG4P13-202ENST00000567704 NRSN2Q9GZP1 204 aa11.28□□□□□ -0.6
CSPG4P13-202ENST00000567704 SLCO1C1Q9NYB5 712 aa11.28□□□□□ -0.6
CSPG4P13-202ENST00000567704 LRIT1Q9P2V4 623 aa11.28□□□□□ -0.6
CSPG4P13-202ENST00000567704 OR14J1Q9UGF5 321 aa11.28□□□□□ -0.6
CSPG4P13-202ENST00000567704 GDF2Q9UK05 429 aaPredicted RBP11.28□□□□□ -0.6
CSPG4P13-202ENST00000567704 SLC17A2O00624 439 aa11.27□□□□□ -0.6
CSPG4P13-202ENST00000567704 FGF17O60258 216 aa11.27□□□□□ -0.6
CSPG4P13-202ENST00000567704 CD63P08962 238 aa11.27□□□□□ -0.6
CSPG4P13-202ENST00000567704 MLF1P58340 268 aa11.27□□□□□ -0.6
CSPG4P13-202ENST00000567704 SRYQ05066 204 aa11.27□□□□□ -0.6
CSPG4P13-202ENST00000567704 ADAMTSL4Q6UY14 1074 aa11.27□□□□□ -0.6
CSPG4P13-202ENST00000567704 PLXDC1Q8IUK5 500 aa11.27□□□□□ -0.6
CSPG4P13-202ENST00000567704 OR14A16Q8NHC5 309 aa11.27□□□□□ -0.6
CSPG4P13-202ENST00000567704 OR51E1Q8TCB6 317 aa11.27□□□□□ -0.6
CSPG4P13-202ENST00000567704 EMC6Q9BV81 110 aa11.27□□□□□ -0.6
CSPG4P13-202ENST00000567704 ARGFXA6NJG6 315 aa11.27□□□□□ -0.61
CSPG4P13-202ENST00000567704 LY86O95711 162 aa11.27□□□□□ -0.61
CSPG4P13-202ENST00000567704 CRYBA1P05813 215 aa11.27□□□□□ -0.61
CSPG4P13-202ENST00000567704 RABIFP47224 123 aa11.27□□□□□ -0.61
CSPG4P13-202ENST00000567704 EEF1A1P68104 462 aaKnown RBP11.27□□□□□ -0.61
CSPG4P13-202ENST00000567704 RPL18Q07020 188 aaKnown RBP11.27□□□□□ -0.61
CSPG4P13-202ENST00000567704 ZNF273Q14593 569 aa11.27□□□□□ -0.61
CSPG4P13-202ENST00000567704 ACKR1Q16570 336 aa11.27□□□□□ -0.61
CSPG4P13-202ENST00000567704 B3GNTL1Q67FW5 361 aaPredicted RBP11.27□□□□□ -0.61
CSPG4P13-202ENST00000567704 OR8G2PQ6IF36 304 aa11.27□□□□□ -0.61
CSPG4P13-202ENST00000567704 BRICD5Q6PL45 260 aa11.27□□□□□ -0.61
CSPG4P13-202ENST00000567704 OR1E3Q8WZA6 343 aa11.27□□□□□ -0.61
CSPG4P13-202ENST00000567704 RPUSD4Q96CM3 377 aaKnown RBP11.27□□□□□ -0.61
CSPG4P13-202ENST00000567704 CHST11Q9NPF2 352 aa11.27□□□□□ -0.61
CSPG4P13-202ENST00000567704 GPR160Q9UJ42 338 aa11.27□□□□□ -0.61
CSPG4P13-202ENST00000567704 RREB1Q92766 1687 aa11.27□□□□□ -0.61
CSPG4P13-202ENST00000567704 KIR2DS5A0A0G2JLQ3 304 aa11.27□□□□□ -0.61
CSPG4P13-202ENST00000567704 A0A0G2JNG1 304 aa11.27□□□□□ -0.61
CSPG4P13-202ENST00000567704 FTCDNL1E5RQL4 147 aa11.27□□□□□ -0.61
CSPG4P13-202ENST00000567704 KIR2DS3K7RE56 304 aa11.27□□□□□ -0.61
CSPG4P13-202ENST00000567704 GALR3O60755 368 aaPredicted RBP11.27□□□□□ -0.61
CSPG4P13-202ENST00000567704 MGST1P10620 155 aaKnown RBP11.27□□□□□ -0.61
CSPG4P13-202ENST00000567704 CD79AP11912 226 aa11.27□□□□□ -0.61
CSPG4P13-202ENST00000567704 KITLGP21583 273 aa11.27□□□□□ -0.61
CSPG4P13-202ENST00000567704 OPRM1P35372 400 aa11.27□□□□□ -0.61
CSPG4P13-202ENST00000567704 SSBP1Q04837 148 aaKnown RBP11.27□□□□□ -0.61
CSPG4P13-202ENST00000567704 PPP1R1AQ13522 171 aa11.27□□□□□ -0.61
CSPG4P13-202ENST00000567704 KIR2DS5Q14953 304 aa11.27□□□□□ -0.61
CSPG4P13-202ENST00000567704 TMEM31Q5JXX7 168 aa11.27□□□□□ -0.61
CSPG4P13-202ENST00000567704 ZNF808Q8N4W9 903 aaPredicted RBP11.27□□□□□ -0.61
CSPG4P13-202ENST00000567704 OR51A2Q8NGJ7 313 aa11.27□□□□□ -0.61
CSPG4P13-202ENST00000567704 ISOC2Q96AB3 205 aa11.27□□□□□ -0.61
CSPG4P13-202ENST00000567704 OPA3Q9H6K4 179 aa11.27□□□□□ -0.61
CSPG4P13-202ENST00000567704 UQCC1Q9NVA1 299 aa11.27□□□□□ -0.61
CSPG4P13-202ENST00000567704 PCDHGA9Q9Y5G4 932 aaKnown RBP11.27□□□□□ -0.61
CSPG4P13-202ENST00000567704 A8MVM7 634 aa11.26□□□□□ -0.61
CSPG4P13-202ENST00000567704 IDSB3KWA1 339 aa11.26□□□□□ -0.61
CSPG4P13-202ENST00000567704 SPP1P10451 314 aa11.26□□□□□ -0.61
CSPG4P13-202ENST00000567704 SLC17A1Q14916 467 aa11.26□□□□□ -0.61
CSPG4P13-202ENST00000567704 TOMM34Q15785 309 aaPredicted RBP11.26□□□□□ -0.61
CSPG4P13-202ENST00000567704 PLA1AQ53H76 456 aa11.26□□□□□ -0.61
CSPG4P13-202ENST00000567704 TMEM128Q5BJH2 165 aa11.26□□□□□ -0.61
CSPG4P13-202ENST00000567704 C1orf140Q5VVS0 124 aa11.26□□□□□ -0.61
CSPG4P13-202ENST00000567704 C17orf99Q6UX52 265 aa11.26□□□□□ -0.61
CSPG4P13-202ENST00000567704 LCORQ96JN0 433 aaPredicted RBP11.26□□□□□ -0.61
CSPG4P13-202ENST00000567704 C20orf141Q9NUB4 165 aa11.26□□□□□ -0.61
CSPG4P13-202ENST00000567704 RNF186Q9NXI6 227 aa11.26□□□□□ -0.61
CSPG4P13-202ENST00000567704 LAMP3Q9UQV4 416 aa11.26□□□□□ -0.61
CSPG4P13-202ENST00000567704 EXOGQ9Y2C4 368 aaKnown RBP11.26□□□□□ -0.61
CSPG4P13-202ENST00000567704 LAMB2P55268 1798 aa11.26□□□□□ -0.61
CSPG4P13-202ENST00000567704 A0A1W2PPQ1 181 aa11.26□□□□□ -0.61
CSPG4P13-202ENST00000567704 H3BNC9 293 aa11.26□□□□□ -0.61
CSPG4P13-202ENST00000567704 MPC2O95563 127 aa11.26□□□□□ -0.61
CSPG4P13-202ENST00000567704 F10P00742 488 aa11.26□□□□□ -0.61
CSPG4P13-202ENST00000567704 HLA-DOBP13765 273 aa11.26□□□□□ -0.61
CSPG4P13-202ENST00000567704 CLDN17P56750 224 aa11.26□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms