RNA–Protein interactions for RNA: ENST00000567071.5

CAPN3-216, Transcript of calpain 3, humanhuman

TSL 4

Gene CAPN3, Length 563 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-216ENST00000567071 IGKV1D-42A0A075B6H8 117 aa8.13□□□□□ -1.11
CAPN3-216ENST00000567071 A0A087WUJ7 227 aa8.13□□□□□ -1.11
CAPN3-216ENST00000567071 ZNF816-ZNF321PA0A0X1KG74 233 aa8.13□□□□□ -1.11
CAPN3-216ENST00000567071 WI2-2373I1.2A0A1W2PRP0 233 aa8.13□□□□□ -1.11
CAPN3-216ENST00000567071 TMEM72A0PK05 275 aa8.13□□□□□ -1.11
CAPN3-216ENST00000567071 ZC3H12DA2A288 527 aaKnown RBP8.13□□□□□ -1.11
CAPN3-216ENST00000567071 PNMTP11086 282 aa8.13□□□□□ -1.11
CAPN3-216ENST00000567071 IFI30P13284 250 aa8.13□□□□□ -1.11
CAPN3-216ENST00000567071 CD80P33681 288 aa8.13□□□□□ -1.11
CAPN3-216ENST00000567071 ARHGDIAP52565 204 aa8.13□□□□□ -1.11
CAPN3-216ENST00000567071 HMGA2P52926 109 aa8.13□□□□□ -1.11
CAPN3-216ENST00000567071 EMX1Q04741 257 aaPredicted RBP8.13□□□□□ -1.11
CAPN3-216ENST00000567071 MSMPQ1L6U9 139 aa8.13□□□□□ -1.11
CAPN3-216ENST00000567071 TTC33Q6PID6 262 aaPredicted RBP8.13□□□□□ -1.11
CAPN3-216ENST00000567071 MBOAT2Q6ZWT7 520 aa8.13□□□□□ -1.11
CAPN3-216ENST00000567071 RRM2BQ7LG56 351 aa8.13□□□□□ -1.11
CAPN3-216ENST00000567071 CCDC36Q8IYA8 594 aa8.13□□□□□ -1.11
CAPN3-216ENST00000567071 ATG16L2Q8NAA4 619 aa8.13□□□□□ -1.11
CAPN3-216ENST00000567071 OR4F17Q8NGA8 305 aa8.13□□□□□ -1.11
CAPN3-216ENST00000567071 TMEM239Q8WW34 195 aa8.13□□□□□ -1.11
CAPN3-216ENST00000567071 ITPKCQ96DU7 683 aa8.13□□□□□ -1.11
CAPN3-216ENST00000567071 NRBF2Q96F24 287 aa8.13□□□□□ -1.11
CAPN3-216ENST00000567071 FAM46AQ96IP4 442 aaKnown RBP8.13□□□□□ -1.11
CAPN3-216ENST00000567071 MPP4Q96JB8 637 aa8.13□□□□□ -1.11
CAPN3-216ENST00000567071 ALKBH3Q96Q83 286 aaPredicted RBP8.13□□□□□ -1.11
CAPN3-216ENST00000567071 OR4F4Q96R69 305 aa8.13□□□□□ -1.11
CAPN3-216ENST00000567071 FEVQ99581 238 aa8.13□□□□□ -1.11
CAPN3-216ENST00000567071 OR11A1Q9GZK7 315 aa8.13□□□□□ -1.11
CAPN3-216ENST00000567071 TOR3AQ9H497 397 aa8.13□□□□□ -1.11
CAPN3-216ENST00000567071 C20orf141Q9NUB4 165 aa8.13□□□□□ -1.11
CAPN3-216ENST00000567071 SLCO1C1Q9NYB5 712 aa8.13□□□□□ -1.11
CAPN3-216ENST00000567071 MED31Q9Y3C7 131 aa8.13□□□□□ -1.11
CAPN3-216ENST00000567071 BTBD17A6NE02 478 aa8.12□□□□□ -1.11
CAPN3-216ENST00000567071 A8MXK9 166 aa8.12□□□□□ -1.11
CAPN3-216ENST00000567071 LRRN3E7EW58 273 aa8.12□□□□□ -1.11
CAPN3-216ENST00000567071 ETV2O00321 342 aaPredicted RBP8.12□□□□□ -1.11
CAPN3-216ENST00000567071 MITFO75030 526 aaPredicted RBP8.12□□□□□ -1.11
CAPN3-216ENST00000567071 CBLP22681 906 aa8.12□□□□□ -1.11
CAPN3-216ENST00000567071 VHLP40337 213 aa8.12□□□□□ -1.11
CAPN3-216ENST00000567071 RBM34P42696 430 aaKnown RBP8.12□□□□□ -1.11
CAPN3-216ENST00000567071 HTR3AP46098 478 aa8.12□□□□□ -1.11
CAPN3-216ENST00000567071 CLK1P49759 484 aaKnown RBP8.12□□□□□ -1.11
CAPN3-216ENST00000567071 DAPP51397 102 aa8.12□□□□□ -1.11
CAPN3-216ENST00000567071 AQP4P55087 323 aa8.12□□□□□ -1.11
CAPN3-216ENST00000567071 KLF3P57682 345 aaPredicted RBP8.12□□□□□ -1.11
CAPN3-216ENST00000567071 SLC35A1P78382 337 aa8.12□□□□□ -1.11
CAPN3-216ENST00000567071 GK3PQ14409 553 aa8.12□□□□□ -1.11
CAPN3-216ENST00000567071 SLC17A1Q14916 467 aa8.12□□□□□ -1.11
CAPN3-216ENST00000567071 MOGQ16653 247 aa8.12□□□□□ -1.11
CAPN3-216ENST00000567071 NSUN5P1Q3KNT7 163 aa8.12□□□□□ -1.11
CAPN3-216ENST00000567071 ZNF770Q6IQ21 691 aaPredicted RBP8.12□□□□□ -1.11
CAPN3-216ENST00000567071 FAHD1Q6P587 224 aa8.12□□□□□ -1.11
CAPN3-216ENST00000567071 C11orf88Q6PI97 169 aa8.12□□□□□ -1.11
CAPN3-216ENST00000567071 IZUMO2Q6UXV1 221 aa8.12□□□□□ -1.11
CAPN3-216ENST00000567071 LINC00114Q6XXX2 140 aa8.12□□□□□ -1.11
CAPN3-216ENST00000567071 ZER1Q7Z7L7 766 aa8.12□□□□□ -1.11
CAPN3-216ENST00000567071 MDP1Q86V88 176 aa8.12□□□□□ -1.11
CAPN3-216ENST00000567071 C10orf53Q8N6V4 93 aa8.12□□□□□ -1.11
CAPN3-216ENST00000567071 C11orf44Q8N8P7 122 aa8.12□□□□□ -1.11
CAPN3-216ENST00000567071 Q8NFD4 153 aa8.12□□□□□ -1.11
CAPN3-216ENST00000567071 R3HDM4Q96D70 268 aa8.12□□□□□ -1.11
CAPN3-216ENST00000567071 NIPSNAP1Q9BPW8 284 aa8.12□□□□□ -1.11
CAPN3-216ENST00000567071 ZNF426Q9BUY5 554 aa8.12□□□□□ -1.11
CAPN3-216ENST00000567071 OSBPL10Q9BXB5 764 aa8.12□□□□□ -1.11
CAPN3-216ENST00000567071 VCXQ9H320 206 aa8.12□□□□□ -1.11
CAPN3-216ENST00000567071 VCX3BQ9H321 246 aa8.12□□□□□ -1.11
CAPN3-216ENST00000567071 DPAGT1Q9H3H5 408 aa8.12□□□□□ -1.11
CAPN3-216ENST00000567071 C12orf10Q9HB07 376 aa8.12□□□□□ -1.11
CAPN3-216ENST00000567071 TMEM165Q9HC07 324 aa8.12□□□□□ -1.11
CAPN3-216ENST00000567071 MEPEQ9NQ76 525 aaPredicted RBP8.12□□□□□ -1.11
CAPN3-216ENST00000567071 KRT84Q9NSB2 600 aa8.12□□□□□ -1.11
CAPN3-216ENST00000567071 CHRNA9Q9UGM1 479 aa8.12□□□□□ -1.11
CAPN3-216ENST00000567071 RPUSD1Q9UJJ7 312 aaKnown RBP8.12□□□□□ -1.11
CAPN3-216ENST00000567071 CACNG2Q9Y698 323 aa8.12□□□□□ -1.11
CAPN3-216ENST00000567071 ARRDC5A6NEK1 342 aa8.11□□□□□ -1.11
CAPN3-216ENST00000567071 TSPAN9O75954 239 aa8.11□□□□□ -1.11
CAPN3-216ENST00000567071 SOX14O95416 240 aa8.11□□□□□ -1.11
CAPN3-216ENST00000567071 HPRP00739 348 aa8.11□□□□□ -1.11
CAPN3-216ENST00000567071 GASTP01350 101 aa8.11□□□□□ -1.11
CAPN3-216ENST00000567071 ALPLP05186 524 aa8.11□□□□□ -1.11
CAPN3-216ENST00000567071 SBK2P0C263 348 aa8.11□□□□□ -1.11
CAPN3-216ENST00000567071 IGLL1P15814 213 aa8.11□□□□□ -1.11
CAPN3-216ENST00000567071 ZNF26P17031 533 aaPredicted RBP8.11□□□□□ -1.11
CAPN3-216ENST00000567071 FUT1P19526 365 aa8.11□□□□□ -1.11
CAPN3-216ENST00000567071 IFNGR2P38484 337 aa8.11□□□□□ -1.11
CAPN3-216ENST00000567071 APOBEC1P41238 236 aaKnown RBP8.11□□□□□ -1.11
CAPN3-216ENST00000567071 RPS5P46782 204 aaKnown RBP8.11□□□□□ -1.11
CAPN3-216ENST00000567071 OMPP47874 163 aa8.11□□□□□ -1.11
CAPN3-216ENST00000567071 SLC6A9P48067 706 aa8.11□□□□□ -1.11
CAPN3-216ENST00000567071 ALDH3A2P51648 485 aa8.11□□□□□ -1.11
CAPN3-216ENST00000567071 GNB2P62879 340 aa8.11□□□□□ -1.11
CAPN3-216ENST00000567071 EGR4Q05215 589 aa8.11□□□□□ -1.11
CAPN3-216ENST00000567071 PRKCDQ05655 676 aa8.11□□□□□ -1.11
CAPN3-216ENST00000567071 TSTQ16762 297 aaKnown RBP8.11□□□□□ -1.11
CAPN3-216ENST00000567071 ZIK1Q3SY52 487 aaPredicted RBP8.11□□□□□ -1.11
CAPN3-216ENST00000567071 RGS7BPQ6MZT1 257 aaPredicted RBP8.11□□□□□ -1.11
CAPN3-216ENST00000567071 VASH1Q7L8A9 365 aaPredicted RBP8.11□□□□□ -1.11
CAPN3-216ENST00000567071 RNF144BQ7Z419 303 aa8.11□□□□□ -1.11
CAPN3-216ENST00000567071 OR13C2Q8NGS9 318 aa8.11□□□□□ -1.11
CAPN3-216ENST00000567071 BPIFA2Q96DR5 249 aa8.11□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 46.5 ms