RNA–Protein interactions for RNA: ENST00000566409.1

FANCA-220, Transcript of FA complementation group A, humanhuman

TSL 1 (best)

Gene FANCA, Length 395 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FANCA-220ENST00000566409 GSTM3P21266 225 aa12.4□□□□□ -0.42
FANCA-220ENST00000566409 TUBG1P23258 451 aa12.4□□□□□ -0.42
FANCA-220ENST00000566409 IFNGR2P38484 337 aa12.4□□□□□ -0.42
FANCA-220ENST00000566409 HLXQ14774 488 aaPredicted RBP12.4□□□□□ -0.42
FANCA-220ENST00000566409 KRTAP27-1Q3LI81 207 aa12.4□□□□□ -0.42
FANCA-220ENST00000566409 CLEC12AQ5QGZ9 265 aa12.4□□□□□ -0.42
FANCA-220ENST00000566409 SLC35F1Q5T1Q4 408 aa12.4□□□□□ -0.42
FANCA-220ENST00000566409 LCN8Q6JVE9 175 aa12.4□□□□□ -0.42
FANCA-220ENST00000566409 SLC18B1Q6NT16 456 aa12.4□□□□□ -0.42
FANCA-220ENST00000566409 DNM1P34Q6PK57 102 aa12.4□□□□□ -0.42
FANCA-220ENST00000566409 CFAP77Q6ZQR2 320 aa12.4□□□□□ -0.42
FANCA-220ENST00000566409 GLCCI1Q86VQ1 547 aa12.4□□□□□ -0.42
FANCA-220ENST00000566409 JAZF1Q86VZ6 243 aa12.4□□□□□ -0.42
FANCA-220ENST00000566409 SDR9C7Q8NEX9 313 aa12.4□□□□□ -0.42
FANCA-220ENST00000566409 GJC3Q8NFK1 279 aa12.4□□□□□ -0.42
FANCA-220ENST00000566409 OR8D4Q8NGM9 314 aa12.4□□□□□ -0.42
FANCA-220ENST00000566409 TMEM158Q8WZ71 300 aa12.4□□□□□ -0.42
FANCA-220ENST00000566409 HAVCR1Q96D42 359 aa12.4□□□□□ -0.42
FANCA-220ENST00000566409 TRIM15Q9C019 465 aa12.4□□□□□ -0.42
FANCA-220ENST00000566409 TUBG2Q9NRH3 451 aa12.4□□□□□ -0.42
FANCA-220ENST00000566409 MRPL22Q9NWU5 206 aaKnown RBP12.4□□□□□ -0.42
FANCA-220ENST00000566409 CGGBP1Q9UFW8 167 aaPredicted RBP12.4□□□□□ -0.42
FANCA-220ENST00000566409 ATPIF1Q9UII2 106 aa12.4□□□□□ -0.42
FANCA-220ENST00000566409 CLDN25C9JDP6 229 aa12.39□□□□□ -0.43
FANCA-220ENST00000566409 TNFRSF11BO00300 401 aa12.39□□□□□ -0.43
FANCA-220ENST00000566409 BHLHE40O14503 412 aa12.39□□□□□ -0.43
FANCA-220ENST00000566409 IDH3BO43837 385 aa12.39□□□□□ -0.43
FANCA-220ENST00000566409 RENP00797 406 aa12.39□□□□□ -0.43
FANCA-220ENST00000566409 AVPP01185 164 aa12.39□□□□□ -0.43
FANCA-220ENST00000566409 IGHV2-5P01817 119 aa12.39□□□□□ -0.43
FANCA-220ENST00000566409 GGT2P36268 569 aa12.39□□□□□ -0.43
FANCA-220ENST00000566409 TNFAIP6P98066 277 aaPredicted RBP12.39□□□□□ -0.43
FANCA-220ENST00000566409 KHDRBS1Q07666 443 aaKnown RBP eCLIP12.39□□□□□ -0.43
FANCA-220ENST00000566409 TRIM25Q14258 630 aaKnown RBP12.39□□□□□ -0.43
FANCA-220ENST00000566409 C1orf229Q6ZS94 237 aaPredicted RBP12.39□□□□□ -0.43
FANCA-220ENST00000566409 LINC00346Q8IVM7 164 aa12.39□□□□□ -0.43
FANCA-220ENST00000566409 OR52E2Q8NGJ4 325 aa12.39□□□□□ -0.43
FANCA-220ENST00000566409 PTP4A1Q93096 173 aa12.39□□□□□ -0.43
FANCA-220ENST00000566409 CLPTM1LQ96KA5 538 aa12.39□□□□□ -0.43
FANCA-220ENST00000566409 DCLRE1CQ96SD1 692 aaKnown RBP12.39□□□□□ -0.43
FANCA-220ENST00000566409 DIRC2Q96SL1 478 aa12.39□□□□□ -0.43
FANCA-220ENST00000566409 COQ7Q99807 217 aa12.39□□□□□ -0.43
FANCA-220ENST00000566409 EGLN1Q9GZT9 426 aa12.39□□□□□ -0.43
FANCA-220ENST00000566409 PNRC2Q9NPJ4 139 aaKnown RBP12.39□□□□□ -0.43
FANCA-220ENST00000566409 G6PC2Q9NQR9 355 aa12.39□□□□□ -0.43
FANCA-220ENST00000566409 IL20Q9NYY1 176 aa12.39□□□□□ -0.43
FANCA-220ENST00000566409 CYB5R1Q9UHQ9 305 aa12.39□□□□□ -0.43
FANCA-220ENST00000566409 POLR1DQ9Y2S0 133 aa12.39□□□□□ -0.43
FANCA-220ENST00000566409 CDH10Q9Y6N8 788 aa12.39□□□□□ -0.43
FANCA-220ENST00000566409 PLPP2O43688 288 aa12.38□□□□□ -0.43
FANCA-220ENST00000566409 PSKH1P11801 424 aa12.38□□□□□ -0.43
FANCA-220ENST00000566409 RAC2P15153 192 aa12.38□□□□□ -0.43
FANCA-220ENST00000566409 NOS3P29474 1203 aa12.38□□□□□ -0.43
FANCA-220ENST00000566409 PGM2L1Q6PCE3 622 aa12.38□□□□□ -0.43
FANCA-220ENST00000566409 FBXW12Q6X9E4 464 aa12.38□□□□□ -0.43
FANCA-220ENST00000566409 COLCA1Q6ZS62 124 aa12.38□□□□□ -0.43
FANCA-220ENST00000566409 NAA40Q86UY6 237 aa12.38□□□□□ -0.43
FANCA-220ENST00000566409 DHFR2Q86XF0 187 aa12.38□□□□□ -0.43
FANCA-220ENST00000566409 ARHGAP24Q8N264 748 aa12.38□□□□□ -0.43
FANCA-220ENST00000566409 CYB561A3Q8NBI2 242 aa12.38□□□□□ -0.43
FANCA-220ENST00000566409 CCDC197Q8NCU1 140 aa12.38□□□□□ -0.43
FANCA-220ENST00000566409 OR2Z1Q8NG97 314 aa12.38□□□□□ -0.43
FANCA-220ENST00000566409 OR51F2Q8NH61 342 aa12.38□□□□□ -0.43
FANCA-220ENST00000566409 RAB1CQ92928 201 aa12.38□□□□□ -0.43
FANCA-220ENST00000566409 HDHD2Q9H0R4 259 aa12.38□□□□□ -0.43
FANCA-220ENST00000566409 MAGIXQ9H6Y5 334 aa12.38□□□□□ -0.43
FANCA-220ENST00000566409 TAS2R1Q9NYW7 299 aa12.38□□□□□ -0.43
FANCA-220ENST00000566409 PTTG3PQ9NZH4 202 aa12.38□□□□□ -0.43
FANCA-220ENST00000566409 CALB2P22676 271 aa12.37□□□□□ -0.43
FANCA-220ENST00000566409 PYCR1P32322 319 aa12.37□□□□□ -0.43
FANCA-220ENST00000566409 SRP14P37108 136 aaKnown RBP12.37□□□□□ -0.43
FANCA-220ENST00000566409 RPS27P42677 84 aaKnown RBP12.37□□□□□ -0.43
FANCA-220ENST00000566409 RGS6P49758 472 aa12.37□□□□□ -0.43
FANCA-220ENST00000566409 PRSS12P56730 875 aa12.37□□□□□ -0.43
FANCA-220ENST00000566409 ZMAT1Q5H9K5 638 aa12.37□□□□□ -0.43
FANCA-220ENST00000566409 OR2T2Q6IF00 324 aa12.37□□□□□ -0.43
FANCA-220ENST00000566409 ACSM5Q6NUN0 579 aa12.37□□□□□ -0.43
FANCA-220ENST00000566409 LYPD4Q6UWN0 246 aa12.37□□□□□ -0.43
FANCA-220ENST00000566409 RASSF6Q6ZTQ3 369 aa12.37□□□□□ -0.43
FANCA-220ENST00000566409 ZNF771Q7L3S4 317 aaPredicted RBP12.37□□□□□ -0.43
FANCA-220ENST00000566409 OR5AS1Q8N127 324 aa12.37□□□□□ -0.43
FANCA-220ENST00000566409 LINC00471Q8N535 108 aa12.37□□□□□ -0.43
FANCA-220ENST00000566409 OR10S1Q8NGN2 331 aa12.37□□□□□ -0.43
FANCA-220ENST00000566409 APOBEC3DQ96AK3 386 aaPredicted RBP12.37□□□□□ -0.43
FANCA-220ENST00000566409 TIMD4Q96H15 378 aa12.37□□□□□ -0.43
FANCA-220ENST00000566409 MAP6Q96JE9 813 aa12.37□□□□□ -0.43
FANCA-220ENST00000566409 COG8Q96MW5 612 aa12.37□□□□□ -0.43
FANCA-220ENST00000566409 MUC13Q9H3R2 512 aa12.37□□□□□ -0.43
FANCA-220ENST00000566409 WDR76Q9H967 626 aa12.37□□□□□ -0.43
FANCA-220ENST00000566409 U3KQV3 271 aa12.37□□□□□ -0.43
FANCA-220ENST00000566409 TRAV20A0A0B4J274 112 aa12.36□□□□□ -0.43
FANCA-220ENST00000566409 J3QW42 95 aa12.36□□□□□ -0.43
FANCA-220ENST00000566409 ACOT8O14734 319 aa12.36□□□□□ -0.43
FANCA-220ENST00000566409 CCNB2O95067 398 aa12.36□□□□□ -0.43
FANCA-220ENST00000566409 IGHV2-70P01814 119 aa12.36□□□□□ -0.43
FANCA-220ENST00000566409 ACSM4P0C7M7 580 aa12.36□□□□□ -0.43
FANCA-220ENST00000566409 ANOS1P23352 680 aa12.36□□□□□ -0.43
FANCA-220ENST00000566409 MICAQ29983 383 aa12.36□□□□□ -0.43
FANCA-220ENST00000566409 OR2T5Q6IEZ7 315 aa12.36□□□□□ -0.43
FANCA-220ENST00000566409 FAHD2BQ6P2I3 314 aaPredicted RBP12.36□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms