RNA–Protein interactions for RNA: ENST00000566347.5

CLN6-207, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 1 (best) BASIC

Gene CLN6, Length 981 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-207ENST00000566347 HIST1H3AP68431 136 aa17.04■□□□□ 0.32
CLN6-207ENST00000566347 SPATS1Q496A3 300 aa17.04■□□□□ 0.32
CLN6-207ENST00000566347 HIST2H3PS2Q5TEC6 136 aa17.04■□□□□ 0.32
CLN6-207ENST00000566347 LEG1Q6P5S2 330 aa17.04■□□□□ 0.32
CLN6-207ENST00000566347 FBXW12Q6X9E4 464 aa17.04■□□□□ 0.32
CLN6-207ENST00000566347 HIST2H3AQ71DI3 136 aa17.04■□□□□ 0.32
CLN6-207ENST00000566347 SPICQ8N5J4 248 aa17.04■□□□□ 0.32
CLN6-207ENST00000566347 SEMA6DQ8NFY4 1073 aa17.04■□□□□ 0.32
CLN6-207ENST00000566347 APOBEC3DQ96AK3 386 aaPredicted RBP17.04■□□□□ 0.32
CLN6-207ENST00000566347 TSSK2Q96PF2 358 aa17.04■□□□□ 0.32
CLN6-207ENST00000566347 CDRT15Q96T59 188 aa17.04■□□□□ 0.32
CLN6-207ENST00000566347 NDE1Q9NXR1 346 aa17.04■□□□□ 0.32
CLN6-207ENST00000566347 TAGLN3Q9UI15 199 aa17.04■□□□□ 0.32
CLN6-207ENST00000566347 PCDHB10Q9UN67 800 aa17.04■□□□□ 0.32
CLN6-207ENST00000566347 B9D1Q9UPM9 204 aa17.04■□□□□ 0.32
CLN6-207ENST00000566347 LHFPL6Q9Y693 200 aa17.04■□□□□ 0.32
CLN6-207ENST00000566347 PPIAL4EA0A075B759 164 aa17.03■□□□□ 0.32
CLN6-207ENST00000566347 IGLV1-36A0A0B4J1U3 117 aa17.03■□□□□ 0.32
CLN6-207ENST00000566347 PPIAL4CA0A0B4J2A2 164 aa17.03■□□□□ 0.32
CLN6-207ENST00000566347 PPIAL4DF5H284 164 aa17.03■□□□□ 0.32
CLN6-207ENST00000566347 DCTN6O00399 190 aa17.03■□□□□ 0.32
CLN6-207ENST00000566347 ARPC2O15144 300 aa17.03■□□□□ 0.32
CLN6-207ENST00000566347 IDH3BO43837 385 aa17.03■□□□□ 0.32
CLN6-207ENST00000566347 FOXH1O75593 365 aa17.03■□□□□ 0.32
CLN6-207ENST00000566347 AVPP01185 164 aa17.03■□□□□ 0.32
CLN6-207ENST00000566347 DBHP09172 617 aa17.03■□□□□ 0.32
CLN6-207ENST00000566347 SBK2P0C263 348 aa17.03■□□□□ 0.32
CLN6-207ENST00000566347 PPIAL4FP0DN26 164 aa17.03■□□□□ 0.32
CLN6-207ENST00000566347 NOS3P29474 1203 aa17.03■□□□□ 0.32
CLN6-207ENST00000566347 COX10Q12887 443 aa17.03■□□□□ 0.32
CLN6-207ENST00000566347 TMEM155Q4W5P6 130 aa17.03■□□□□ 0.32
CLN6-207ENST00000566347 SLC27A4Q6P1M0 643 aa17.03■□□□□ 0.32
CLN6-207ENST00000566347 USP43Q70EL4 1123 aa17.03■□□□□ 0.32
CLN6-207ENST00000566347 ZNF771Q7L3S4 317 aaPredicted RBP17.03■□□□□ 0.32
CLN6-207ENST00000566347 ZSCAN2Q7Z7L9 614 aaPredicted RBP17.03■□□□□ 0.32
CLN6-207ENST00000566347 KLHL36Q8N4N3 616 aa17.03■□□□□ 0.32
CLN6-207ENST00000566347 NANPQ8TBE9 248 aa17.03■□□□□ 0.32
CLN6-207ENST00000566347 NMNAT3Q96T66 252 aa17.03■□□□□ 0.32
CLN6-207ENST00000566347 IFT27Q9BW83 186 aa17.03■□□□□ 0.32
CLN6-207ENST00000566347 SRA1Q9HD15 236 aaKnown RBP17.03■□□□□ 0.32
CLN6-207ENST00000566347 IL1RAPQ9NPH3 570 aa17.03■□□□□ 0.32
CLN6-207ENST00000566347 PPP1R3CQ9UQK1 317 aa17.03■□□□□ 0.32
CLN6-207ENST00000566347 IFNL4K9M1U5 179 aa17.02■□□□□ 0.32
CLN6-207ENST00000566347 GPANK1O95872 356 aa17.02■□□□□ 0.32
CLN6-207ENST00000566347 HIST1H1CP16403 213 aaKnown RBP17.02■□□□□ 0.32
CLN6-207ENST00000566347 RRM2P31350 389 aa17.02■□□□□ 0.32
CLN6-207ENST00000566347 LCN2P80188 198 aa17.02■□□□□ 0.32
CLN6-207ENST00000566347 MEP1BQ16820 701 aa17.02■□□□□ 0.32
CLN6-207ENST00000566347 SLC36A3Q495N2 470 aa17.02■□□□□ 0.32
CLN6-207ENST00000566347 C16orf89Q6UX73 402 aa17.02■□□□□ 0.32
CLN6-207ENST00000566347 OR6V1Q8N148 313 aa17.02■□□□□ 0.32
CLN6-207ENST00000566347 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP17.02■□□□□ 0.32
CLN6-207ENST00000566347 SLC26A10Q8NG04 563 aa17.02■□□□□ 0.32
CLN6-207ENST00000566347 OR4K13Q8NH42 304 aa17.02■□□□□ 0.32
CLN6-207ENST00000566347 ITLN1Q8WWA0 313 aa17.02■□□□□ 0.32
CLN6-207ENST00000566347 OR2V2Q96R30 315 aa17.02■□□□□ 0.32
CLN6-207ENST00000566347 JMJD8Q96S16 334 aa17.02■□□□□ 0.32
CLN6-207ENST00000566347 C7orf69Q9H7B7 122 aa17.02■□□□□ 0.32
CLN6-207ENST00000566347 DCAF16Q9NXF7 216 aa17.02■□□□□ 0.32
CLN6-207ENST00000566347 PTTG3PQ9NZH4 202 aa17.02■□□□□ 0.32
CLN6-207ENST00000566347 ARL2BPQ9Y2Y0 163 aa17.02■□□□□ 0.32
CLN6-207ENST00000566347 DCTN3O75935 186 aa17.01■□□□□ 0.31
CLN6-207ENST00000566347 MSX2P35548 267 aaPredicted RBP17.01■□□□□ 0.31
CLN6-207ENST00000566347 GSSP48637 474 aa17.01■□□□□ 0.31
CLN6-207ENST00000566347 ERFP50548 548 aa17.01■□□□□ 0.31
CLN6-207ENST00000566347 BTG1P62324 171 aa17.01■□□□□ 0.31
CLN6-207ENST00000566347 TSPAN31Q12999 210 aa17.01■□□□□ 0.31
CLN6-207ENST00000566347 ECH1Q13011 328 aa17.01■□□□□ 0.31
CLN6-207ENST00000566347 HLXQ14774 488 aaPredicted RBP17.01■□□□□ 0.31
CLN6-207ENST00000566347 ZBTB46Q86UZ6 589 aa17.01■□□□□ 0.31
CLN6-207ENST00000566347 LRRC28Q86X40 367 aaPredicted RBP17.01■□□□□ 0.31
CLN6-207ENST00000566347 OR5AS1Q8N127 324 aa17.01■□□□□ 0.31
CLN6-207ENST00000566347 ATG16L2Q8NAA4 619 aa17.01■□□□□ 0.31
CLN6-207ENST00000566347 OR8G5Q8NG78 346 aa17.01■□□□□ 0.31
CLN6-207ENST00000566347 OR13G1Q8NGZ3 307 aa17.01■□□□□ 0.31
CLN6-207ENST00000566347 GNPDA2Q8TDQ7 276 aa17.01■□□□□ 0.31
CLN6-207ENST00000566347 ZNF582Q96NG8 517 aaPredicted RBP17.01■□□□□ 0.31
CLN6-207ENST00000566347 RPRD1BQ9NQG5 326 aaKnown RBP17.01■□□□□ 0.31
CLN6-207ENST00000566347 ARHGAP32A7KAX9 2087 aa17■□□□□ 0.31
CLN6-207ENST00000566347 KRT36O76013 467 aa17■□□□□ 0.31
CLN6-207ENST00000566347 ADRA2CP18825 462 aa17■□□□□ 0.31
CLN6-207ENST00000566347 HILS1P60008 231 aa17■□□□□ 0.31
CLN6-207ENST00000566347 MXRA7P84157 204 aa17■□□□□ 0.31
CLN6-207ENST00000566347 OR2T2Q6IF00 324 aa17■□□□□ 0.31
CLN6-207ENST00000566347 RPL13AP3Q6NVV1 102 aa17■□□□□ 0.31
CLN6-207ENST00000566347 CORO6Q6QEF8 472 aa17■□□□□ 0.31
CLN6-207ENST00000566347 ZNF620Q6ZNG0 422 aa17■□□□□ 0.31
CLN6-207ENST00000566347 ZDHHC21Q8IVQ6 265 aa17■□□□□ 0.31
CLN6-207ENST00000566347 DEFB107AQ8IZN7 70 aa17■□□□□ 0.31
CLN6-207ENST00000566347 SIGLEC11Q96RL6 698 aa17■□□□□ 0.31
CLN6-207ENST00000566347 CDADC1Q9BWV3 514 aa17■□□□□ 0.31
CLN6-207ENST00000566347 SUCNR1Q9BXA5 334 aa17■□□□□ 0.31
CLN6-207ENST00000566347 PATZ1Q9HBE1 687 aaKnown RBP17■□□□□ 0.31
CLN6-207ENST00000566347 GCM1Q9NP62 436 aa17■□□□□ 0.31
CLN6-207ENST00000566347 ARL8BQ9NVJ2 186 aa17■□□□□ 0.31
CLN6-207ENST00000566347 SELEP16581 610 aa16.99■□□□□ 0.31
CLN6-207ENST00000566347 MDH2P40926 338 aaKnown RBP16.99■□□□□ 0.31
CLN6-207ENST00000566347 SRP9P49458 86 aaKnown RBP16.99■□□□□ 0.31
CLN6-207ENST00000566347 MNAT1P51948 309 aa16.99■□□□□ 0.31
CLN6-207ENST00000566347 GNGT1P63211 74 aa16.99■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 63.3 ms