RNA–Protein interactions for RNA: ENST00000566016.5

SHCBP1-205, Transcript of SHC binding and spindle associated 1, humanhuman

TSL 1 (best)

Gene SHCBP1, Length 1,482 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHCBP1-205ENST00000566016 SHFQ7M4L6 423 aa18.1■□□□□ 0.49
SHCBP1-205ENST00000566016 BBS1Q8NFJ9 593 aa18.1■□□□□ 0.49
SHCBP1-205ENST00000566016 OR1J1Q8NGS3 322 aa18.1■□□□□ 0.49
SHCBP1-205ENST00000566016 ST7LQ8TDW4 575 aa18.1■□□□□ 0.49
SHCBP1-205ENST00000566016 BARX1Q9HBU1 254 aaPredicted RBP18.1■□□□□ 0.49
SHCBP1-205ENST00000566016 C8orf4Q9NR00 106 aa18.1■□□□□ 0.49
SHCBP1-205ENST00000566016 ACANP16112 2415 aa18.1■□□□□ 0.49
SHCBP1-205ENST00000566016 OTX1P32242 354 aaPredicted RBP18.09■□□□□ 0.49
SHCBP1-205ENST00000566016 RPS27P42677 84 aaKnown RBP18.09■□□□□ 0.49
SHCBP1-205ENST00000566016 SELENOVP59797 346 aa18.09■□□□□ 0.49
SHCBP1-205ENST00000566016 KLHL12Q53G59 568 aa18.09■□□□□ 0.49
SHCBP1-205ENST00000566016 DCXRQ7Z4W1 244 aa18.09■□□□□ 0.49
SHCBP1-205ENST00000566016 ERI1Q8IV48 349 aaKnown RBP18.09■□□□□ 0.49
SHCBP1-205ENST00000566016 TCEANCQ8N8B7 351 aa18.09■□□□□ 0.49
SHCBP1-205ENST00000566016 OR10S1Q8NGN2 331 aa18.09■□□□□ 0.49
SHCBP1-205ENST00000566016 OR8J1Q8NGP2 316 aa18.09■□□□□ 0.49
SHCBP1-205ENST00000566016 ABHD4Q8TB40 342 aa18.09■□□□□ 0.49
SHCBP1-205ENST00000566016 SLC7A6Q92536 515 aa18.09■□□□□ 0.49
SHCBP1-205ENST00000566016 ZMYND19Q96E35 227 aaPredicted RBP18.09■□□□□ 0.49
SHCBP1-205ENST00000566016 SLC29A1Q99808 456 aa18.09■□□□□ 0.49
SHCBP1-205ENST00000566016 OR51B6Q9H340 312 aa18.09■□□□□ 0.49
SHCBP1-205ENST00000566016 TLX2O43763 284 aaPredicted RBP18.08■□□□□ 0.49
SHCBP1-205ENST00000566016 KLF3P57682 345 aaPredicted RBP18.08■□□□□ 0.49
SHCBP1-205ENST00000566016 CDC42P60953 191 aa18.08■□□□□ 0.49
SHCBP1-205ENST00000566016 ERVS71-1P61550 626 aa18.08■□□□□ 0.49
SHCBP1-205ENST00000566016 PPP1CBP62140 327 aa18.08■□□□□ 0.49
SHCBP1-205ENST00000566016 APOFQ13790 326 aa18.08■□□□□ 0.49
SHCBP1-205ENST00000566016 RSPO1Q2MKA7 263 aaPredicted RBP18.08■□□□□ 0.49
SHCBP1-205ENST00000566016 Q5PR19 223 aa18.08■□□□□ 0.49
SHCBP1-205ENST00000566016 LCN1P1Q5VSP4 162 aa18.08■□□□□ 0.49
SHCBP1-205ENST00000566016 AADACL4Q5VUY2 407 aa18.08■□□□□ 0.49
SHCBP1-205ENST00000566016 MBNL2Q5VZF2 373 aaKnown RBP18.08■□□□□ 0.49
SHCBP1-205ENST00000566016 DPY19L4Q7Z388 723 aa18.08■□□□□ 0.49
SHCBP1-205ENST00000566016 GID4Q8IVV7 300 aa18.08■□□□□ 0.49
SHCBP1-205ENST00000566016 OR6N2Q8NGY6 317 aa18.08■□□□□ 0.49
SHCBP1-205ENST00000566016 SYNPRQ8TBG9 265 aa18.08■□□□□ 0.49
SHCBP1-205ENST00000566016 MARS2Q96GW9 593 aaKnown RBP18.08■□□□□ 0.49
SHCBP1-205ENST00000566016 RDH12Q96NR8 316 aa18.08■□□□□ 0.49
SHCBP1-205ENST00000566016 TEAD3Q99594 435 aa18.08■□□□□ 0.49
SHCBP1-205ENST00000566016 ZNF878C9JN71 531 aa18.07■□□□□ 0.48
SHCBP1-205ENST00000566016 M0R233 179 aa18.07■□□□□ 0.48
SHCBP1-205ENST00000566016 NGFP01138 241 aa18.07■□□□□ 0.48
SHCBP1-205ENST00000566016 IGHV4-39P01824 125 aa18.07■□□□□ 0.48
SHCBP1-205ENST00000566016 DBHP09172 617 aa18.07■□□□□ 0.48
SHCBP1-205ENST00000566016 RPS7P62081 194 aaKnown RBP18.07■□□□□ 0.48
SHCBP1-205ENST00000566016 GGTLC2Q14390 218 aa18.07■□□□□ 0.48
SHCBP1-205ENST00000566016 ZNF718Q3SXZ3 478 aa18.07■□□□□ 0.48
SHCBP1-205ENST00000566016 COLCA1Q6ZS62 124 aa18.07■□□□□ 0.48
SHCBP1-205ENST00000566016 ZNF454Q8N9F8 522 aa18.07■□□□□ 0.48
SHCBP1-205ENST00000566016 TRUB1Q8WWH5 349 aaKnown RBP18.07■□□□□ 0.48
SHCBP1-205ENST00000566016 TOR3AQ9H497 397 aa18.07■□□□□ 0.48
SHCBP1-205ENST00000566016 GRIP1Q9Y3R0 1128 aa18.07■□□□□ 0.48
SHCBP1-205ENST00000566016 MED13LQ71F56 2210 aa18.07■□□□□ 0.48
SHCBP1-205ENST00000566016 ZNF469Q96JG9 3925 aaPredicted RBP18.07■□□□□ 0.48
SHCBP1-205ENST00000566016 CCDC182A6NF36 153 aa18.07■□□□□ 0.48
SHCBP1-205ENST00000566016 SLC22A31A6NKX4 558 aa18.07■□□□□ 0.48
SHCBP1-205ENST00000566016 M0R129 80 aa18.07■□□□□ 0.48
SHCBP1-205ENST00000566016 IGHV3-13P01766 116 aa18.07■□□□□ 0.48
SHCBP1-205ENST00000566016 ACSM4P0C7M7 580 aa18.07■□□□□ 0.48
SHCBP1-205ENST00000566016 NUDT6P53370 316 aa18.07■□□□□ 0.48
SHCBP1-205ENST00000566016 ELF3P78545 371 aaPredicted RBP18.07■□□□□ 0.48
SHCBP1-205ENST00000566016 TMEM154Q6P9G4 183 aa18.07■□□□□ 0.48
SHCBP1-205ENST00000566016 OTOSQ8NHW6 89 aa18.07■□□□□ 0.48
SHCBP1-205ENST00000566016 KLF14Q8TD94 323 aaPredicted RBP18.07■□□□□ 0.48
SHCBP1-205ENST00000566016 RNF133Q8WVZ7 376 aa18.07■□□□□ 0.48
SHCBP1-205ENST00000566016 SPTSSAQ969W0 71 aa18.07■□□□□ 0.48
SHCBP1-205ENST00000566016 APOBEC3DQ96AK3 386 aaPredicted RBP18.07■□□□□ 0.48
SHCBP1-205ENST00000566016 SLAMF6Q96DU3 332 aa18.07■□□□□ 0.48
SHCBP1-205ENST00000566016 IL4I1Q96RQ9 567 aa18.07■□□□□ 0.48
SHCBP1-205ENST00000566016 MBOAT4Q96T53 435 aa18.07■□□□□ 0.48
SHCBP1-205ENST00000566016 SYT3Q9BQG1 590 aa18.07■□□□□ 0.48
SHCBP1-205ENST00000566016 C1QTNF5Q9BXJ0 243 aa18.07■□□□□ 0.48
SHCBP1-205ENST00000566016 OR2J1Q9GZK6 312 aa18.07■□□□□ 0.48
SHCBP1-205ENST00000566016 DCLRE1BQ9H816 532 aa18.07■□□□□ 0.48
SHCBP1-205ENST00000566016 SLCO1C1Q9NYB5 712 aa18.07■□□□□ 0.48
SHCBP1-205ENST00000566016 DUSP13Q9UII6 198 aa18.07■□□□□ 0.48
SHCBP1-205ENST00000566016 GPR160Q9UJ42 338 aa18.07■□□□□ 0.48
SHCBP1-205ENST00000566016 TRIP10Q15642 601 aa18.06■□□□□ 0.48
SHCBP1-205ENST00000566016 MOGQ16653 247 aa18.06■□□□□ 0.48
SHCBP1-205ENST00000566016 MEPCEQ7L2J0 689 aaKnown RBP18.06■□□□□ 0.48
SHCBP1-205ENST00000566016 LRP11Q86VZ4 500 aa18.06■□□□□ 0.48
SHCBP1-205ENST00000566016 PACRGLQ8N7B6 248 aa18.06■□□□□ 0.48
SHCBP1-205ENST00000566016 SLC25A40Q8TBP6 338 aa18.06■□□□□ 0.48
SHCBP1-205ENST00000566016 ABHD6Q9BV23 337 aa18.06■□□□□ 0.48
SHCBP1-205ENST00000566016 YIPF3Q9GZM5 350 aa18.06■□□□□ 0.48
SHCBP1-205ENST00000566016 MS4A5Q9H3V2 200 aa18.06■□□□□ 0.48
SHCBP1-205ENST00000566016 DYNLRB1Q9NP97 96 aa18.06■□□□□ 0.48
SHCBP1-205ENST00000566016 IMPAD1Q9NX62 359 aa18.06■□□□□ 0.48
SHCBP1-205ENST00000566016 HAO2Q9NYQ3 351 aa18.06■□□□□ 0.48
SHCBP1-205ENST00000566016 MYEF2Q9P2K5 600 aaKnown RBP18.06■□□□□ 0.48
SHCBP1-205ENST00000566016 CGGBP1Q9UFW8 167 aaPredicted RBP18.06■□□□□ 0.48
SHCBP1-205ENST00000566016 FZR1Q9UM11 496 aa18.06■□□□□ 0.48
SHCBP1-205ENST00000566016 M0R135 149 aa18.05■□□□□ 0.48
SHCBP1-205ENST00000566016 CASQ2O14958 399 aaPredicted RBP18.05■□□□□ 0.48
SHCBP1-205ENST00000566016 SELENOFO60613 162 aa18.05■□□□□ 0.48
SHCBP1-205ENST00000566016 GCH1P30793 250 aa18.05■□□□□ 0.48
SHCBP1-205ENST00000566016 SLC15A1P46059 708 aa18.05■□□□□ 0.48
SHCBP1-205ENST00000566016 EFNA4P52798 201 aa18.05■□□□□ 0.48
SHCBP1-205ENST00000566016 TPTEP56180 551 aa18.05■□□□□ 0.48
SHCBP1-205ENST00000566016 GRB2P62993 217 aaKnown RBP18.05■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 46.3 ms